BP920333 [AcEST]

BP920333
Clone id	YMU001_000135_H02
Library	YMU01
Length	529
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000135_H02.
Accession	BP920333
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	TTTTTTTTTTTTTTTTTGGAGCCACGGTTAAGGAGATATGATCAAAATACTGGACCCCAG TCTGCCCACATCATGCAGGGGTAGCTCATTTCCAACTTTTCCAATTCCTGTTCACACTGG CTCCTCTCTTCTTGTGTAAACCCTTGGGGGTTCCCTTCACCTATAAAAGGGGACCTCTTC TTCCTTGGAAGAAACTCAAGTATTCAAGCCATTGATGAGAGGAATTCTCGAGGGAGTGAG TAGTAATGCCTAATTGTACTTAGCCATTAACATAAGCCCAAGCCTACACTTTCTCCTAGA GGGAGACTAGCCATTCTTGCAACAAGCTAACCTTGGAAGATCAACTCTAATCAAAGAAGG TCTTGCACTTGGTGTATCAACCAAAGTGGAATTATCCACTCTTCTTCTCTCTCCCATCAA TAATGGTGCCGAAGGGTTTCAAGTAAGATGTGTTCTACATTGATGTTTTCTTGATTTCCT GTTGTTTCCATTTTCATCTCTAATCCAACATATATATGTATCTAATCTC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920333\|Adiantum capillus-veneris mRNA, clone: YMU001_000135_H02. (512 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A0D5X6
Definition	tr\|A0D5X6\|A0D5X6_PARTE Chromosome undetermined scaffold_39, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length	90
Score (bit)	33.1
E-value	8.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920333\|Adiantum capillus-veneris mRNA, clone: YMU001_000135_H02. (512 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A0D5X6\|A0D5X6_PARTE Chromosome undetermined scaffold_39, whol... 33 8.1 >tr\|A0D5X6\|A0D5X6_PARTE Chromosome undetermined scaffold_39, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00013873001 PE=4 SV=1 Length = 1206 Score = 33.1 bits (74), Expect = 8.1 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Frame = +3 Query: 162 SSLEETQVFKPLMRGILEGVSSNA--LYLAINI--SPSLHFLLEGDPFLQQANLGRST 329 S L T+ + PL++ +L+ V S A L+L N SL +L+EG L++ NLG + Sbjct: 243 SDLGLTEKYFPLIKNLLQSVKSRAVKQLFLCNNQLDEKSLLYLIEGFPMALKEINLGNNV 302 Query: 330 LIKEGLALGVSTKVELSTLLLSPINNGAEG 419 L K G ++ + + S L + N G Sbjct: 303 LGKRGASIIANHISKFSNLKTLNLQNNLLG 332