BP920291 |
Clone id |
YMU001_000135_C10 |
Library |
YMU01 |
Length |
361 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000135_C10. |
Accession |
BP920291 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL36Contig1 |
Sequence |
GTCAATATCCTCTACATCATGCTAATGTCTTTAAATCAAAATTTCATTTTGCATCTGCGT TCAGGCTTATATTGTCATTCCCAGAGTACAGACATTTCATGCAGAGACAGCAGCTGACAG AAACGCTCTTCCTGGCTTCCTTGCAGAAAGCAATCCATGGCATCCAAGAAGCTTGGCATT GACACCATCATTAACAATTCTGTTCTCTTCCTTCCACTTCAAGTAGTCAGTTCGAGAAAA TTTGGTGAATCCCCATTTTCGGCTCACAATAATCTTCTGCCTTCCAGGAAATTTGAACTT AGCGCGACGCAAGGCCTCCTGGGCATGTATACCATTATTGTCCTTGCAGCGGACGCTCAA T |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40592 |
Definition |
sp|Q40592|RL10_TOBAC 60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum |
Align length |
83 |
Score (bit) |
148.0 |
E-value |
1.0e-35 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3TLM0 |
Definition |
tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var. tenera |
Align length |
86 |
Score (bit) |
158.0 |
E-value |
1.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920291|Adiantum capillus-veneris mRNA, clone: YMU001_000135_C10. (361 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 158 1e-37 tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 154 2e-36 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 154 3e-36 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 153 4e-36 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 153 4e-36 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 152 6e-36 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 152 6e-36 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 152 6e-36 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 152 8e-36 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 147 3e-34 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 144 2e-33 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 144 2e-33 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 144 3e-33 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 143 4e-33 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 141 1e-32 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 140 4e-32 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 137 3e-31 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 137 4e-31 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 137 4e-31 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 137 4e-31 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 136 5e-31 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 134 2e-30 tr|Q93VL0|Q93VL0_ARATH At1g14320/F14L17_28 OS=Arabidopsis thalia... 130 3e-29 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 129 7e-29 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 129 7e-29 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 127 2e-28 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 117 4e-25 tr|Q0DS57|Q0DS57_ORYSJ Os03g0332500 protein OS=Oryza sativa subs... 117 4e-25 tr|A2XGB9|A2XGB9_ORYSI Putative uncharacterized protein OS=Oryza... 115 1e-24 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 109 6e-23
>tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 158 bits (399), Expect = 1e-37 Identities = 75/86 (87%), Positives = 81/86 (94%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD+N HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWK ENRI+ DGV Sbjct: 136 LSVRCKDSNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKSENRIIPDGV 195
Query: 180 NAKLLGCHGLLSARKPGRAFLSAAVS 103 NAKLLGCHG L+AR+PG+AFLSAAV+ Sbjct: 196 NAKLLGCHGPLAARQPGKAFLSAAVT 221
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 154 bits (390), Expect = 2e-36 Identities = 73/87 (83%), Positives = 79/87 (90%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD NG HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR DY+KWK+ENRI+ DGV Sbjct: 136 LSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYVKWKQENRIMPDGV 195
Query: 180 NAKLLGCHGLLSARKPGRAFLSAAVSA 100 NAKLLGCHG L+ R+PGRAFLS AV + Sbjct: 196 NAKLLGCHGPLAQRQPGRAFLSGAVES 222
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 154 bits (388), Expect = 3e-36 Identities = 71/86 (82%), Positives = 78/86 (90%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R DY+KWKEENR+VNDGV Sbjct: 136 LSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVDYVKWKEENRLVNDGV 195
Query: 180 NAKLLGCHGLLSARKPGRAFLSAAVS 103 AKLLGCHG L+ R GRAF+ AAV+ Sbjct: 196 TAKLLGCHGPLAQRSAGRAFIDAAVA 221
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 153 bits (387), Expect = 4e-36 Identities = 71/86 (82%), Positives = 78/86 (90%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R DY+KWKEENR+VNDGV Sbjct: 136 LSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVDYVKWKEENRLVNDGV 195
Query: 180 NAKLLGCHGLLSARKPGRAFLSAAVS 103 AKLLGCHG L+ R GRAF+ AAV+ Sbjct: 196 TAKLLGCHGPLANRSAGRAFIDAAVA 221
>tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111565 PE=4 SV=1 Length = 219
Score = 153 bits (387), Expect = 4e-36 Identities = 71/86 (82%), Positives = 78/86 (90%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R DY+KWKEENR+VNDGV Sbjct: 132 LSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVDYVKWKEENRLVNDGV 191
Query: 180 NAKLLGCHGLLSARKPGRAFLSAAVS 103 AKLLGCHG L+ R GRAF+ AAV+ Sbjct: 192 TAKLLGCHGPLANRSAGRAFIDAAVA 217
>tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lycopersicum GN=ACI29 PE=2 SV=1 Length = 220
Score = 152 bits (385), Expect = 6e-36 Identities = 74/84 (88%), Positives = 77/84 (91%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLK+K ENRIV DGV Sbjct: 136 LSVRCKDGNANHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGV 195
Query: 180 NAKLLGCHGLLSARKPGRAFLSAA 109 NAKLLGCHG L+AR+PGRAFL AA Sbjct: 196 NAKLLGCHGRLAARQPGRAFLEAA 219
>tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS=Solanum tuberosum PE=2 SV=1 Length = 220
Score = 152 bits (385), Expect = 6e-36 Identities = 74/84 (88%), Positives = 77/84 (91%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLK+K ENRIV DGV Sbjct: 136 LSVRCKDGNANHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGV 195
Query: 180 NAKLLGCHGLLSARKPGRAFLSAA 109 NAKLLGCHG L+AR+PGRAFL AA Sbjct: 196 NAKLLGCHGRLAARQPGRAFLEAA 219
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 152 bits (385), Expect = 6e-36 Identities = 71/86 (82%), Positives = 77/86 (89%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R DY+KWKEENR+VNDGV Sbjct: 136 LSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVDYVKWKEENRLVNDGV 195
Query: 180 NAKLLGCHGLLSARKPGRAFLSAAVS 103 AKLLGCHG L R GRAF+ AAV+ Sbjct: 196 TAKLLGCHGPLGNRTAGRAFIDAAVA 221
>tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 152 bits (384), Expect = 8e-36 Identities = 71/86 (82%), Positives = 77/86 (89%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD N HAQEALRRAKFKFPGRQKII+SRKWGFTKF+RTDYL+WK ENRIV DGV Sbjct: 136 LSVRCKDGNSNHAQEALRRAKFKFPGRQKIIISRKWGFTKFNRTDYLRWKSENRIVPDGV 195
Query: 180 NAKLLGCHGLLSARKPGRAFLSAAVS 103 NAKLLGCHG LSAR+PGRAFL ++ Sbjct: 196 NAKLLGCHGRLSARQPGRAFLPPTIA 221
>tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023920001 PE=4 SV=1 Length = 231
Score = 147 bits (371), Expect = 3e-34 Identities = 68/83 (81%), Positives = 76/83 (91%) Frame = -2
Query: 360 LSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKWKEENRIVNDGV 181 LSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RTDY+KWK ENRI+ DGV Sbjct: 147 LSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYIKWKSENRILPDGV 206
Query: 180 NAKLLGCHGLLSARKPGRAFLSA 112 NAKLLGCHG L+ R+PG+AF++A Sbjct: 207 NAKLLGCHGPLANRQPGKAFINA 229
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