BP920345
Clone id YMU001_000136_A07
Library
Length 336
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCAAGCATGATTGCCGGCACCATACAGATGCATTCGGTGGAGTCTATAACTGGCGAGAAA
GACATACTGCAGACGCTAAAGAATACTGCTCACAGCAAGCTTATTCATGAGGACAATTAA
CATTTCTCTAATATTAAGATTTTTTTGCTAATTGTAGAGTTTGCTCTTAATTTCAGCTTT
TTCCAGCATTTCTGTCAGCCAATTGTGGATGCGTAGTTGAAGAGAACAGCTCAAGCTACT
GTCTGTGGTGAGCTGGGTTTGACGGTATAGCATGGGCTTGATCCTCTGCTGAGATGTACG
CTAGCTGACCATGTATGGGTGTAGTTGAAGTGTGGA
■■Homology search results ■■ -
sp_hit_id Q54ES9
Definition sp|Q54ES9|TCPB_DICDI T-complex protein 1 subunit beta OS=Dictyostelium discoideum
Align length 44
Score (bit) 32.0
E-value 0.99
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920345|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_A07.
(336 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54ES9|TCPB_DICDI T-complex protein 1 subunit beta OS=Dictyos... 32 0.99

>sp|Q54ES9|TCPB_DICDI T-complex protein 1 subunit beta
OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1
Length = 532

Score = 32.0 bits (71), Expect = 0.99
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1

Query: 10 IAGTIQMHSVESITGEKDILQTLKNTAHSKLIHEDN*HFSNIKI 141
+ + Q HS + + +D+L + T SK++H + HF+N+ +
Sbjct: 140 LQSSTQDHSSDKVKFREDLLNIARTTLSSKILHTEKDHFANMVV 183


tr_hit_id A3LYX7
Definition tr|A3LYX7|A3LYX7_PICST Protein (LSR1 protein) OS=Pichia stipitis
Align length 49
Score (bit) 36.2
E-value 0.85
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920345|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_A07.
(336 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3LYX7|A3LYX7_PICST Protein (LSR1 protein) OS=Pichia stipitis... 36 0.85
tr|Q5A369|Q5A369_CANAL Potential ultradian oscillation regulator... 35 1.4
tr|A5DJL8|A5DJL8_PICGU Putative uncharacterized protein OS=Pichi... 35 2.5
tr|A5E101|A5E101_LODEL Putative uncharacterized protein OS=Lodde... 34 3.2

>tr|A3LYX7|A3LYX7_PICST Protein (LSR1 protein) OS=Pichia stipitis
GN=GTS1 PE=4 SV=2
Length = 444

Score = 36.2 bits (82), Expect = 0.85
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -3

Query: 325 TTPIHGQLAYISAEDQAHAIPSNPAHHRQ*LELFSSTTHPQLADRNAGK 179
T PI GQ++Y+ A Q + P+NP H +Q L+ ++PQL + K
Sbjct: 313 TDPITGQVSYVDANGQQYLDPTNPQHQQQLLQ----QSNPQLIAQQTNK 357


>tr|Q5A369|Q5A369_CANAL Potential ultradian oscillation regulator
OS=Candida albicans GN=GTS1 PE=4 SV=1
Length = 416

Score = 35.4 bits (80), Expect = 1.4
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -3

Query: 325 TTPIHGQLAYISAEDQAHAIPSNPAHHRQ*LELFSSTTHPQLADRNAGK 179
T P+ GQ++YI + Q + P+NP H Q +++ ++PQL + K
Sbjct: 293 TDPVTGQISYIDSNGQEYLDPNNPQHQNQLMQM----SNPQLIAQQTNK 337


>tr|A5DJL8|A5DJL8_PICGU Putative uncharacterized protein OS=Pichia
guilliermondii GN=PGUG_03469 PE=4 SV=2
Length = 435

Score = 34.7 bits (78), Expect = 2.5
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3

Query: 325 TTPIHGQLAYISAEDQAHAIPSNPAHHRQ*LELFSSTTHPQLADRNAGK 179
T PI GQ++YI A Q + +NP H +L + T+PQL + K
Sbjct: 297 TDPITGQVSYIDANGQQYLDTNNPQHQ----QLLAQQTNPQLIAQQTNK 341


>tr|A5E101|A5E101_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_03288 PE=4 SV=1
Length = 445

Score = 34.3 bits (77), Expect = 3.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -3

Query: 325 TTPIHGQLAYISAEDQAHAIPSNPAHHRQ*LELFSSTTHPQLADRNAGK 179
T P+ GQ+ Y+ + Q + P+NP H +Q + + ++PQL + K
Sbjct: 308 TDPVTGQITYVDSNGQEYLDPNNPQHQQQLMNI----SNPQLIAQQTNK 352