BP920315
Clone id YMU001_000135_F04
Library
Length 565
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000135_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTTTCTATCAATTGAATACAACATTCAAATGGAGTGAAACCCATCC
AATCAATGGTGCGACACAACAACAATCTCAACCCTGAGAAGGGAGTTCGAGCCAGTGCAC
CACAACCAGCACAAACACATGAGAGGAAATGTAAAACACCATGCGTCCAACCATAACAGA
ATCATATGAGCTTACCACTGAAGGTACTGGATGCCATCCATGGCACAGCCATGAGCACTG
GTATAACTGAGGAGGCCATGCTCTTGGCATACAATCAACCTCACCATGATGAGGCAACCC
CCTCATGCAGAGTTCAATTCTCATCATTTTCCTGAATCTGCCTCTCAATATCAAGCCTCT
GCCCCTCAATATCAAACACAAGAGAAGAGTGGTTGTAACTTTTGCTGATGGGGTGATTAC
GCAGCATCCACCAGACAACCTCTCAATTCATGTACCCACAAGACACTCGTCCCCCTTGAA
TCACTGCAACTTCATCCATGATCCAACAGCTGTGCATTCAACACAACCCATTCACAAGGT
CTACTGCCACTCATTATCTCCAATA
■■Homology search results ■■ -
sp_hit_id Q0INM3
Definition sp|Q0INM3|BGL15_ORYSJ Beta-galactosidase 15 OS=Oryza sativa subsp. japonica
Align length 35
Score (bit) 32.0
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920315|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_F04.
(547 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0INM3|BGL15_ORYSJ Beta-galactosidase 15 OS=Oryza sativa subs... 32 2.0
sp|Q54I36|KYK3_DICDI Dual specificity protein kinase dpyk3 OS=Di... 27 3.1
sp|Q8ZPI0|YNEE_SALTY UPF0187 protein yneE OS=Salmonella typhimur... 30 5.9
sp|Q8Z706|YNEE_SALTI UPF0187 protein yneE OS=Salmonella typhi GN... 30 5.9
sp|Q9VP48|RAB26_DROME Ras-related protein Rab-26 OS=Drosophila m... 30 7.7

>sp|Q0INM3|BGL15_ORYSJ Beta-galactosidase 15 OS=Oryza sativa subsp.
japonica GN=Os12g0429200 PE=2 SV=1
Length = 919

Score = 32.0 bits (71), Expect = 2.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3

Query: 75 PEKGVRASAPQPAQTHERKCKTPCVQP*QNHMSLP 179
PE G +S P +ERKC++ C P QN +P
Sbjct: 728 PESGCSSSCYYPGAYNERKCQSNCGMPTQNWYHIP 762


>sp|Q54I36|KYK3_DICDI Dual specificity protein kinase dpyk3
OS=Dictyostelium discoideum GN=pkyA PE=1 SV=1
Length = 1338

Score = 27.3 bits (59), Expect(2) = 3.1
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1

Query: 34 NPSNQWCDTTTISTLRREFEPVHHNQHKHMRGNVKHHASNHN 159
NP N +T+ I+++ ++H+ H H + HH ++N
Sbjct: 426 NPIN-CINTSVINSITANTNCINHHHHHHQHNHHNHHQGHNN 466



Score = 21.6 bits (44), Expect(2) = 3.1
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +2

Query: 149 PTITESYELTTEGTGCHPWHSHEHWYN 229
PT++ T+ HP H+H+ N
Sbjct: 485 PTLSSGSSSTSSSNPHHPNHNHQKGLN 511


>sp|Q8ZPI0|YNEE_SALTY UPF0187 protein yneE OS=Salmonella typhimurium
GN=yneE PE=3 SV=2
Length = 304

Score = 30.4 bits (67), Expect = 5.9
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -1

Query: 220 VLMAVPWMASSTFSGKLI*FCYGWTHGVLHFLSCVCAGCGALARTPFS-GLRLLLCRTI 47
+L+ W+A SGKL + + L+ +S V AGC +A TP L+L RT+
Sbjct: 160 LLLMGEWLAIRRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTV 218


>sp|Q8Z706|YNEE_SALTI UPF0187 protein yneE OS=Salmonella typhi
GN=yneE PE=3 SV=2
Length = 304

Score = 30.4 bits (67), Expect = 5.9
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -1

Query: 220 VLMAVPWMASSTFSGKLI*FCYGWTHGVLHFLSCVCAGCGALARTPFS-GLRLLLCRTI 47
+L+ W+A SGKL + + L+ +S V AGC +A TP L+L RT+
Sbjct: 160 LLLMGEWLAIRRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTV 218


>sp|Q9VP48|RAB26_DROME Ras-related protein Rab-26 OS=Drosophila
melanogaster GN=Rab26 PE=1 SV=2
Length = 388

Score = 30.0 bits (66), Expect = 7.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1

Query: 58 TTTISTLRREFEPVHHNQHKHMRGNVKHHASNHNRI 165
TTT ++ P HH+Q H + + HH +H+++
Sbjct: 76 TTTTQQQQQHHNPSHHHQSSHHQPSHHHHHHHHSQL 111


tr_hit_id B1MDS4
Definition tr|B1MDS4|B1MDS4_MYCA9 Probable peptide synthetase NRP OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)
Align length 38
Score (bit) 34.3
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920315|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_F04.
(547 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1MDS4|B1MDS4_MYCA9 Probable peptide synthetase NRP OS=Mycoba... 34 4.4
tr|B0XD66|B0XD66_CULQU Tankyrase OS=Culex quinquefasciatus GN=Cp... 33 7.5
tr|A4I4F7|A4I4F7_LEIIN Putative uncharacterized protein (Fragmen... 33 7.6

>tr|B1MDS4|B1MDS4_MYCA9 Probable peptide synthetase NRP
OS=Mycobacterium abscessus (strain ATCC 19977 / DSM
44196) GN=MAB_3317c PE=4 SV=1
Length = 2557

Score = 34.3 bits (77), Expect = 4.4
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +1

Query: 58 TTTISTLRREFEPVHHN--QHKHMRGNVKHHASNHNRI 165
TTT++ L R+ + +H++ +H+H+ N HH + H+R+
Sbjct: 1383 TTTVADLLRDMQSIHNDLLEHEHLALNEIHHLAGHDRL 1420


>tr|B0XD66|B0XD66_CULQU Tankyrase OS=Culex quinquefasciatus
GN=CpipJ_CPIJ017099 PE=4 SV=1
Length = 1164

Score = 33.5 bits (75), Expect = 7.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1

Query: 85 EFEPVHHNQHKHMRGNVKHHASNHNR 162
+F HH+ H H+ HHA NHNR
Sbjct: 306 QFNHHHHHHHHHLAMAAHHHAQNHNR 331


>tr|A4I4F7|A4I4F7_LEIIN Putative uncharacterized protein (Fragment)
OS=Leishmania infantum GN=LinJ29.1210 PE=4 SV=1
Length = 597

Score = 33.5 bits (75), Expect = 7.6
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3

Query: 66 NLNPEKGVRASAPQPAQTHERKCKTPCVQP*QNHMSLPLKVLDAIHGTAMSTGITE 233
+L P A P QTH+ + +P P QNH++L DA+ G A + E
Sbjct: 494 SLAPSAESLAILPDQPQTHQSEATSPSALPAQNHLTLRAMDTDALPGVAAEGRLPE 549