BP920284
Clone id YMU001_000135_C03
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000135_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AACTGAAAGAACAGTTGTGGTTTTATTGTCATACATACCCATCACAAGGACATTTTGTAA
CCTCTGTCATGCAGGTCTTTGTCCTATGCAGAAAAATGCAAGACATTTTGTAGTTACCAC
GTCCGCCCCTTGCTTGGTTCAGAGATACCACCCAACCATATCACCCTTCAACAGGGGACC
ATTGAGGAGTTTAGCAGTAAAGGCCAAACCTCTATTGTGGTCAACCACTTCCCCTATGCT
CGTAAACAACCCCACCTTGACACTGAGCATCCAAAATCATATGCACGCACTATGCAATGA
AGTAATGCTGTTATCTGCCAGGGAATTCACAAACTTTCTTTTAGAAGACCTTTCATGTCC
TCAGCAACTGAGTTGAAGCACTTTGACAAATTCCCAAAATGTTGATGTTCCAGATTGGCC
CTTCCATTTCTTCCAATGGCAATATCAGCATCGCTTAGCCTTTCATGGGGCAACGTGAGT
GAAATGTAACACTGTCCATGCCACCCATAAGGACAGTTATCTCTAGATTAG
■■Homology search results ■■ -
sp_hit_id A5IHA2
Definition sp|A5IHA2|ARLY_LEGPC Argininosuccinate lyase OS=Legionella pneumophila (strain Corby)
Align length 49
Score (bit) 31.2
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920284|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_C03.
(518 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A5IHA2|ARLY_LEGPC Argininosuccinate lyase OS=Legionella pneum... 31 3.0
sp|Q5X7P8|ARLY_LEGPA Argininosuccinate lyase OS=Legionella pneum... 31 3.0
sp|P22967|ACET_MOUSE Angiotensin-converting enzyme, testis-speci... 31 4.0
sp|A7HC45|MUTL_ANADF DNA mismatch repair protein mutL OS=Anaerom... 30 6.8
sp|Q5WZ49|ARLY_LEGPL Argininosuccinate lyase OS=Legionella pneum... 30 6.8
sp|Q5ZY77|ARLY_LEGPH Argininosuccinate lyase OS=Legionella pneum... 30 6.8
sp|Q9HBW1|LRRC4_HUMAN Leucine-rich repeat-containing protein 4 O... 30 8.8

>sp|A5IHA2|ARLY_LEGPC Argininosuccinate lyase OS=Legionella
pneumophila (strain Corby) GN=argH PE=3 SV=1
Length = 411

Score = 31.2 bits (69), Expect = 3.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1

Query: 256 IQNHMHALCNEVMLLSAREFTNFLLEDLSCPQQLS*STLTNSQNVDVPD 402
I H+ LC +++L S +EF +L+D S + N +N DVP+
Sbjct: 247 IMMHLSRLCEDLILWSTQEFNFVILDDAFATGS---SLMPNKKNPDVPE 292


>sp|Q5X7P8|ARLY_LEGPA Argininosuccinate lyase OS=Legionella
pneumophila (strain Paris) GN=argH PE=3 SV=1
Length = 411

Score = 31.2 bits (69), Expect = 3.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1

Query: 256 IQNHMHALCNEVMLLSAREFTNFLLEDLSCPQQLS*STLTNSQNVDVPD 402
I H+ LC +++L S +EF +L+D S + N +N DVP+
Sbjct: 247 IMMHLSRLCEDLILWSTQEFNFVILDDAFATGS---SLMPNKKNPDVPE 292


>sp|P22967|ACET_MOUSE Angiotensin-converting enzyme, testis-specific
isoform OS=Mus musculus GN=Ace PE=1 SV=1
Length = 732

Score = 30.8 bits (68), Expect = 4.0
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = +3

Query: 96 CSYHVRPLLGSEIPPNHITLQQGTIEEFSSKGQTSIVVNHFPYARKQPHLDTEHPKS--- 266
C +H+ L+ S++ +H+T QG + +++ QT+ + P+L+T+ K+
Sbjct: 20 CGHHL--LVLSQVATDHVTANQGITNQATTRSQTTTHQATIDQTTQIPNLETDEAKADRF 77

Query: 267 ---YARTMQ 284
Y RT Q
Sbjct: 78 VEEYDRTAQ 86


>sp|A7HC45|MUTL_ANADF DNA mismatch repair protein mutL
OS=Anaeromyxobacter sp. (strain Fw109-5) GN=mutL PE=3
SV=1
Length = 601

Score = 30.0 bits (66), Expect = 6.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3

Query: 510 EITVLMGGMDSVTFHSRCPMKG*AMLILPLEEME 409
E L+ G+D++ F +RCP + LPL E+E
Sbjct: 562 EARALLDGLDAIDFKARCPHGRPVVFELPLAELE 595


>sp|Q5WZ49|ARLY_LEGPL Argininosuccinate lyase OS=Legionella
pneumophila (strain Lens) GN=argH PE=3 SV=1
Length = 411

Score = 30.0 bits (66), Expect = 6.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1

Query: 256 IQNHMHALCNEVMLLSAREFTNFLLEDLSCPQQLS*STLTNSQNVDVPD 402
I H+ LC +++L S +EF L+D S + N +N DVP+
Sbjct: 247 IMMHLSRLCEDLILWSTQEFNFVTLDDAFATGS---SLMPNKKNPDVPE 292


>sp|Q5ZY77|ARLY_LEGPH Argininosuccinate lyase OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=argH PE=3 SV=2
Length = 411

Score = 30.0 bits (66), Expect = 6.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1

Query: 256 IQNHMHALCNEVMLLSAREFTNFLLEDLSCPQQLS*STLTNSQNVDVPD 402
I H+ LC +++L S +EF L+D S + N +N DVP+
Sbjct: 247 IMMHLSRLCEDLILWSTQEFNFVTLDDAFATGS---SLMPNKKNPDVPE 292


>sp|Q9HBW1|LRRC4_HUMAN Leucine-rich repeat-containing protein 4
OS=Homo sapiens GN=LRRC4 PE=1 SV=2
Length = 653

Score = 29.6 bits (65), Expect = 8.8
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Frame = +1

Query: 10 LLSYIPITRTFCNLCHAGLCPMQKNARHFV------VTTSAPCLVQRYHPTISPFNRGPL 171
L YIP T C CHA PM R+ V SAP ++ P + G +
Sbjct: 315 LREYIPTNSTCCGRCHA---PMHMRGRYLVEVDQASFQCSAPFIMDA--PRDLNISEGRM 369

Query: 172 RSLAVKAKPLLWSTTSPMLVNNPTLTLSIQNHMHALCNEVMLLSAREFTNFLLED 336
L + P+ S+ +L N L+ + ++ ++ N+ L F++ LL D
Sbjct: 370 AELKCRTPPM--SSVKWLLPNGTVLSHASRHPRISVLNDGTL----NFSHVLLSD 418


tr_hit_id B7YQF4
Definition tr|B7YQF4|B7YQF4_VARPD ABC transporter related protein OS=Variovorax paradoxus S110
Align length 62
Score (bit) 34.3
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920284|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_C03.
(518 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7YQF4|B7YQF4_VARPD ABC transporter related protein OS=Variov... 34 3.8
tr|A7HCT3|A7HCT3_ANADF Cell surface receptor IPT/TIG domain prot... 34 5.0
tr|A4HUR2|A4HUR2_LEIIN Chromosome 10 (Fragment) OS=Leishmania in... 33 6.5
tr|Q6C859|Q6C859_YARLI Serine hydroxymethyltransferase OS=Yarrow... 33 6.5
tr|B5S1P3|B5S1P3_RALSO Aspartate/tyrosine/aromatic aminotransfer... 33 8.5
tr|Q8ZTY2|Q8ZTY2_PYRAE Putative uncharacterized protein PAE3035 ... 33 8.5

>tr|B7YQF4|B7YQF4_VARPD ABC transporter related protein
OS=Variovorax paradoxus S110 GN=VaparDRAFT_3329 PE=4
SV=1
Length = 613

Score = 34.3 bits (77), Expect = 3.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -1

Query: 344 HERSSKRKFVNSLADNSITSLHSACI*FWMLSVKVGLFTSIGEVVDHNRGLAFTAKLLNG 165
++R R V++LA L CI FW+ S + L + G ++DH A +LN
Sbjct: 63 YDRVLSRSGVSTLAALVCGILFFLCIEFWLRSGRSRLLRNAGAIIDHGVSGALLHSMLNR 122

Query: 164 PL 159
PL
Sbjct: 123 PL 124


>tr|A7HCT3|A7HCT3_ANADF Cell surface receptor IPT/TIG domain protein
OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2327
PE=4 SV=1
Length = 12684

Score = 33.9 bits (76), Expect = 5.0
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +3

Query: 54 SCRSLSYAEKCKTFCSYHVRPLLGSEIPPNHITLQQGTIEEFSSKGQTSIVVNHFPYARK 233
SCR+ + C++FC+ +V P G ++ + ++ F + G +S +++PYA +
Sbjct: 10048 SCRTSYSNDDCQSFCAEYVVPASG------NVLVSAEALDVFGASGTSS--YSYYPYANQ 10099

Query: 234 QPHLDTEHPKSY 269
P + + Y
Sbjct: 10100 PPSVSMSERRDY 10111


>tr|A4HUR2|A4HUR2_LEIIN Chromosome 10 (Fragment) OS=Leishmania
infantum GN=LinJ10.1830 PE=4 SV=1
Length = 1224

Score = 33.5 bits (75), Expect = 6.5
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3

Query: 138 PNHITLQQGTIEEFSSKGQTSIVVNHFPYARKQPHLDTEHPKSYARTMQ*SNAVICQGIH 317
P ++ G E +G ++ H A K P LD H + + ++ S V +H
Sbjct: 215 PQRVSAAGGGRLELRMRGLVALPCLHLSAAPKSPSLDARHESTTSSSVHGSGDVAAGRLH 274

Query: 318 KLSFRRPFMSS 350
+SFR+ +SS
Sbjct: 275 AVSFRQNAISS 285


>tr|Q6C859|Q6C859_YARLI Serine hydroxymethyltransferase OS=Yarrowia
lipolytica GN=YALI0D22484g PE=3 SV=1
Length = 481

Score = 33.5 bits (75), Expect = 6.5
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1

Query: 124 VQRYHPTISPFNRGPLRSLAVKAKPLLWSTTSPMLVNNPTLTLSIQNHMHALCNEVMLLS 303
+QR+ P NRG LR+ A KA P T + ++P + I+ + L+
Sbjct: 1 MQRFTRLSRPLNRGLLRAYATKASPDTQMTQQTLYASDPEIADIIKKETDRQIGSITLIP 60

Query: 304 AREFTN 321
+ FT+
Sbjct: 61 SENFTS 66


>tr|B5S1P3|B5S1P3_RALSO Aspartate/tyrosine/aromatic aminotransferase
protein OS=Ralstonia solanacearum MolK2 GN=RSMK01033
PE=4 SV=1
Length = 381

Score = 33.1 bits (74), Expect = 8.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1

Query: 115 PCLVQRYHPTISPFNRGPLRSLAVKAKPLLWSTTSPMLVNNPTLTLSIQNHMHALCNEVM 294
P L+ R+H + P G + SL + A WS P L + +H+HA+ + V
Sbjct: 243 PALMHRFHARLPPRLTGAVNSLGIDATVAAWSEGQPWLD-------VVLDHLHAMRDYVA 295

Query: 295 LLSAREF 315
REF
Sbjct: 296 DALRREF 302


>tr|Q8ZTY2|Q8ZTY2_PYRAE Putative uncharacterized protein PAE3035
OS=Pyrobaculum aerophilum GN=PAE3035 PE=4 SV=1
Length = 160

Score = 33.1 bits (74), Expect = 8.5
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1

Query: 28 ITRTFCNLCHAGLCPMQKNARHFVVT---TSAPCLVQRYHPTISPFNRGPLRSLAVK 189
+ R + HAG+ +K A+H+VV TS P +V I PF+RG L L ++
Sbjct: 89 LIRPIVKIRHAGV--QKKRAQHYVVVQFLTSHPAIVTEDFVQIGPFSRGDLAKLPLR 143