BP920316 |
Clone id |
YMU001_000135_F05 |
Library |
YMU01 |
Length |
483 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000135_F05. |
Accession |
BP920316 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL474Contig1 |
Sequence |
AGCAAGAAGCGAGCTTTCAAGTGCGAAGCAGGGTTTAATGGAGACAGTTTATGGAAGGGA AGTATGGAATAGCTTAGAGCAAGTAGACAAGCAGAGGAGCGTAATAAGCAGTAGAGTAAT ATTTGGCTCCATGAGATCTGCTAAGGGTATTGCAAGCTCAATGGTAGTTGAGATTGTGAG AGTTGCTCTGCAAAGAAAAAACAAGCTTTCCTTCCCGGACCGTGCGCTACTCAGTTATCT TGTACAGAAGAGCCCACACTTGTTAGGAAGGAGGGTAACAGAGAATTTGCAAGTGATGGA AAGTAGGGATTCTAATATCTGTAGGGTCGAGACCGTAAAGCTTGAGGATGTGCTTGTGGG AAGTCATGATGAACGGATATATTCTGTTCTGCATGCAAGCACTTTGAATACCATGCGAAC ATTGGGTCCGATTCAAAATCAACATGACATAACATCACAAAGTAATGTAACTTGGAGTGG GCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7NNG8 |
Definition |
sp|Q7NNG8|GLMU_GLOVI Bifunctional protein glmU OS=Gloeobacter violaceus |
Align length |
122 |
Score (bit) |
33.9 |
E-value |
0.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SME5 |
Definition |
tr|A9SME5|A9SME5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
99 |
Score (bit) |
88.2 |
E-value |
2.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920316|Adiantum capillus-veneris mRNA, clone: YMU001_000135_F05. (483 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SME5|A9SME5_PHYPA Predicted protein OS=Physcomitrella paten... 88 2e-16 tr|A9RR70|A9RR70_PHYPA Predicted protein OS=Physcomitrella paten... 81 2e-14 tr|A9T884|A9T884_PHYPA Predicted protein OS=Physcomitrella paten... 69 9e-11 tr|A9T8M9|A9T8M9_PHYPA Predicted protein (Fragment) OS=Physcomit... 48 2e-04 tr|A7PWH0|A7PWH0_VITVI Chromosome chr8 scaffold_34, whole genome... 46 8e-04 tr|A9QZ33|A9QZ33_YERPG Putative uncharacterized protein OS=Yersi... 37 0.63 tr|Q7CI90|Q7CI90_YERPE Putative uncharacterized protein OS=Yersi... 36 1.1 tr|Q66AZ3|Q66AZ3_YERPS Putative uncharacterized protein OS=Yersi... 36 1.1 tr|Q1CJM5|Q1CJM5_YERPN Putative uncharacterized protein OS=Yersi... 36 1.1 tr|Q1C878|Q1C878_YERPA Putative uncharacterized protein OS=Yersi... 36 1.1 tr|B2K2X1|B2K2X1_YERPB Putative uncharacterized protein OS=Yersi... 36 1.1 tr|B1JMA4|B1JMA4_YERPY Putative uncharacterized protein OS=Yersi... 36 1.1 tr|A7FII6|A7FII6_YERP3 Putative uncharacterized protein OS=Yersi... 36 1.1 tr|A4TJR4|A4TJR4_YERPP Putative uncharacterized protein OS=Yersi... 36 1.1 tr|B0HSD3|B0HSD3_YERPE Putative uncharacterized protein OS=Yersi... 36 1.1 tr|B0HCR2|B0HCR2_YERPE Putative uncharacterized protein OS=Yersi... 36 1.1 tr|B0H512|B0H512_YERPE Putative uncharacterized protein OS=Yersi... 36 1.1 tr|B0GRY7|B0GRY7_YERPE Putative uncharacterized protein OS=Yersi... 36 1.1 tr|B0GJM1|B0GJM1_YERPE Putative uncharacterized protein OS=Yersi... 36 1.1 tr|A9ZZZ8|A9ZZZ8_YERPE Putative uncharacterized protein OS=Yersi... 36 1.1 tr|A9ZBE9|A9ZBE9_YERPE Putative uncharacterized protein OS=Yersi... 36 1.1 tr|A6BR19|A6BR19_YERPE Putative uncharacterized protein OS=Yersi... 36 1.1 tr|Q4N1P8|Q4N1P8_THEPA Membrane-associated calcium-binding prote... 35 2.4 tr|Q176S2|Q176S2_AEDAE Putative uncharacterized protein OS=Aedes... 34 4.1 tr|Q9M2K7|Q9M2K7_ARATH Putative uncharacterized protein F28O9.25... 33 5.4 tr|Q8W4L8|Q8W4L8_ARATH Putative uncharacterized protein At3g5740... 33 5.4 tr|Q9FYR8|Q9FYR8_ARATH Emb|CAB68146.1 (Putative uncharacterized ... 33 7.0 tr|A5AMK7|A5AMK7_VITVI Putative uncharacterized protein OS=Vitis... 33 7.0 tr|B2G4E6|B2G4E6_ZYGRO Uncharacterised protein KLLA0E11957g OS=Z... 33 7.0 tr|A5FB53|A5FB53_FLAJ1 Sensor protein OS=Flavobacterium johnsoni... 33 9.2
>tr|A9SME5|A9SME5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165707 PE=4 SV=1 Length = 598
Score = 88.2 bits (217), Expect = 2e-16 Identities = 46/99 (46%), Positives = 70/99 (70%) Frame = +2
Query: 8 SELSSAKQGLMETVYGREVWNSLEQVDKQRSVISSRVIFGSMRSAKGIASSMVVEIVRVA 187 S ++A G++E+VYG++ WNSLE+ D+ R VIS+ +I G +R + +A +M EIVRVA Sbjct: 418 SSEANATTGVIESVYGKKFWNSLEEEDRARKVISTGLIVGGIRPVRSVAMAMATEIVRVA 477
Query: 188 LQRKNKLSFPDRALLSYLVQKSPHLLGRRVTENLQVMES 304 L RK + +F A+LS+LV KS +LG++V +LQV +S Sbjct: 478 LLRKTRDAFNPEAVLSFLVHKS-SVLGKKVASHLQVHDS 515
>tr|A9RR70|A9RR70_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_160579 PE=4 SV=1 Length = 681
Score = 81.3 bits (199), Expect = 2e-14 Identities = 37/97 (38%), Positives = 70/97 (72%) Frame = +2
Query: 29 QGLMETVYGREVWNSLEQVDKQRSVISSRVIFGSMRSAKGIASSMVVEIVRVALQRKNKL 208 +GL+ ++YG +W SL++ ++R VISS + G + + +A+ M EIVR+AL++KN+ Sbjct: 488 KGLIPSLYGSVLWRSLDKAHRERVVISSGFVMGKIEYVRKLANKMTTEIVRIALEKKNRR 547
Query: 209 SFPDRALLSYLVQKSPHLLGRRVTENLQVMESRDSNI 319 F D+A+++YLV +S +LG+RV ++L+++ +R+S + Sbjct: 548 PFHDKAVINYLVHQS-SVLGKRVLDHLKIVPNRNSAV 583
>tr|A9T884|A9T884_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_168589 PE=4 SV=1 Length = 584
Score = 69.3 bits (168), Expect = 9e-11 Identities = 32/94 (34%), Positives = 65/94 (69%) Frame = +2
Query: 32 GLMETVYGREVWNSLEQVDKQRSVISSRVIFGSMRSAKGIASSMVVEIVRVALQRKNKLS 211 GL+++VYG +W++L++ +KQ +V+S+ VI G + +G+A M EIVR+A++ K++ Sbjct: 438 GLIQSVYGTLMWSNLDESNKQFAVVSAAVIMGEVHYVRGLAMKMTSEIVRMAIEHKSRRL 497
Query: 212 FPDRALLSYLVQKSPHLLGRRVTENLQVMESRDS 313 F D+A+L+ V ++ ++ E+++V+ ++DS Sbjct: 498 FHDKAVLNMWVHNKATIV-KKFAEHMKVVRNKDS 530
>tr|A9T8M9|A9T8M9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_4931 PE=4 SV=1 Length = 268
Score = 48.1 bits (113), Expect = 2e-04 Identities = 25/52 (48%), Positives = 33/52 (63%) Frame = +2
Query: 89 KQRSVISSRVIFGSMRSAKGIASSMVVEIVRVALQRKNKLSFPDRALLSYLV 244 K S I + VI G MR + + ++M EIVRVAL RKN++ F +LSYLV Sbjct: 217 KSWSFIDTGVILGGMRPVRSLTTAMATEIVRVALLRKNRMPFNVEIVLSYLV 268
>tr|A7PWH0|A7PWH0_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025609001 PE=4 SV=1 Length = 511
Score = 46.2 bits (108), Expect = 8e-04 Identities = 25/80 (31%), Positives = 45/80 (56%) Frame = +2
Query: 77 EQVDKQRSVISSRVIFGSMRSAKGIASSMVVEIVRVALQRKNKLSFPDRALLSYLVQKSP 256 ++ + +++S +I G R + ++++M++EIVR A+QRK K F + LL+ LV S Sbjct: 383 DKTQNHQKLVNSEIIMGGTRGVRRLSNAMLIEIVRAAMQRKGKSPFSESVLLNQLV--SN 440
Query: 257 HLLGRRVTENLQVMESRDSN 316 +L + V + DSN Sbjct: 441 GVLSKGVDLTISNESVPDSN 460
>tr|A9QZ33|A9QZ33_YERPG Putative uncharacterized protein OS=Yersinia pestis bv. Antiqua (strain Angola) GN=YpAngola_A2486 PE=4 SV=1 Length = 310
Score = 36.6 bits (83), Expect = 0.63 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 3/105 (2%) Frame = +2
Query: 11 ELSSAKQGLMETVYGREVWNSLEQVDKQRSVISSRVIFGSMRSAKG---IASSMVVEIVR 181 ++ S +G + +G+ +NS+E++ QRS+ S+ G+MRS K IA + + VR Sbjct: 206 DIESTDEG-SDLCWGKPHFNSIEKIASQRSIFSALSTHGNMRSKKAIEKIAHNHKADEVR 264
Query: 182 VALQRKNKLSFPDRALLSYLVQKSPHLLGRRVTENLQVMESRDSN 316 AL L D L L + H + RRV + + + SN Sbjct: 265 -ALSWVAMLRANDTVLSDVLTLEKSHYV-RRVLAEINMAQGETSN 307
>tr|Q7CI90|Q7CI90_YERPE Putative uncharacterized protein OS=Yersinia pestis GN=YPO1995 PE=4 SV=1 Length = 310
Score = 35.8 bits (81), Expect = 1.1 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +2
Query: 50 YGREVWNSLEQVDKQRSVISSRVIFGSMRSAKG---IASSMVVEIVRVALQRKNKLSFPD 220 +G+ +NS+E++ QRS+ S+ G+MRS K IA + + VR AL L D Sbjct: 218 WGKPHFNSIEKIASQRSIFSALSTHGNMRSKKAIEKIAHNHKADEVR-ALSWVAMLRAND 276
Query: 221 RALLSYLVQKSPHLLGRRVTENLQVMESRDSN 316 L L + H + RRV + + + SN Sbjct: 277 TVLSDVLTLEKSHYV-RRVLAEINMAQGETSN 307
>tr|Q66AZ3|Q66AZ3_YERPS Putative uncharacterized protein OS=Yersinia pseudotuberculosis GN=YPTB1987 PE=4 SV=1 Length = 310
Score = 35.8 bits (81), Expect = 1.1 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +2
Query: 50 YGREVWNSLEQVDKQRSVISSRVIFGSMRSAKG---IASSMVVEIVRVALQRKNKLSFPD 220 +G+ +NS+E++ QRS+ S+ G+MRS K IA + + VR AL L D Sbjct: 218 WGKPHFNSIEKIASQRSIFSALSTHGNMRSKKAIEKIAHNHKADEVR-ALSWVAMLRAND 276
Query: 221 RALLSYLVQKSPHLLGRRVTENLQVMESRDSN 316 L L + H + RRV + + + SN Sbjct: 277 TVLSDVLTLEKSHYV-RRVLAEINMAQGETSN 307
>tr|Q1CJM5|Q1CJM5_YERPN Putative uncharacterized protein OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=YPN_1475 PE=4 SV=1 Length = 310
Score = 35.8 bits (81), Expect = 1.1 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +2
Query: 50 YGREVWNSLEQVDKQRSVISSRVIFGSMRSAKG---IASSMVVEIVRVALQRKNKLSFPD 220 +G+ +NS+E++ QRS+ S+ G+MRS K IA + + VR AL L D Sbjct: 218 WGKPHFNSIEKIASQRSIFSALSTHGNMRSKKAIEKIAHNHKADEVR-ALSWVAMLRAND 276
Query: 221 RALLSYLVQKSPHLLGRRVTENLQVMESRDSN 316 L L + H + RRV + + + SN Sbjct: 277 TVLSDVLTLEKSHYV-RRVLAEINMAQGETSN 307
>tr|Q1C878|Q1C878_YERPA Putative uncharacterized protein OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=YPA_1377 PE=4 SV=1 Length = 310
Score = 35.8 bits (81), Expect = 1.1 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +2
Query: 50 YGREVWNSLEQVDKQRSVISSRVIFGSMRSAKG---IASSMVVEIVRVALQRKNKLSFPD 220 +G+ +NS+E++ QRS+ S+ G+MRS K IA + + VR AL L D Sbjct: 218 WGKPHFNSIEKIASQRSIFSALSTHGNMRSKKAIEKIAHNHKADEVR-ALSWVAMLRAND 276
Query: 221 RALLSYLVQKSPHLLGRRVTENLQVMESRDSN 316 L L + H + RRV + + + SN Sbjct: 277 TVLSDVLTLEKSHYV-RRVLAEINMAQGETSN 307
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