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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920303
Clone id YMU001_000135_E01
Library
Length 493
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000135_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAAGCCAGGATTTACAGGGTCTTTAGTGCATCTTTGACGGCCGGCCTGGTCATCCTTACA
ATGCCAGCAGTCAAAAGACAAGACTGGCCACCCGCATGTCTGTCTATGCACAAAAAACTT
CATTTGGGTACTACCTTTGTAAGGTGGGTACGCCAAAGTAATTTACATCGCAAAATTTGG
AAGGTGCTTTCCTTCGGCTCTGCTCTGAAAAAGTTGTTAATGACCGCTGACATGATTGTC
ATAAAACAGAGCATTCATGCTTTTGAAGGGTGAAAGGAGACCCACCCAAAATTACCATCT
TCCATGTCCTTACTGGCTGACCTTCACCTGGAGCCCTCCATGTTCACACTCTCCATTAGC
CTCTGCCTTTTGCTGACGTAAGGCTGTATGACTTTAATCTTGTCAGGCTTGGATGTCTCT
AAGCTTAACGACCTTTCAGCTTCAAACTCTTTTCTTGTCTCTCTTCGGCTCCCGCTCTGC
CAAACTCCACCAA
■■Homology search results ■■ -
sp_hit_id O15021
Definition sp|O15021|MAST4_HUMAN Microtubule-associated serine/threonine-protein kinase 4 OS=Homo sapiens
Align length 52
Score (bit) 30.0
E-value 6.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920303|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_E01.
         (493 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O15021|MAST4_HUMAN Microtubule-associated serine/threonine-pr...    30   6.0  
sp|Q8WMV1|ERG24_BOVIN Delta(14)-sterol reductase OS=Bos taurus G...    30   6.0  
sp|O14014|RGA3_SCHPO Probable Rho-type GTPase-activating protein...    30   7.8  

>sp|O15021|MAST4_HUMAN Microtubule-associated serine/threonine-protein
            kinase 4 OS=Homo sapiens GN=MAST4 PE=1 SV=3
          Length = 2626

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = -1

Query: 265  QKHECSVL*QSCQRSLTTFSEQSRRKAPSKFCDVNYFGVPTLQR*YPNEVFC 110
            +KH   V  +  QR      EQS+R+AP +  D N   VP L R  P E  C
Sbjct: 1467 RKHSLEVTQEEVQR------EQSQREAPLQSLDENVCDVPPLSRARPVEQGC 1512


>sp|Q8WMV1|ERG24_BOVIN Delta(14)-sterol reductase OS=Bos taurus
           GN=TM7SF2 PE=1 SV=1
          Length = 418

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 156 LAYPPYKGSTQMKFFV-HRQTCGWPVLSFDC 67
           LA+ P+  S Q +F + H Q  GWP+ SF C
Sbjct: 264 LAWVPFTYSLQAQFLLYHPQPLGWPLASFIC 294


>sp|O14014|RGA3_SCHPO Probable Rho-type GTPase-activating protein 3
           OS=Schizosaccharomyces pombe GN=rga3 PE=2 SV=1
          Length = 969

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -3

Query: 461 ETRKEFEAERSLSLETSKPDKIKVIQPYVSKRQRLMES--VNMEGSR*RSASKDMEDGN 291
           ET+   E+ +SLS+E   P K   + P+   R RL+     NM  +   +   D +D N
Sbjct: 157 ETKSSVESNKSLSIEIMSPQK-PPLSPFGGSRDRLVSETPTNMSQAEGGNVPNDGQDSN 214
tr_hit_id Q60D05
Definition tr|Q60D05|Q60D05_SOLDE Putative uncharacterized protein OS=Solanum demissum
Align length 45
Score (bit) 48.1
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920303|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_E01.
         (493 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q60D05|Q60D05_SOLDE Putative uncharacterized protein OS=Solan...    48   2e-04
tr|Q8L3Y4|Q8L3Y4_ARATH Putative uncharacterized protein At4g2490...    47   6e-04
tr|Q0J0K4|Q0J0K4_ORYSJ Os09g0506900 protein OS=Oryza sativa subs...    46   0.001
tr|A3C0G1|A3C0G1_ORYSJ Putative uncharacterized protein OS=Oryza...    46   0.001
tr|Q9SW36|Q9SW36_ARATH Putative uncharacterized protein F13M23.4...    45   0.002
tr|A9RKQ0|A9RKQ0_PHYPA Predicted protein OS=Physcomitrella paten...    43   0.009
tr|A2Z2X0|A2Z2X0_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.099
tr|A1IVQ4|A1IVQ4_9ACTO Aminopeptidase N OS=Propionibacterium jen...    33   7.1  
tr|Q0IG42|Q0IG42_AEDAE Putative uncharacterized protein OS=Aedes...    33   7.1  
tr|A0D9A6|A0D9A6_PARTE Chromosome undetermined scaffold_42, whol...    33   7.1  
tr|Q9L131|Q9L131_STRCO Flavohemoprotein OS=Streptomyces coelicol...    33   7.3  
tr|Q9LXN3|Q9LXN3_ARATH Acyl CoA reductase-protein OS=Arabidopsis...    33   7.3  
tr|Q2V3Q9|Q2V3Q9_ARATH Uncharacterized protein At3g44540.2 (At3g...    33   7.3  
tr|B3L6X1|B3L6X1_PLAKH Putative uncharacterized protein OS=Plasm...    33   9.3  

>tr|Q60D05|Q60D05_SOLDE Putative uncharacterized protein OS=Solanum
           demissum GN=SDM1_56t00018 PE=4 SV=2
          Length = 418

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
 Frame = -3

Query: 491 GGVWQSGSRRETRKEFEAERSLSLET-SKPDKIKVIQPYVSKRQR 360
           G VWQSG+R+E+RKEF+ E   S E  S+   +  +QPYVSKR+R
Sbjct: 365 GRVWQSGTRKESRKEFQLENHKSSEVESQSQSMVQLQPYVSKRKR 409


>tr|Q8L3Y4|Q8L3Y4_ARATH Putative uncharacterized protein At4g24900
           OS=Arabidopsis thaliana GN=At4g24900 PE=2 SV=1
          Length = 203

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
 Frame = -3

Query: 491 GGVWQSGSRRETRKEFEAERSLSLET------SKPDKIKVIQPYVSKRQR 360
           G VWQSG+R+E+RKEFE E+   ++T      S+P K   IQPY+SKR R
Sbjct: 152 GRVWQSGTRKESRKEFEKEKRKLVKTESISTESEPVK---IQPYISKRAR 198


>tr|Q0J0K4|Q0J0K4_ORYSJ Os09g0506900 protein OS=Oryza sativa subsp.
           japonica GN=Os09g0506900 PE=4 SV=1
          Length = 176

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = -3

Query: 491 GGVWQSGSRRETRKEFEAERSLSLETSKPDKIKVIQPYVSKRQRL 357
           GGVWQSG+R+E+RKEFE       E S    ++ ++PY+SKR R+
Sbjct: 119 GGVWQSGTRKESRKEFEKNHKPHEEKSNKLSLE-MKPYISKRMRV 162


>tr|A3C0G1|A3C0G1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_028783 PE=4 SV=1
          Length = 425

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = -3

Query: 491 GGVWQSGSRRETRKEFEAERSLSLETSKPDKIKVIQPYVSKRQRL 357
           GGVWQSG+R+E+RKEFE       E S    ++ ++PY+SKR R+
Sbjct: 368 GGVWQSGTRKESRKEFEKNHKPHEEKSNKLSLE-MKPYISKRMRV 411


>tr|Q9SW36|Q9SW36_ARATH Putative uncharacterized protein F13M23.40
           (Putative uncharacterized protein AT4g24900)
           OS=Arabidopsis thaliana GN=AT4g24900 PE=4 SV=1
          Length = 423

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 6/48 (12%)
 Frame = -3

Query: 491 GGVWQSGSRRETRKEFEAERSLSLET------SKPDKIKVIQPYVSKR 366
           G VWQSG+R+E+RKEFE E+   ++T      S+P K   IQPY+SKR
Sbjct: 370 GRVWQSGTRKESRKEFEKEKRKLVKTESISTESEPVK---IQPYISKR 414


>tr|A9RKQ0|A9RKQ0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_67446 PE=4 SV=1
          Length = 509

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
 Frame = -3

Query: 491 GGVWQSGSRRETRKEFEAE-----RSLSLETSKPDKIKV-----IQPYVSKRQ 363
           G VWQSGSR +TR+EFEAE     + L+ E  K     V      QPYVSKR+
Sbjct: 455 GRVWQSGSRHDTRREFEAEKRREAKRLASELGKRTVTSVEGPVQFQPYVSKRR 507


>tr|A2Z2X0|A2Z2X0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31964 PE=4 SV=1
          Length = 398

 Score = 39.3 bits (90), Expect = 0.099
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -3

Query: 491 GGVWQSGSRRETRKEFEAERSLS 423
           GGVWQSG+R+E+RKEFE   SL+
Sbjct: 368 GGVWQSGTRKESRKEFEKNHSLT 390


>tr|A1IVQ4|A1IVQ4_9ACTO Aminopeptidase N OS=Propionibacterium
           jensenii GN=pepN PE=4 SV=1
          Length = 864

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = -3

Query: 443 EAERSLSLETSKPDKIKVIQPYVSKRQRLMESVNMEGSR*RSASKDMEDGNFGWV 279
           E  RS+    + PD+ +V++PY +K  +L E++N E  + R A          W+
Sbjct: 760 ETYRSIVSHFNNPDQEEVLKPYAAKYLQLCEAINSEEGQWREAGHAQVQNALQWL 814


>tr|Q0IG42|Q0IG42_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL003549 PE=4 SV=1
          Length = 536

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = -3

Query: 449 EFEAERSLSLETSKPDKIKVIQPYVSKRQRLMESVNMEGSR*RSAS---KDMEDG 294
           E EA  S S +T+  + IK+ Q ++S  ++L  S N EGS+  S S   + ++DG
Sbjct: 326 ELEAVESWSAKTADEESIKIEQSFLSNLEKLRLSFNPEGSKIVSPSVLHRQVDDG 380


>tr|A0D9A6|A0D9A6_PARTE Chromosome undetermined scaffold_42, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00014553001 PE=4 SV=1
          Length = 335

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -3

Query: 248 CFMTIMSAVINNFFRAEPKESTFQILRCKLLWRTH 144
           CFM +M+++ NNF   + K  TFQ L  K+ W+ H
Sbjct: 198 CFMILMTSLKNNFQLQKEKVRTFQDLLKKVDWKLH 232