BP920313
Clone id YMU001_000135_F02
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000135_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGTTTACTGAATGTGGCATGGTAATGGTGGCGGAATCTAGCTGTAATAACAGTATGTGTA
GTCAAGCTGGCCAGGTCCCCTCTTTAGTGGTGGTTGACAAGGGCCGGGAGGCTCGGGTGT
TGCGGTATAAAGAGAAACGTCGCACCAGGTTGTTCTCGAAGAGGATTCGATATGAGGTCC
GTAAGCTTAATGCAGAAAGGCGACCTCGAATGAAGGGTCGATTTGTGAAAAGGGCAGCGA
TTGCTGCCTTAGCTGCCATGTAGATGTCTACAGCTCCGCATGCAAAACTTAGCAGAAAAC
TTAAGCTTTTTGTCAACTGGTCTTATCTCCAAGAAGAAGACGAGAACAACAAGAGCAGGG
AAACTCCCTGGCGCACATGTATGGTATGTAACATATTTATATATGCACAGGAAATTGAAT
ACGGCGTAGTTGGAGGAGATGAGAGGAGTTAGGAATG
■■Homology search results ■■ -
sp_hit_id Q8RWD0
Definition sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
Align length 55
Score (bit) 87.8
E-value 2.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920313|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_F02.
(457 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Ar... 88 2e-17
sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arab... 86 1e-16
sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arab... 84 3e-16
sp|Q9M9B3|COL8_ARATH Putative zinc finger protein CONSTANS-LIKE ... 72 9e-13
sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arab... 64 4e-10
sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arab... 63 7e-10
sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arab... 62 1e-09
sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arab... 62 1e-09
sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis... 61 2e-09
sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arab... 61 2e-09
sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Ar... 54 4e-07
sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Ar... 53 5e-07
sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR... 52 9e-07
sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR9... 52 2e-06
sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arab... 52 2e-06
sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR... 51 3e-06
sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR... 51 3e-06
sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Ar... 50 4e-06
sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR... 50 4e-06
sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Ar... 50 5e-06
sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR7... 50 6e-06
sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR7... 50 6e-06
sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR3... 50 6e-06
sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR3... 50 6e-06
sp|Q9LJ44|COL12_ARATH Putative zinc finger protein CONSTANS-LIKE... 49 1e-05
sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR... 49 1e-05
sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE... 48 2e-05
sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 ... 45 1e-04
sp|Q8GXL7|GAT27_ARATH GATA transcription factor 27 OS=Arabidopsi... 42 0.001
sp|Q8H1G0|GAT25_ARATH GATA transcription factor 25 OS=Arabidopsi... 41 0.002

>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16
OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2
Length = 417

Score = 87.8 bits (216), Expect = 2e-17
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = +3

Query: 69 GQVPSLVVVDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
G +PS D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 349 GCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403


>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6
OS=Arabidopsis thaliana GN=COL6 PE=2 SV=2
Length = 406

Score = 85.5 bits (210), Expect = 1e-16
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +3

Query: 96 DKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 354 DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399


>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7
OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1
Length = 392

Score = 84.0 bits (206), Expect = 3e-16
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +3

Query: 96 DKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
D REARVLRYKEKRRTRLFSK+IRYEVRKLNAE+RPR+KGRFVKR
Sbjct: 342 DGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387


>sp|Q9M9B3|COL8_ARATH Putative zinc finger protein CONSTANS-LIKE 8
OS=Arabidopsis thaliana GN=COL8 PE=2 SV=1
Length = 313

Score = 72.4 bits (176), Expect = 9e-13
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +3

Query: 105 REARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
REARV RY++KR+ RLF K+IRYEVRK+NA++RPRMKGRFV+R
Sbjct: 265 REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 307


>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3
OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1
Length = 294

Score = 63.5 bits (153), Expect = 4e-10
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = +3

Query: 72 QVPSLVVVDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
+ P++ + REARVLRY+EKR+ R F K IRY RK AE RPR+KGRF KR
Sbjct: 218 ETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 271


>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1
OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1
Length = 355

Score = 62.8 bits (151), Expect = 7e-10
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +3

Query: 78 PSLVVVDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
P+ ++ + REARVLRY+EK++ R F K IRY RK AE+RPR+KGRF K+
Sbjct: 277 PAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328


>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5
OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2
Length = 355

Score = 62.0 bits (149), Expect = 1e-09
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +3

Query: 105 REARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
REARVLRY+EKR+ R F K IRY RK AE RPR+KGRF KR
Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKR 327


>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2
OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1
Length = 347

Score = 62.0 bits (149), Expect = 1e-09
Identities = 30/43 (69%), Positives = 34/43 (79%)
Frame = +3

Query: 105 REARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
REARVLRY+EK++TR F K IRY RK AE RPR+KGRF KR
Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320


>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis
thaliana GN=CO PE=1 SV=1
Length = 373

Score = 61.2 bits (147), Expect = 2e-09
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +3

Query: 105 REARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
REARVLRY+EKR+TR F K IRY RK AE RPR+ GRF KR
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348


>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4
OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2
Length = 362

Score = 61.2 bits (147), Expect = 2e-09
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3

Query: 105 REARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
REARV+RY+EKR+ R F K IRY RK AE RPR+KGRF KR
Sbjct: 295 REARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 337


tr_hit_id A9SZT1
Definition tr|A9SZT1|A9SZT1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 58
Score (bit) 90.9
E-value 3.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920313|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_F02.
(457 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SZT1|A9SZT1_PHYPA Predicted protein OS=Physcomitrella paten... 91 3e-17
tr|A9SRL2|A9SRL2_PHYPA Predicted protein OS=Physcomitrella paten... 91 4e-17
tr|A9PFG3|A9PFG3_POPTR Putative uncharacterized protein OS=Popul... 89 1e-16
tr|Q5XF38|Q5XF38_ARATH At1g25440 (Putative uncharacterized prote... 88 2e-16
tr|A7PGS8|A7PGS8_VITVI Chromosome chr17 scaffold_16, whole genom... 88 2e-16
tr|A5AT61|A5AT61_VITVI Putative uncharacterized protein OS=Vitis... 88 2e-16
tr|Q5Z6R0|Q5Z6R0_ORYSJ Zinc finger protein-like OS=Oryza sativa ... 86 9e-16
tr|Q0DD26|Q0DD26_ORYSJ Os06g0264200 protein OS=Oryza sativa subs... 86 9e-16
tr|B7ZZ06|B7ZZ06_MAIZE Putative uncharacterized protein OS=Zea m... 86 9e-16
tr|B4FPT2|B4FPT2_MAIZE Putative uncharacterized protein OS=Zea m... 86 9e-16
tr|A2YBG7|A2YBG7_ORYSI Putative uncharacterized protein OS=Oryza... 86 9e-16
tr|B6TEI1|B6TEI1_MAIZE Zinc finger protein CONSTANS-LIKE 16 OS=Z... 86 1e-15
tr|A7P381|A7P381_VITVI Chromosome chr1 scaffold_5, whole genome ... 86 1e-15
tr|A9RDW4|A9RDW4_PHYPA Predicted protein OS=Physcomitrella paten... 85 2e-15
tr|Q6Z2L0|Q6Z2L0_ORYSJ Zinc finger protein-like (Putative unchar... 84 3e-15
tr|Q6Z2K9|Q6Z2K9_ORYSJ Os02g0731700 protein OS=Oryza sativa subs... 84 3e-15
tr|B8AI17|B8AI17_ORYSI Putative uncharacterized protein OS=Oryza... 84 3e-15
tr|A7NY90|A7NY90_VITVI Chromosome chr6 scaffold_3, whole genome ... 83 6e-15
tr|A9SRP0|A9SRP0_PHYPA Predicted protein OS=Physcomitrella paten... 83 8e-15
tr|B7FH76|B7FH76_MEDTR Putative uncharacterized protein OS=Medic... 82 1e-14
tr|A9RJE7|A9RJE7_PHYPA Predicted protein OS=Physcomitrella paten... 82 2e-14
tr|Q53RJ0|Q53RJ0_ORYSJ Os03g0711100 protein OS=Oryza sativa subs... 81 2e-14
tr|Q10E18|Q10E18_ORYSJ CCT motif family protein, expressed OS=Or... 81 2e-14
tr|A3ALZ7|A3ALZ7_ORYSJ Putative uncharacterized protein OS=Oryza... 81 2e-14
tr|A2XL97|A2XL97_ORYSI Putative uncharacterized protein OS=Oryza... 81 2e-14
tr|B6TFB2|B6TFB2_MAIZE CCT motif family protein OS=Zea mays PE=2... 80 4e-14
tr|A9SGK8|A9SGK8_PHYPA Predicted protein OS=Physcomitrella paten... 80 7e-14
tr|A7PLX5|A7PLX5_VITVI Chromosome chr14 scaffold_21, whole genom... 80 7e-14
tr|A7QXL6|A7QXL6_VITVI Chromosome undetermined scaffold_226, who... 79 9e-14
tr|A5BV03|A5BV03_VITVI Putative uncharacterized protein OS=Vitis... 79 9e-14

>tr|A9SZT1|A9SZT1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_167322 PE=4 SV=1
Length = 475

Score = 90.9 bits (224), Expect = 3e-17
Identities = 45/58 (77%), Positives = 50/58 (86%)
Frame = +3

Query: 60 SQAGQVPSLVVVDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
+Q Q +L DKGRE RV+RYKEKRRTRLFSK+IRYEVRKLNAERRPRMKGRFVK+
Sbjct: 413 TQYAQGATLAAGDKGREFRVMRYKEKRRTRLFSKKIRYEVRKLNAERRPRMKGRFVKQ 470


>tr|A9SRL2|A9SRL2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_233854 PE=4 SV=1
Length = 495

Score = 90.5 bits (223), Expect = 4e-17
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3

Query: 96 DKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
D+GREARVLRY+EKRRTRLFSK+IRYEVRKLNAERRPRMKGRFVKR
Sbjct: 445 DRGREARVLRYREKRRTRLFSKKIRYEVRKLNAERRPRMKGRFVKR 490


>tr|A9PFG3|A9PFG3_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 444

Score = 88.6 bits (218), Expect = 1e-16
Identities = 46/60 (76%), Positives = 51/60 (85%)
Frame = +3

Query: 54 MCSQAGQVPSLVVVDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
M S G P++V D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 381 MISGLGAHPAMV--DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 438


>tr|Q5XF38|Q5XF38_ARATH At1g25440 (Putative uncharacterized protein
At1g25440) OS=Arabidopsis thaliana GN=At1g25440 PE=2
SV=1
Length = 417

Score = 87.8 bits (216), Expect = 2e-16
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = +3

Query: 69 GQVPSLVVVDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
G +PS D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 349 GCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403


>tr|A7PGS8|A7PGS8_VITVI Chromosome chr17 scaffold_16, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017670001
PE=4 SV=1
Length = 410

Score = 87.8 bits (216), Expect = 2e-16
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +3

Query: 96 DKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
D GREARVLRY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 350 DGGREARVLRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 395


>tr|A5AT61|A5AT61_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_026326 PE=4 SV=1
Length = 475

Score = 87.8 bits (216), Expect = 2e-16
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +3

Query: 96 DKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
D GREARVLRY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 415 DGGREARVLRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 460


>tr|Q5Z6R0|Q5Z6R0_ORYSJ Zinc finger protein-like OS=Oryza sativa
subsp. japonica GN=OSJNBa0037N01.43 PE=4 SV=1
Length = 481

Score = 85.9 bits (211), Expect = 9e-16
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +3

Query: 93 VDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
+D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 420 MDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 466


>tr|Q0DD26|Q0DD26_ORYSJ Os06g0264200 protein OS=Oryza sativa subsp.
japonica GN=Os06g0264200 PE=4 SV=1
Length = 448

Score = 85.9 bits (211), Expect = 9e-16
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +3

Query: 93 VDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
+D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 387 MDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 433


>tr|B7ZZ06|B7ZZ06_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 157

Score = 85.9 bits (211), Expect = 9e-16
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +3

Query: 93 VDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
+D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 98 MDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 144


>tr|B4FPT2|B4FPT2_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 226

Score = 85.9 bits (211), Expect = 9e-16
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +3

Query: 93 VDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233
+D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR
Sbjct: 167 MDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 213