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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920288
Clone id YMU001_000135_C07
Library
Length 264
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000135_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TATGTGCTCTACTCATTAAAAATAAATTGTCAAGCCCTCCAAAGAGTCTACGCACAATTC
CGTCCTCTACTACAGAGAGAGGATTCTCCTGAGCACTTCTTCCACACGAGAGACTAAGTG
CTAAATCTCTTCCAAACCATCGGAAGCTCTAAGCTTTCAAGGGTCCTAATGCACTCTCCT
ACCAAGAGTGCTCGCACGGGTCCTGGTGCATTCCATTACCGCGTATGGTAGCACGAGACT
CTAATTCGGAGAGTCTAAGTCTCC
■■Homology search results ■■ -
sp_hit_id Q9RKB9
Definition sp|Q9RKB9|TRI2_STRCO Putative tricorn protease homolog 2 OS=Streptomyces coelicolor
Align length 61
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920288|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_C07.
         (264 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9RKB9|TRI2_STRCO Putative tricorn protease homolog 2 OS=Stre...    31   1.7  
sp|Q8NYA3|U409_STAAW UPF0409 lipoprotein OS=Staphylococcus aureu...    30   3.8  
sp|Q6GCC9|U409_STAAS UPF0409 lipoprotein OS=Staphylococcus aureu...    30   3.8  
sp|Q6GJX5|U409_STAAR UPF0409 lipoprotein OS=Staphylococcus aureu...    30   3.8  
sp|Q7A7M3|U409_STAAN UPF0409 lipoprotein OS=Staphylococcus aureu...    30   3.8  
sp|Q99WN4|U409_STAAM UPF0409 lipoprotein OS=Staphylococcus aureu...    30   3.8  
sp|Q5HIV1|U409_STAAC UPF0409 lipoprotein OS=Staphylococcus aureu...    30   3.8  
sp|Q2YVG5|U409_STAAB UPF0409 lipoprotein OS=Staphylococcus aureu...    30   3.8  
sp|Q2G131|U409_STAA8 UPF0409 lipoprotein OS=Staphylococcus aureu...    30   3.8  
sp|Q2FJS0|U409_STAA3 UPF0409 lipoprotein OS=Staphylococcus aureu...    30   3.8  
sp|Q3K959|YEGS_PSEPF Probable lipid kinase yegS-like OS=Pseudomo...    29   6.5  
sp|Q4K8Y4|YEGS_PSEF5 Probable lipid kinase yegS-like OS=Pseudomo...    29   8.5  
sp|Q0VSB2|YEGS_ALCBS Probable lipid kinase yegS-like OS=Alcanivo...    29   8.5  

>sp|Q9RKB9|TRI2_STRCO Putative tricorn protease homolog 2
           OS=Streptomyces coelicolor GN=tri2 PE=3 SV=1
          Length = 1171

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = +1

Query: 46  VYAQFRPLLQREDSPEHFFHTRD*VLNLFQTIGSSKLSRVLMHSPTKSARTGPGAFHYRV 225
           V  Q+RPLL+R  SP+ F    D +  +   +G+S       H+   +AR   G  HY+ 
Sbjct: 795 VLDQYRPLLERVASPDEF---ADLLREVLGELGTS-------HAYVVAARRNEGPAHYQR 844

Query: 226 W 228
           W
Sbjct: 845 W 845


>sp|Q8NYA3|U409_STAAW UPF0409 lipoprotein OS=Staphylococcus aureus
           (strain MW2) GN=MW0319 PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 7   LYSLKINCQALQRVYAQFRPLLQRED 84
           LY  K N +  Q++Y  F+P+L+++D
Sbjct: 198 LYDFKANIEGAQKIYDLFKPILEKKD 223


>sp|Q6GCC9|U409_STAAS UPF0409 lipoprotein OS=Staphylococcus aureus
           (strain MSSA476) GN=SAS0319 PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 7   LYSLKINCQALQRVYAQFRPLLQRED 84
           LY  K N +  Q++Y  F+P+L+++D
Sbjct: 198 LYDFKANIEGAQKIYDLFKPILEKKD 223


>sp|Q6GJX5|U409_STAAR UPF0409 lipoprotein OS=Staphylococcus aureus
           (strain MRSA252) GN=SAR0340 PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 7   LYSLKINCQALQRVYAQFRPLLQRED 84
           LY  K N +  Q++Y  F+P+L+++D
Sbjct: 198 LYDFKANVEGAQKIYDLFKPILEKKD 223


>sp|Q7A7M3|U409_STAAN UPF0409 lipoprotein OS=Staphylococcus aureus
           (strain N315) GN=SA0331 PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 7   LYSLKINCQALQRVYAQFRPLLQRED 84
           LY  K N +  Q++Y  F+P+L+++D
Sbjct: 198 LYDFKANVEGAQKIYDLFKPILEKKD 223


>sp|Q99WN4|U409_STAAM UPF0409 lipoprotein OS=Staphylococcus aureus
           (strain Mu50 / ATCC 700699) GN=SAV0343 PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 7   LYSLKINCQALQRVYAQFRPLLQRED 84
           LY  K N +  Q++Y  F+P+L+++D
Sbjct: 198 LYDFKANVEGAQKIYDLFKPILEKKD 223


>sp|Q5HIV1|U409_STAAC UPF0409 lipoprotein OS=Staphylococcus aureus
           (strain COL) GN=SACOL0414 PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 7   LYSLKINCQALQRVYAQFRPLLQRED 84
           LY  K N +  Q++Y  F+P+L+++D
Sbjct: 198 LYDFKANVEGAQKIYDLFKPILEKKD 223


>sp|Q2YVG5|U409_STAAB UPF0409 lipoprotein OS=Staphylococcus aureus
           (strain bovine RF122 / ET3-1) GN=SAB0293 PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 7   LYSLKINCQALQRVYAQFRPLLQRED 84
           LY  K N +  Q++Y  F+P+L+++D
Sbjct: 198 LYDFKANVEGAQKIYDLFKPILEKKD 223


>sp|Q2G131|U409_STAA8 UPF0409 lipoprotein OS=Staphylococcus aureus
           (strain NCTC 8325) GN=SAOUHSC_00325 PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 7   LYSLKINCQALQRVYAQFRPLLQRED 84
           LY  K N +  Q++Y  F+P+L+++D
Sbjct: 198 LYDFKANVEGAQKIYDLFKPILEKKD 223


>sp|Q2FJS0|U409_STAA3 UPF0409 lipoprotein OS=Staphylococcus aureus
           (strain USA300) GN=SAUSA300_0344 PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 7   LYSLKINCQALQRVYAQFRPLLQRED 84
           LY  K N +  Q++Y  F+P+L+++D
Sbjct: 198 LYDFKANVEGAQKIYDLFKPILEKKD 223
tr_hit_id A6CC80
Definition tr|A6CC80|A6CC80_9PLAN Probable serine/threonine-protein kinase pknB OS=Planctomyces maris DSM 8797
Align length 68
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920288|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_C07.
         (264 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6CC80|A6CC80_9PLAN Probable serine/threonine-protein kinase ...    35   2.4  

>tr|A6CC80|A6CC80_9PLAN Probable serine/threonine-protein kinase
           pknB OS=Planctomyces maris DSM 8797 GN=PM8797T_31810
           PE=4 SV=1
          Length = 562

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/68 (30%), Positives = 36/68 (52%)
 Frame = +1

Query: 1   YVLYSLKINCQALQRVYAQFRPLLQREDSPEHFFHTRD*VLNLFQTIGSSKLSRVLMHSP 180
           Y+  S + +C +LQ +  + +PL+   DS EH   +R+   +L +++G       L+HS 
Sbjct: 22  YLQNSDQESCHSLQSINPELKPLMVCLDSLEHLAPSREESDHLAESLGPD--DATLIHSA 79

Query: 181 TKSARTGP 204
             S RT P
Sbjct: 80  ESSRRTAP 87