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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920342
Clone id YMU001_000136_A04
Library
Length 569
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCTGAGGTAACACGACCTATCAAAAGCCATTCTCCATCAAGCATCTCTTCAAAAAAGACT
TCAAAAACACGAGCATGAGTACCACAGCTTGCATGTAAATGAGAAGAGGTATAGAACTTT
AGCCCACATCATCATTAGTGGTAAGCATCTCCTCTTCATCTTTAGTAGATCTGGCCCTTG
AAAACATATCTGCTACTACAGGGTTACCTATGCTTGCAATGTGACAAAACTTTGGGTTAA
GAGACTTAATAAAGGCTATCCATCGCATTGCAATGTTTGGAGTAGTGCAGTTTGCAATCA
TCCCTACTAATGGTAAACAATTTGTCTCTACCGCAATTGAAGCACCAATGAAATATTCTT
TGTCAAACCTCAGGGCAATAGCAACACCCCAAAGTTCTCTCTTAACCTGTGGGTAACCTC
TTTGACAAGCATTAAGCACTTTTGCTCCAAACGAGAATGCATACTTATGACCATCTTCAT
CATCTTGGCCTATAGCCTACTCGATATCTATTTGACTAGTGTCAACGGTTAAGATCACTG
GCCTTTTGTGCTTATAGTCAACCTCTCTC
■■Homology search results ■■ -
sp_hit_id Q3B7T3
Definition sp|Q3B7T3|BEAN_HUMAN Protein BEAN OS=Homo sapiens
Align length 67
Score (bit) 33.5
E-value 0.76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920342|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_A04.
         (569 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3B7T3|BEAN_HUMAN Protein BEAN OS=Homo sapiens GN=BEAN PE=2 SV=2    33   0.76 
sp|Q9EQG5|BEAN_MOUSE Protein BEAN OS=Mus musculus GN=Bean PE=1 SV=2    30   6.4  

>sp|Q3B7T3|BEAN_HUMAN Protein BEAN OS=Homo sapiens GN=BEAN PE=2 SV=2
          Length = 259

 Score = 33.5 bits (75), Expect = 0.76
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
 Frame = +2

Query: 50  QKRLQKHEHEYHSLHVN-----EKRYRTLAHIIISGKHLLFIFSRSGP*KHICYYRVTYA 214
           Q RLQ+H H +H  H +      +R+R   H  +S +H    +SRS         R+ YA
Sbjct: 64  QARLQRHRHRHHRHHHHHHHHRRRRHREYEHGYVSDEH---TYSRSS-------RRMRYA 113

Query: 215 CNVTKLW 235
           C+ ++ W
Sbjct: 114 CSSSEDW 120


>sp|Q9EQG5|BEAN_MOUSE Protein BEAN OS=Mus musculus GN=Bean PE=1 SV=2
          Length = 255

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = +2

Query: 50  QKRLQKHEHEYHSLHVNEKRYRTLAHIIISGKHLLFIFSRSGP*KHICYYRVTYACNVTK 229
           Q R+Q+H H +   H + +  R       SG H     SRS P       R+ YAC+  +
Sbjct: 65  QARIQRHHHRHRRHHHHHRHRRRRHREYASGGH---THSRSSP-------RMPYACSPAE 114

Query: 230 LW 235
            W
Sbjct: 115 DW 116
tr_hit_id A9SEB1
Definition tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 76
Score (bit) 87.8
E-value 4.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920342|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_A04.
         (569 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment) OS=Physcomit...    88   4e-16
tr|A5B0D4|A5B0D4_VITVI Putative uncharacterized protein OS=Vitis...    63   1e-08
tr|A5C647|A5C647_VITVI Putative uncharacterized protein OS=Vitis...    62   3e-08
tr|A8PI98|A8PI98_COPC7 Putative uncharacterized protein OS=Copri...    62   3e-08
tr|A5BZ59|A5BZ59_VITVI Putative uncharacterized protein OS=Vitis...    61   4e-08
tr|A5BLH3|A5BLH3_VITVI Putative uncharacterized protein OS=Vitis...    59   1e-07
tr|A5AH79|A5AH79_VITVI Putative uncharacterized protein OS=Vitis...    59   1e-07
tr|A5BNG4|A5BNG4_VITVI Putative uncharacterized protein OS=Vitis...    59   2e-07
tr|A5AXE9|A5AXE9_VITVI Putative uncharacterized protein OS=Vitis...    59   2e-07
tr|A5AH70|A5AH70_VITVI Putative uncharacterized protein OS=Vitis...    59   2e-07
tr|A5B4W9|A5B4W9_VITVI Putative uncharacterized protein OS=Vitis...    59   2e-07
tr|A5BH24|A5BH24_VITVI Putative uncharacterized protein OS=Vitis...    58   3e-07
tr|A5BM14|A5BM14_VITVI Putative uncharacterized protein OS=Vitis...    58   4e-07
tr|A5BKN7|A5BKN7_VITVI Putative uncharacterized protein OS=Vitis...    58   4e-07
tr|A5B854|A5B854_VITVI Putative uncharacterized protein OS=Vitis...    58   4e-07
tr|A5C6R3|A5C6R3_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|A5C3J0|A5C3J0_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|A5C050|A5C050_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|A5BW97|A5BW97_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|A5BRC0|A5BRC0_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|A5BJ16|A5BJ16_VITVI Putative uncharacterized protein (Fragmen...    57   5e-07
tr|A5BH44|A5BH44_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|A5AUS8|A5AUS8_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|A5ASZ3|A5ASZ3_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|A5B4H1|A5B4H1_VITVI Putative uncharacterized protein OS=Vitis...    57   7e-07
tr|A5AYI6|A5AYI6_VITVI Putative uncharacterized protein OS=Vitis...    57   7e-07
tr|A5ACN5|A5ACN5_VITVI Putative uncharacterized protein OS=Vitis...    57   7e-07
tr|A5C0G4|A5C0G4_VITVI Putative uncharacterized protein OS=Vitis...    57   9e-07
tr|A5BIB1|A5BIB1_VITVI Putative uncharacterized protein OS=Vitis...    57   9e-07
tr|A5BG10|A5BG10_VITVI Putative uncharacterized protein (Fragmen...    57   9e-07

>tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_46806 PE=4 SV=1
          Length = 75

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = -2

Query: 403 KRELWGVAIALRFDKEYFIGASIAVETNCLPLVGMIANCTTPNIAM-RWIAFIKSLNPKF 227
           KRELW V  A++ +K+Y IGA + +ET+CLPL+GMI N +TP+IAM RWIA+IKSLN +F
Sbjct: 1   KRELWRVVSAMKAEKDYLIGAVVVIETDCLPLLGMITNWSTPDIAMLRWIAYIKSLNLEF 60

Query: 226 CHIASIGNPVVADMFS 179
            H+    N +VADM S
Sbjct: 61  KHVTEKDN-LVADMLS 75


>tr|A5B0D4|A5B0D4_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_002499 PE=4 SV=1
          Length = 1633

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 49/148 (33%), Positives = 68/148 (45%)
 Frame = -2

Query: 541  PVILTVDTSQIDIE*AIGQDDEDGHKYAFSFGAKVLNACQRGYPQVKRELWGVAIALRFD 362
            P  L  D S   I   +GQ  EDG  YA  +G+K LN  QR Y   K+EL  V  AL   
Sbjct: 1037 PFELMCDASDFAIGAVLGQR-EDGKPYAIYYGSKTLNEAQRNYTTTKKELLAVVFALDKF 1095

Query: 361  KEYFIGASIAVETNCLPLVGMIANCTTPNIAMRWIAFIKSLNPKFCHIASIGNPVVADMF 182
            + Y +G+ I V T+   L  ++         +RWI F++  + +      + N VVAD  
Sbjct: 1096 RAYLVGSFIIVFTDHSALKYLLTKQDAKARLIRWILFLQEFDLQIKDKKRVEN-VVADHL 1154

Query: 181  SRARSTKDEEEMLTTNDDVG*SSIPLLI 98
            SR   T +    L  NDD    S+  L+
Sbjct: 1155 SRLVITHNSHP-LPINDDFPEESLMFLV 1181


>tr|A5C647|A5C647_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_019683 PE=4 SV=1
          Length = 2103

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 45/140 (32%), Positives = 65/140 (46%)
 Frame = -2

Query: 547  KRPVILTVDTSQIDIE*AIGQDDEDGHKYAFSFGAKVLNACQRGYPQVKRELWGVAIALR 368
            K P  +  D S +D+   +GQ  EDG  Y   + +K LN  QR Y   ++EL  V  AL 
Sbjct: 1230 KLPFEVMCDASDLDMGAVLGQR-EDGKPYVIYYASKTLNEAQRNYTTTEKELLAVVFALD 1288

Query: 367  FDKEYFIGASIAVETNCLPLVGMIANCTTPNIAMRWIAFIKSLNPKFCHIASIGNPVVAD 188
              + Y +G+SI V T+   L  ++         +RWI  ++  N +      + N VVAD
Sbjct: 1289 KFRAYLVGSSIVVFTDHSALKYLLTKQDAKARLIRWILLLQEFNLQIRDKKGVEN-VVAD 1347

Query: 187  MFSRARSTKDEEEMLTTNDD 128
              SR   + D    L  NDD
Sbjct: 1348 HLSRLVISHDSHG-LPINDD 1366


>tr|A8PI98|A8PI98_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_13271 PE=4 SV=1
          Length = 1047

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
 Frame = -2

Query: 568 REVDYKHKRPVILTVDTSQIDIE*AIGQDDEDGHKYAFSFGAKVLNACQRGYPQVKRELW 389
           R +D++  R +IL VD+S       + Q  EDG +Y   +G+   N  +R Y Q K EL+
Sbjct: 384 RPIDHESGREIILAVDSSIYGCGWVLSQLGEDGKRYPSRYGSITWNETERNYSQAKYELF 443

Query: 388 GVAIALRFDKEYFIG-ASIAVETNCLPLVGMIAN--CTTPNIAMRWIAFIKSLNPKFCHI 218
           G+  AL+  + +      + VE++   + GMI N  C       RWIA I   +  F HI
Sbjct: 444 GILRALKAVRIFIASPCPLVVESDAKYVKGMINNPDCIPNATLNRWIAGILMFDFTFRHI 503

Query: 217 ASIGNPVVADMFSRARSTKDEEE 149
           A   N   AD  SR   + ++ +
Sbjct: 504 AR-KNHTAADGLSRREVSPNDND 525


>tr|A5BZ59|A5BZ59_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_015007 PE=4 SV=1
          Length = 614

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 46/149 (30%), Positives = 67/149 (44%)
 Frame = -2

Query: 547 KRPVILTVDTSQIDIE*AIGQDDEDGHKYAFSFGAKVLNACQRGYPQVKRELWGVAIALR 368
           K P  +  D S   I   +GQ  EDG  Y   + +K LN  QR Y  +++EL  +  AL 
Sbjct: 64  KLPFEVMCDASDFAIGAVLGQR-EDGKPYVIYYASKTLNEAQRNYTTIEKELLAIVFALD 122

Query: 367 FDKEYFIGASIAVETNCLPLVGMIANCTTPNIAMRWIAFIKSLNPKFCHIASIGNPVVAD 188
               Y +G  I V TN   L  ++         +RWI  ++  N +      + N V+AD
Sbjct: 123 KFHAYLVGFFIIVFTNHSALKYLLTKQDAKARLIRWILLLQEFNLQIRDKKGVEN-VIAD 181

Query: 187 MFSRARSTKDEEEMLTTNDDVG*SSIPLL 101
             SR   T +   +L+ NDD    S+ LL
Sbjct: 182 HLSRLAITHN-SHVLSINDDFSEESLMLL 209


>tr|A5BLH3|A5BLH3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_031915 PE=4 SV=1
          Length = 743

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 42/132 (31%), Positives = 61/132 (46%)
 Frame = -2

Query: 523 DTSQIDIE*AIGQDDEDGHKYAFSFGAKVLNACQRGYPQVKRELWGVAIALRFDKEYFIG 344
           D S + +   +GQ  EDG  Y   + +K LN  QR Y   ++EL  V  AL   + Y +G
Sbjct: 158 DASDLTMGAVLGQR-EDGKPYVIYYASKTLNEAQRNYTTTEKELLAVVFALDKFRAYLVG 216

Query: 343 ASIAVETNCLPLVGMIANCTTPNIAMRWIAFIKSLNPKFCHIASIGNPVVADMFSRARST 164
           +S+ V T+   L  ++         +RWI  ++  N +  H   + N VVAD  SR    
Sbjct: 217 SSVVVFTDHSTLKYLLTKQDAKARLIRWILLLQEFNLQIRHKNGVEN-VVADHLSRLVIA 275

Query: 163 KDEEEMLTTNDD 128
            D    L  NDD
Sbjct: 276 HDSHG-LPINDD 286


>tr|A5AH79|A5AH79_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_022969 PE=4 SV=1
          Length = 1703

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 44/140 (31%), Positives = 64/140 (45%)
 Frame = -2

Query: 547  KRPVILTVDTSQIDIE*AIGQDDEDGHKYAFSFGAKVLNACQRGYPQVKRELWGVAIALR 368
            K P  +  D+S + +   +GQ  EDG  Y   + +K LN  QR Y   ++EL  V  AL 
Sbjct: 1140 KLPFAVMCDSSDLAMGAVLGQR-EDGKPYVIYYASKTLNEAQRNYTTTEKELLAVVFALD 1198

Query: 367  FDKEYFIGASIAVETNCLPLVGMIANCTTPNIAMRWIAFIKSLNPKFCHIASIGNPVVAD 188
              + Y +G+SI V T+   L  ++         +RWI  ++  N +      + N VVAD
Sbjct: 1199 KFRAYLVGSSIVVFTDHSALKYLLTKQDAKARLIRWILLLQEFNLQIRDKKGVEN-VVAD 1257

Query: 187  MFSRARSTKDEEEMLTTNDD 128
              SR     D    L  NDD
Sbjct: 1258 HLSRLVIAHDSHG-LPINDD 1276


>tr|A5BNG4|A5BNG4_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_044110 PE=4 SV=1
          Length = 1871

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 44/140 (31%), Positives = 64/140 (45%)
 Frame = -2

Query: 547  KRPVILTVDTSQIDIE*AIGQDDEDGHKYAFSFGAKVLNACQRGYPQVKRELWGVAIALR 368
            K P  +  D+S + +   +GQ  EDG  Y   + +K LN  QR Y   ++EL  V  AL 
Sbjct: 1212 KLPFEVMCDSSDLAMGAVLGQX-EDGKPYVIYYASKTLNEAQRNYTTTEKELLAVVFALD 1270

Query: 367  FDKEYFIGASIAVETNCLPLVGMIANCTTPNIAMRWIAFIKSLNPKFCHIASIGNPVVAD 188
              + Y +G+SI V T+   L  ++         +RWI  ++  N +      + N VVAD
Sbjct: 1271 KFRAYLVGSSIVVFTDHSXLKYLLTKQDAKARLIRWILLLQEFNLQIRDKKGVEN-VVAD 1329

Query: 187  MFSRARSTKDEEEMLTTNDD 128
              SR     D    L  NDD
Sbjct: 1330 HLSRLVIAHDSHG-LPINDD 1348


>tr|A5AXE9|A5AXE9_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_024050 PE=4 SV=1
          Length = 1566

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 45/147 (30%), Positives = 67/147 (45%)
 Frame = -2

Query: 541  PVILTVDTSQIDIE*AIGQDDEDGHKYAFSFGAKVLNACQRGYPQVKRELWGVAIALRFD 362
            P  +  D S   I   +GQ  EDG  Y   + +K LN  QR Y  +++EL  V  AL   
Sbjct: 1014 PFEVMCDASDFAIGATLGQR-EDGKPYVIYYASKTLNEAQRNYTTIEKELLAVVFALDKF 1072

Query: 361  KEYFIGASIAVETNCLPLVGMIANCTTPNIAMRWIAFIKSLNPKFCHIASIGNPVVADMF 182
            + Y +G+ I V T+   L  ++         +RWI  ++  + +      + N VVAD F
Sbjct: 1073 RAYLVGSFIIVFTDHSALKYLLTKQDAKARLIRWILLLQEFDVQIRDKKGVEN-VVADHF 1131

Query: 181  SRARSTKDEEEMLTTNDDVG*SSIPLL 101
            SR  +      +L  NDD    S+ LL
Sbjct: 1132 SRL-AIAHNSHVLPINDDFPEESLMLL 1157


>tr|A5AH70|A5AH70_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_032754 PE=4 SV=1
          Length = 2203

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 47/147 (31%), Positives = 66/147 (44%)
 Frame = -2

Query: 541  PVILTVDTSQIDIE*AIGQDDEDGHKYAFSFGAKVLNACQRGYPQVKRELWGVAIALRFD 362
            P  +  D+S   I   +GQ  EDG  Y   + +K LN  QR Y   ++EL  V  AL   
Sbjct: 1253 PFEVMCDSSDYAIGAVLGQR-EDGKPYVIYYASKSLNDAQRNYTTTEKELLAVVYALDKF 1311

Query: 361  KEYFIGASIAVETNCLPLVGMIANCTTPNIAMRWIAFIKSLNPKFCHIASIGNPVVADMF 182
            + Y IG+SI V T+   L  ++         +RWI  ++  N +      + N VVAD  
Sbjct: 1312 RAYLIGSSIVVFTBHSALKYLLTKQDAKARLIRWILLLQEFNLQIRDKKGVEN-VVADHL 1370

Query: 181  SRARSTKDEEEMLTTNDDVG*SSIPLL 101
            SR     D    L  NDD    S+ L+
Sbjct: 1371 SRLNIAHDTHG-LPINDDFPEESLMLV 1396