BP920275
Clone id YMU001_000135_B03
Library
Length 250
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000135_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTCGGACTCTTTATGCATACACTCCGCATCGCTCGTGGCGAACATTCCAAATGTTCCTGA
TTCTTAGAGTGATCAAAATGTCAGTTTTGGTATGTCCTTGGCATCCGCAAAAACACCACA
TGCACAATTATTTGACATACATAATACTTACCTAGCCCTTTCCACAATGTCACGAAGAAA
ATCCTGAAGTAGACTGAAGCAAACTGATATAATTTTCAACTTATTATCTCCTGGTGGATG
AATGTTTTCC
■■Homology search results ■■ -
sp_hit_id Q8N2E6
Definition sp|Q8N2E6|TOR2X_HUMAN Prosalusin OS=Homo sapiens
Align length 51
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920275|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_B03.
(250 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8N2E6|TOR2X_HUMAN Prosalusin OS=Homo sapiens GN=TOR2A PE=1 SV=1 31 2.2
sp|Q5JU69|TOR2A_HUMAN Torsin-2A OS=Homo sapiens GN=TOR2A PE=2 SV=1 31 2.2
sp|P0C7W1|TOR2X_BOVIN Prosalusin OS=Bos taurus GN=TOR2A PE=3 SV=1 30 3.7
sp|A4FUH1|TOR2A_BOVIN Torsin-2A OS=Bos taurus GN=TOR2A PE=2 SV=1 30 3.7
sp|O91940|L_BRSVA Large structural protein OS=Bovine respiratory... 29 8.3

>sp|Q8N2E6|TOR2X_HUMAN Prosalusin OS=Homo sapiens GN=TOR2A PE=1 SV=1
Length = 242

Score = 30.8 bits (68), Expect = 2.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3

Query: 164 WKGLGKYYVCQIIVHVVF---LRMPRTYQN*HFDHSKNQEHLECSPRAMRS 21
W G GK YV ++ H +F LR PR + H + H+E + ++S
Sbjct: 94 WTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSPVLHFPHPSHIERYKKDLKS 144


>sp|Q5JU69|TOR2A_HUMAN Torsin-2A OS=Homo sapiens GN=TOR2A PE=2 SV=1
Length = 321

Score = 30.8 bits (68), Expect = 2.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3

Query: 164 WKGLGKYYVCQIIVHVVF---LRMPRTYQN*HFDHSKNQEHLECSPRAMRS 21
W G GK YV ++ H +F LR PR + H + H+E + ++S
Sbjct: 94 WTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSPVLHFPHPSHIERYKKDLKS 144


>sp|P0C7W1|TOR2X_BOVIN Prosalusin OS=Bos taurus GN=TOR2A PE=3 SV=1
Length = 242

Score = 30.0 bits (66), Expect = 3.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -3

Query: 164 WKGLGKYYVCQIIVHVVF---LRMPRTYQN*HFDHSKNQEHLECSPRAMRS 21
W G GK YV ++ H +F LR P + H + HLE + ++S
Sbjct: 94 WTGTGKSYVSSLLAHYLFRDGLRSPHVHHFSPVIHFPHPSHLERYKKDLKS 144


>sp|A4FUH1|TOR2A_BOVIN Torsin-2A OS=Bos taurus GN=TOR2A PE=2 SV=1
Length = 321

Score = 30.0 bits (66), Expect = 3.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -3

Query: 164 WKGLGKYYVCQIIVHVVF---LRMPRTYQN*HFDHSKNQEHLECSPRAMRS 21
W G GK YV ++ H +F LR P + H + HLE + ++S
Sbjct: 94 WTGTGKSYVSSLLAHYLFRDGLRSPHVHHFSPVIHFPHPSHLERYKKDLKS 144


>sp|O91940|L_BRSVA Large structural protein OS=Bovine respiratory
syncytial virus (strain A51908) GN=L PE=3 SV=1
Length = 2162

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = +3

Query: 30 RSWRTFQMFLILRVIKMSVLVCPW------HPQKHHMHNYLTYIILT 152
R +F+++ + R+ +VCPW HP HM LTY+ LT
Sbjct: 1599 RGCHSFKLWFLKRLNTSKFIVCPWVVNIDYHPT--HMKAILTYMELT 1643


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920275|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_B03.
(250 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******