BP920347
Clone id YMU001_000136_A11
Library
Length 482
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTGCTTGAAAAGTTGCCATCGATGGTTCAATTTAGTCGTAGCTCGTCACAAACA
ACAATCCTGTGCCCTTCACAAAGTCCCCTTTAAAAAATGTTGTAGACTTTTAGACTACCA
ATTTTCAACTAAATCCAGCAGTGTGTGTCTGTATCTCCCTACTAGCCTACAAATCCTCTG
AAAAACTTAGGAAAACCTTGACTCGGTTCAAGAGCGTCCCCTTCATGGGGCCAGATCCCG
CCGCATAATACTCTCAGCATACCTAATTGAACCTGCCTATGGCAAAACATGCTAGCATCC
TGCCACATGCTTGCCCCTCTATGTGCACATATACTCACACATGAACCATTGGTGTTATTG
CATGTGCACAAGCATGAATGCACACTCCTGCTGTGAAAAAGACTTGGTGCATGGTCCCCT
GGATGCACTTTCAATGGAGCGCCGTAAAGGTGCTCTTATTTGGTGAGTACCGGCTCTCTA
AC
■■Homology search results ■■ -
sp_hit_id Q8N1N5
Definition sp|Q8N1N5|CRPAK_HUMAN Cysteine-rich PAK1 inhibitor OS=Homo sapiens
Align length 32
Score (bit) 25.4
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920347|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_A11.
(482 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8N1N5|CRPAK_HUMAN Cysteine-rich PAK1 inhibitor OS=Homo sapie... 25 7.1
sp|P15781|PSPB_BOVIN Pulmonary surfactant-associated protein B O... 30 7.5
sp|O08523|TECTA_MOUSE Alpha-tectorin OS=Mus musculus GN=Tecta PE... 29 9.8

>sp|Q8N1N5|CRPAK_HUMAN Cysteine-rich PAK1 inhibitor OS=Homo sapiens
GN=CRIPAK PE=1 SV=1
Length = 446

Score = 25.4 bits (54), Expect(2) = 7.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3

Query: 324 CTYTHT*TIGVIACAQA*MHTPAVKKTWCMVP 419
C HT GV AC++A M P C VP
Sbjct: 299 CPPAHTCRRGVPACSRAHMECPPAHTCHCGVP 330



Score = 22.3 bits (46), Expect(2) = 7.1
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = +1

Query: 232 QIPPHNTLSIPN*TC----LWQNMLASCHMLAPLCAHI 333
+ PP +T C +W L +C P C+H+
Sbjct: 227 ECPPAHTCRCGVPACSHVPMWSARLLTCRCGVPACSHV 264


>sp|P15781|PSPB_BOVIN Pulmonary surfactant-associated protein B
OS=Bos taurus GN=SFTPB PE=1 SV=3
Length = 373

Score = 29.6 bits (65), Expect = 7.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1

Query: 307 MLAPLCAHIL-THEPLVLLHVHKHECTLLL*KRLGAWSP 420
+LAPLC H+L T+ PL++ H H + + +G P
Sbjct: 106 LLAPLCRHLLDTYFPLIIEHFQSHMNPKFICQHVGLCKP 144


>sp|O08523|TECTA_MOUSE Alpha-tectorin OS=Mus musculus GN=Tecta PE=1
SV=1
Length = 2155

Score = 29.3 bits (64), Expect = 9.8
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Frame = -1

Query: 389 RSVHSCLCTC--NNTNGSCVSICAHRGAS--MWQDASMFCHRQVQLGMLRVLCGG--IWP 228
R+ SC TC N+ SCVS+C R A+ + D + +C Q VL G I P
Sbjct: 1363 RNYTSCSVTCPPNSHYESCVSVCQPRCAAIRLKSDCNHYCVEGCQCDAGYVLNGKSCILP 1422

Query: 227 H------EGDALEPSQGF 192
H +G EP Q F
Sbjct: 1423 HNCGCYSDGKYYEPKQLF 1440


tr_hit_id B4SRH3
Definition tr|B4SRH3|B4SRH3_STRM5 Putative uncharacterized protein OS=Stenotrophomonas maltophilia (strain R551-3)
Align length 60
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920347|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_A11.
(482 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4SRH3|B4SRH3_STRM5 Putative uncharacterized protein OS=Steno... 35 2.4
tr|B2FPU2|B2FPU2_STRMK Putative uncharacterized protein OS=Steno... 35 2.4
tr|B6L8I9|B6L8I9_BRAFL Putative uncharacterized protein OS=Branc... 33 5.4
tr|A7PAJ5|A7PAJ5_VITVI Chromosome chr14 scaffold_9, whole genome... 29 10.0

>tr|B4SRH3|B4SRH3_STRM5 Putative uncharacterized protein
OS=Stenotrophomonas maltophilia (strain R551-3)
GN=Smal_2938 PE=4 SV=1
Length = 134

Score = 34.7 bits (78), Expect = 2.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -1

Query: 437 PLKVHPGDHAPSLFHSRSVHSCLCTCNNTNGSCVSICA-HRGASMWQDASMFCHRQVQLG 261
P+ + PGDH P F SR H N G C +I H +++ C RQ +G
Sbjct: 51 PVLLQPGDHVPGQFLSRDTHGRAVMARNEEGWCAAIDPYHLRCTIYSQRPAIC-RQFSMG 109


>tr|B2FPU2|B2FPU2_STRMK Putative uncharacterized protein
OS=Stenotrophomonas maltophilia (strain K279a)
GN=Smlt3510 PE=4 SV=1
Length = 128

Score = 34.7 bits (78), Expect = 2.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -1

Query: 437 PLKVHPGDHAPSLFHSRSVHSCLCTCNNTNGSCVSICA-HRGASMWQDASMFCHRQVQLG 261
P+ + PGDH P F SR H N G C +I H +++ C RQ +G
Sbjct: 45 PVLLQPGDHVPGQFLSRDTHGRAVMARNEEGWCAAIDPYHLRCTIYSQRPAIC-RQFSMG 103


>tr|B6L8I9|B6L8I9_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_118458 PE=4 SV=1
Length = 1375

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = -1

Query: 380 HSCLCT--CNNTNGSCVSICAHRGASMWQDASMFCHRQVQLGMLRVLCGGIWPHEGDALE 207
HSC+ C ++NG C C + S + +C R L R C I GD E
Sbjct: 301 HSCVDVNECGSSNGGCEHYCQNDRGSY----NCYCRRGYNLAANRKKCREITCPRGDVFE 356

Query: 206 PSQG 195
P+ G
Sbjct: 357 PTHG 360


>tr|A7PAJ5|A7PAJ5_VITVI Chromosome chr14 scaffold_9, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00038141001
PE=4 SV=1
Length = 161

Score = 29.3 bits (64), Expect(2) = 10.0
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +2

Query: 5 FCLKSCHRWFNLVVARHKQQSCALHKVPFKKCCRLLDYQFSTKS--SSVCLYLPTSLQIL 178
FC W + + +R K +C L K F ++ D +S + S Y P++ IL
Sbjct: 30 FCYSCIQSWADHMASRRKTATCPLCKASFVSITKVDDAAYSDQKIYSQTIPYAPSTSDIL 89

Query: 179 *KT*ENLDSVQERPLHGAR 235
+ + QE P GA+
Sbjct: 90 ------ILADQESPSFGAQ 102



Score = 22.3 bits (46), Expect(2) = 10.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1

Query: 283 QNMLASCHMLAPLCAHILTHEPLVL 357
+++L SCH+ C H +P +L
Sbjct: 119 EDLLVSCHLCRIRCVHSYCLDPPLL 143