BP920325
Clone id YMU001_000135_G02
Library
Length 518
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000135_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGTGGAAGCAGGTTGATTGAGATATCAAGTGGCTAGTGGTTGAGAATGCTTGTGTACAAG
GAAGAATAGCATGTGATAAGGATGTGGTTGAGCATGCAGTTATAAAAGAAGCTAATCCTT
TAGCACCAAAAAAGTAAGAGAAAAGAGATATGTCTCTATATCCTTGTATGAGGTCACGTC
AACTAGTGAAACCCAAGAGCCAATTGCAACAGGCATGTCAGAGAAGAGAATACAAGATCA
AGAAGTGAATGCAATACTTAAGGAAGCTATTCATTCTCTTACTGAAAAGTAGGCTGAACA
TAGTAAGTTAGAAGGGCCCTCACTTGAGCTTGATGATTGAGGAAACTCAAATGTAAGACG
TCTTTGTTGAAGACACGCAAGGGCGGAATCTCGATCTCCTTAGCCATCTTGTGGGCTTAA
AGTACTAGTCCAATCCAAAAGAAGAAGTGACTTATCCTTCTGTCTATGAAGTTCATAAAT
GTATGGGTTATTAGCTCCCTGTAAAAGTTGGGTGTGTG
■■Homology search results ■■ -
sp_hit_id Q9ZM34
Definition sp|Q9ZM34|FLHF_HELPJ Flagellar biosynthesis protein flhF OS=Helicobacter pylori J99
Align length 68
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920325|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_G02.
(518 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ZM34|FLHF_HELPJ Flagellar biosynthesis protein flhF OS=Heli... 32 1.4
sp|Q7TPS5|K0528_MOUSE Uncharacterized protein KIAA0528 OS=Mus mu... 32 2.3
sp|Q865B6|PRGC1_PIG Peroxisome proliferator-activated receptor g... 30 6.8
sp|Q5RDC8|K0528_PONAB Uncharacterized protein KIAA0528 homolog O... 30 6.8
sp|Q86YS7|K0528_HUMAN Uncharacterized protein KIAA0528 OS=Homo s... 30 6.8
sp|Q96JE9|MAP6_HUMAN Microtubule-associated protein 6 OS=Homo sa... 30 8.8
sp|P21178|CEA1_SHISO Colicin-E1* OS=Shigella sonnei GN=cea PE=3 ... 30 8.8

>sp|Q9ZM34|FLHF_HELPJ Flagellar biosynthesis protein flhF
OS=Helicobacter pylori J99 GN=flhF PE=3 SV=1
Length = 455

Score = 32.3 bits (72), Expect = 1.4
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2

Query: 119 FSTKKVREKRYVSISLYEVTSTSETQEPIATGMSEKRIQDQEVNAILKEAIHSLTEK*AE 298
F T+++R+K S LYE+ E +E + + + D+E+N ++ + L+ E
Sbjct: 29 FKTQEIRKKTLTSSGLYEIVVAVEEEENKKAPLIPESLYDEELNE--EDVVMQLSSTVEE 86

Query: 299 HSKLEGPS 322
KL G S
Sbjct: 87 MRKLAGVS 94


>sp|Q7TPS5|K0528_MOUSE Uncharacterized protein KIAA0528 OS=Mus
musculus GN=Kiaa0528 PE=1 SV=2
Length = 1016

Score = 31.6 bits (70), Expect = 2.3
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +2

Query: 98 SYKRS*SFSTKKVREKRYVSISLYEVTSTSETQEPIATGMSEKRIQDQEVNAILKEAIHS 277
SY++ S K++ + + LYE+T ++E I + + E R Q + E+
Sbjct: 606 SYEQHISHMQKRINDTIAKNKELYEITPPEVSEEMIGSPIPEPR-QRSRLLRSQSESSDE 664

Query: 278 LTEK*AEHSKLEGPSLELDD 337
+TE H K + LE+DD
Sbjct: 665 VTELDLSHGKKDAFVLEIDD 684


>sp|Q865B6|PRGC1_PIG Peroxisome proliferator-activated receptor
gamma coactivator 1-alpha OS=Sus scrofa GN=PPARGC1A PE=2
SV=1
Length = 796

Score = 30.0 bits (66), Expect = 6.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2

Query: 173 VTSTSETQEPIATGMSEKRIQDQEVNAILKE 265
+T TSE ++ G + K++QDQE+ A L +
Sbjct: 432 LTETSEASRQVSPGSARKQLQDQEIRAELNK 462


>sp|Q5RDC8|K0528_PONAB Uncharacterized protein KIAA0528 homolog
OS=Pongo abelii PE=2 SV=1
Length = 1000

Score = 30.0 bits (66), Expect = 6.8
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2

Query: 98 SYKRS*SFSTKKVREKRYVSISLYEVTSTSETQEPIATGMSEKRIQDQEVNAILKEAIHS 277
SY++ S KK+ + + LYE+ ++E I + + E R Q + E+
Sbjct: 606 SYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPR-QRSRLLRSQSESSDE 664

Query: 278 LTEK*AEHSKLEGPSLELDD 337
+TE H K + LE+DD
Sbjct: 665 VTELDLSHGKKDAFVLEIDD 684


>sp|Q86YS7|K0528_HUMAN Uncharacterized protein KIAA0528 OS=Homo
sapiens GN=KIAA0528 PE=1 SV=1
Length = 1000

Score = 30.0 bits (66), Expect = 6.8
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2

Query: 98 SYKRS*SFSTKKVREKRYVSISLYEVTSTSETQEPIATGMSEKRIQDQEVNAILKEAIHS 277
SY++ S KK+ + + LYE+ ++E I + + E R Q + E+
Sbjct: 606 SYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPR-QRSRLLRSQSESSDE 664

Query: 278 LTEK*AEHSKLEGPSLELDD 337
+TE H K + LE+DD
Sbjct: 665 VTELDLSHGKKDAFVLEIDD 684


>sp|Q96JE9|MAP6_HUMAN Microtubule-associated protein 6 OS=Homo
sapiens GN=MAP6 PE=1 SV=2
Length = 813

Score = 29.6 bits (65), Expect = 8.8
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +2

Query: 125 TKKVREKRYVSISLYEVTSTSETQEPIATGMSEKRIQDQEVNAILKEAIHSLTEK*AEHS 304
T+K ++K+ VS + + P T +K Q +E+N L EA SL + ++ S
Sbjct: 394 TRKAKDKQAVS---GQAAKKKSAEGPSTTKPDDKE-QSKEMNNKLAEAKESLAQPVSDSS 449

Query: 305 KLEGP 319
K +GP
Sbjct: 450 KTQGP 454


>sp|P21178|CEA1_SHISO Colicin-E1* OS=Shigella sonnei GN=cea PE=3
SV=2
Length = 521

Score = 29.6 bits (65), Expect = 8.8
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2

Query: 140 EKRYVSISLYEVTSTSETQEPIATGMSEKRIQDQEVNAILKEAIHSLTEK*AEHSKLEGP 319
EKR ++S E + Q+ +A SE D+E+N + S+ + AE + L G
Sbjct: 177 EKRLAALS-EEARAVEVAQKNLAAAQSELAKVDEEINTLNTRLSSSIHARDAETNTLSGK 235

Query: 320 SLELD 334
ELD
Sbjct: 236 RNELD 240


tr_hit_id A2DSJ7
Definition tr|A2DSJ7|A2DSJ7_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3
Align length 50
Score (bit) 34.3
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920325|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_G02.
(518 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2DSJ7|A2DSJ7_TRIVA Putative uncharacterized protein OS=Trich... 34 3.8

>tr|A2DSJ7|A2DSJ7_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_434140 PE=4 SV=1
Length = 2682

Score = 34.3 bits (77), Expect = 3.8
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +2

Query: 197 EPIATGMSEKRIQDQEVNAILKEAIHSLTEK*AEHSKLEGPSLELDD*GN 346
+PI E++ Q QE IL E I + + AE K EGPS E +D N
Sbjct: 1875 KPITEQKEEEKSQKQEEEEILDEEIKAQIQSFAEKEKEEGPSAENNDEAN 1924