BP920313 |
Clone id |
YMU001_000135_F02 |
Library |
YMU01 |
Length |
457 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000135_F02. |
Accession |
BP920313 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3827Contig1 |
Sequence |
GGTTTACTGAATGTGGCATGGTAATGGTGGCGGAATCTAGCTGTAATAACAGTATGTGTA GTCAAGCTGGCCAGGTCCCCTCTTTAGTGGTGGTTGACAAGGGCCGGGAGGCTCGGGTGT TGCGGTATAAAGAGAAACGTCGCACCAGGTTGTTCTCGAAGAGGATTCGATATGAGGTCC GTAAGCTTAATGCAGAAAGGCGACCTCGAATGAAGGGTCGATTTGTGAAAAGGGCAGCGA TTGCTGCCTTAGCTGCCATGTAGATGTCTACAGCTCCGCATGCAAAACTTAGCAGAAAAC TTAAGCTTTTTGTCAACTGGTCTTATCTCCAAGAAGAAGACGAGAACAACAAGAGCAGGG AAACTCCCTGGCGCACATGTATGGTATGTAACATATTTATATATGCACAGGAAATTGAAT ACGGCGTAGTTGGAGGAGATGAGAGGAGTTAGGAATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8RWD0 |
Definition |
sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana |
Align length |
55 |
Score (bit) |
87.8 |
E-value |
2.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SZT1 |
Definition |
tr|A9SZT1|A9SZT1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
58 |
Score (bit) |
90.9 |
E-value |
3.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920313|Adiantum capillus-veneris mRNA, clone: YMU001_000135_F02. (457 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SZT1|A9SZT1_PHYPA Predicted protein OS=Physcomitrella paten... 91 3e-17 tr|A9SRL2|A9SRL2_PHYPA Predicted protein OS=Physcomitrella paten... 91 4e-17 tr|A9PFG3|A9PFG3_POPTR Putative uncharacterized protein OS=Popul... 89 1e-16 tr|Q5XF38|Q5XF38_ARATH At1g25440 (Putative uncharacterized prote... 88 2e-16 tr|A7PGS8|A7PGS8_VITVI Chromosome chr17 scaffold_16, whole genom... 88 2e-16 tr|A5AT61|A5AT61_VITVI Putative uncharacterized protein OS=Vitis... 88 2e-16 tr|Q5Z6R0|Q5Z6R0_ORYSJ Zinc finger protein-like OS=Oryza sativa ... 86 9e-16 tr|Q0DD26|Q0DD26_ORYSJ Os06g0264200 protein OS=Oryza sativa subs... 86 9e-16 tr|B7ZZ06|B7ZZ06_MAIZE Putative uncharacterized protein OS=Zea m... 86 9e-16 tr|B4FPT2|B4FPT2_MAIZE Putative uncharacterized protein OS=Zea m... 86 9e-16 tr|A2YBG7|A2YBG7_ORYSI Putative uncharacterized protein OS=Oryza... 86 9e-16 tr|B6TEI1|B6TEI1_MAIZE Zinc finger protein CONSTANS-LIKE 16 OS=Z... 86 1e-15 tr|A7P381|A7P381_VITVI Chromosome chr1 scaffold_5, whole genome ... 86 1e-15 tr|A9RDW4|A9RDW4_PHYPA Predicted protein OS=Physcomitrella paten... 85 2e-15 tr|Q6Z2L0|Q6Z2L0_ORYSJ Zinc finger protein-like (Putative unchar... 84 3e-15 tr|Q6Z2K9|Q6Z2K9_ORYSJ Os02g0731700 protein OS=Oryza sativa subs... 84 3e-15 tr|B8AI17|B8AI17_ORYSI Putative uncharacterized protein OS=Oryza... 84 3e-15 tr|A7NY90|A7NY90_VITVI Chromosome chr6 scaffold_3, whole genome ... 83 6e-15 tr|A9SRP0|A9SRP0_PHYPA Predicted protein OS=Physcomitrella paten... 83 8e-15 tr|B7FH76|B7FH76_MEDTR Putative uncharacterized protein OS=Medic... 82 1e-14 tr|A9RJE7|A9RJE7_PHYPA Predicted protein OS=Physcomitrella paten... 82 2e-14 tr|Q53RJ0|Q53RJ0_ORYSJ Os03g0711100 protein OS=Oryza sativa subs... 81 2e-14 tr|Q10E18|Q10E18_ORYSJ CCT motif family protein, expressed OS=Or... 81 2e-14 tr|A3ALZ7|A3ALZ7_ORYSJ Putative uncharacterized protein OS=Oryza... 81 2e-14 tr|A2XL97|A2XL97_ORYSI Putative uncharacterized protein OS=Oryza... 81 2e-14 tr|B6TFB2|B6TFB2_MAIZE CCT motif family protein OS=Zea mays PE=2... 80 4e-14 tr|A9SGK8|A9SGK8_PHYPA Predicted protein OS=Physcomitrella paten... 80 7e-14 tr|A7PLX5|A7PLX5_VITVI Chromosome chr14 scaffold_21, whole genom... 80 7e-14 tr|A7QXL6|A7QXL6_VITVI Chromosome undetermined scaffold_226, who... 79 9e-14 tr|A5BV03|A5BV03_VITVI Putative uncharacterized protein OS=Vitis... 79 9e-14
>tr|A9SZT1|A9SZT1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_167322 PE=4 SV=1 Length = 475
Score = 90.9 bits (224), Expect = 3e-17 Identities = 45/58 (77%), Positives = 50/58 (86%) Frame = +3
Query: 60 SQAGQVPSLVVVDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 +Q Q +L DKGRE RV+RYKEKRRTRLFSK+IRYEVRKLNAERRPRMKGRFVK+ Sbjct: 413 TQYAQGATLAAGDKGREFRVMRYKEKRRTRLFSKKIRYEVRKLNAERRPRMKGRFVKQ 470
>tr|A9SRL2|A9SRL2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233854 PE=4 SV=1 Length = 495
Score = 90.5 bits (223), Expect = 4e-17 Identities = 43/46 (93%), Positives = 46/46 (100%) Frame = +3
Query: 96 DKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 D+GREARVLRY+EKRRTRLFSK+IRYEVRKLNAERRPRMKGRFVKR Sbjct: 445 DRGREARVLRYREKRRTRLFSKKIRYEVRKLNAERRPRMKGRFVKR 490
>tr|A9PFG3|A9PFG3_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 444
Score = 88.6 bits (218), Expect = 1e-16 Identities = 46/60 (76%), Positives = 51/60 (85%) Frame = +3
Query: 54 MCSQAGQVPSLVVVDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 M S G P++V D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR Sbjct: 381 MISGLGAHPAMV--DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 438
>tr|Q5XF38|Q5XF38_ARATH At1g25440 (Putative uncharacterized protein At1g25440) OS=Arabidopsis thaliana GN=At1g25440 PE=2 SV=1 Length = 417
Score = 87.8 bits (216), Expect = 2e-16 Identities = 44/55 (80%), Positives = 48/55 (87%) Frame = +3
Query: 69 GQVPSLVVVDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 G +PS D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR Sbjct: 349 GCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403
>tr|A7PGS8|A7PGS8_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017670001 PE=4 SV=1 Length = 410
Score = 87.8 bits (216), Expect = 2e-16 Identities = 42/46 (91%), Positives = 45/46 (97%) Frame = +3
Query: 96 DKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 D GREARVLRY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR Sbjct: 350 DGGREARVLRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 395
>tr|A5AT61|A5AT61_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026326 PE=4 SV=1 Length = 475
Score = 87.8 bits (216), Expect = 2e-16 Identities = 42/46 (91%), Positives = 45/46 (97%) Frame = +3
Query: 96 DKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 D GREARVLRY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR Sbjct: 415 DGGREARVLRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 460
>tr|Q5Z6R0|Q5Z6R0_ORYSJ Zinc finger protein-like OS=Oryza sativa subsp. japonica GN=OSJNBa0037N01.43 PE=4 SV=1 Length = 481
Score = 85.9 bits (211), Expect = 9e-16 Identities = 41/47 (87%), Positives = 45/47 (95%) Frame = +3
Query: 93 VDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 +D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR Sbjct: 420 MDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 466
>tr|Q0DD26|Q0DD26_ORYSJ Os06g0264200 protein OS=Oryza sativa subsp. japonica GN=Os06g0264200 PE=4 SV=1 Length = 448
Score = 85.9 bits (211), Expect = 9e-16 Identities = 41/47 (87%), Positives = 45/47 (95%) Frame = +3
Query: 93 VDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 +D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR Sbjct: 387 MDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 433
>tr|B7ZZ06|B7ZZ06_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 157
Score = 85.9 bits (211), Expect = 9e-16 Identities = 41/47 (87%), Positives = 45/47 (95%) Frame = +3
Query: 93 VDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 +D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR Sbjct: 98 MDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 144
>tr|B4FPT2|B4FPT2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 226
Score = 85.9 bits (211), Expect = 9e-16 Identities = 41/47 (87%), Positives = 45/47 (95%) Frame = +3
Query: 93 VDKGREARVLRYKEKRRTRLFSKRIRYEVRKLNAERRPRMKGRFVKR 233 +D GREARV RY+EKRRTRLFSK+IRYEVRKLNAE+RPRMKGRFVKR Sbjct: 167 MDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 213
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