BP920350 |
Clone id |
YMU001_000136_B02 |
Library |
YMU01 |
Length |
487 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000136_B02. |
Accession |
BP920350 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GGCTTGGTGAATAAGGAGGGAGTGTGATGAAGTCTGGAGCGGTAAAGCAGAAATGGACAC CTGAAGAGGAGAGTGCCCTCCGTGCTGGGGTTGAGAAGTACGGTGCTGGAAAATGGAGAG CCATACAGAAAGATGCCGACTTTGGCTTTTGCCTTATCTCGCGCTCCAATGTCGATCTTA AGGATAAATGGCGCAATATGAGTGTAAGTGCAAATGGATTGGGCTCAAGAGAGAGGGCAG CAAGAATTCTAGCAGCCAAGATGAAACAAGTTGGAACAACTCCAAGAGATTTAGGAACAT CAGGGACAGTGGCAGATGTTCTTTCTATCTCAAGTGTGGCAGAGGACAAAAAGCTTTTAG GTGCCAGATTTGATCATTTGATCTTAGAAGCAATTTTGAACCTTCAAGATACAAACGGAG GCAGTAAGGGACGGATTGCAAGCTATNTAGAGAGTCATTATCCTGTTCCATCCAACTTCA GAAGACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q15554 |
Definition |
sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens |
Align length |
52 |
Score (bit) |
56.6 |
E-value |
6.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T749 |
Definition |
tr|A9T749|A9T749_PHYPA Single myb histone protein OS=Physcomitrella patens subsp. patens |
Align length |
158 |
Score (bit) |
158.0 |
E-value |
1.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920350|Adiantum capillus-veneris mRNA, clone: YMU001_000136_B02. (487 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T749|A9T749_PHYPA Single myb histone protein OS=Physcomitre... 158 1e-37 tr|A7QL84|A7QL84_VITVI Chromosome chr3 scaffold_117, whole genom... 140 3e-32 tr|B8LR63|B8LR63_PICSI Putative uncharacterized protein OS=Picea... 137 3e-31 tr|A7R475|A7R475_VITVI Chromosome undetermined scaffold_623, who... 129 5e-29 tr|Q6WS85|Q6WS85_MAIZE Single myb histone 1 (Putative uncharacte... 129 9e-29 tr|A5CB69|A5CB69_VITVI Putative uncharacterized protein OS=Vitis... 129 9e-29 tr|B6TMI8|B6TMI8_MAIZE Single myb histone 1 OS=Zea mays PE=2 SV=1 128 2e-28 tr|A9RBA4|A9RBA4_PHYPA Single myb histone protein OS=Physcomitre... 125 1e-27 tr|Q8S270|Q8S270_ORYSJ Putative single myb histone 6 (Putative u... 123 4e-27 tr|Q0JLM2|Q0JLM2_ORYSJ Os01g0589300 protein OS=Oryza sativa subs... 123 4e-27 tr|A2WRZ9|A2WRZ9_ORYSI Putative uncharacterized protein OS=Oryza... 123 4e-27 tr|Q2QM89|Q2QM89_ORYSJ Os12g0613300 protein OS=Oryza sativa subs... 123 5e-27 tr|B8BMZ7|B8BMZ7_ORYSI Putative uncharacterized protein OS=Oryza... 123 5e-27 tr|B4FT40|B4FT40_MAIZE Putative uncharacterized protein OS=Zea m... 123 5e-27 tr|A3CJE3|A3CJE3_ORYSJ Putative uncharacterized protein OS=Oryza... 123 5e-27 tr|A7PE46|A7PE46_VITVI Chromosome chr11 scaffold_13, whole genom... 121 1e-26 tr|B8A8C4|B8A8C4_ORYSI Putative uncharacterized protein OS=Oryza... 120 4e-26 tr|Q8W119|Q8W119_MAIZE Histone H1-like protein OS=Zea mays GN=ho... 119 6e-26 tr|Q6WLH2|Q6WLH2_MAIZE Single myb histone 4 OS=Zea mays GN=Smh4 ... 119 6e-26 tr|Q9LPL9|Q9LPL9_ARATH F2J10.16 protein OS=Arabidopsis thaliana ... 119 7e-26 tr|Q8VX39|Q8VX39_ARATH Telomere repeat binding factor 1 OS=Arabi... 119 7e-26 tr|Q8VWK4|Q8VWK4_ARATH Telomere repeat binding factor 1 (MYB tra... 119 7e-26 tr|Q8LA70|Q8LA70_ARATH DNA-binding protein PcMYB1, putative OS=A... 119 7e-26 tr|Q8GUA0|Q8GUA0_ORYSJ MYB28 protein (Os01g0708000 protein) OS=O... 118 1e-25 tr|Q761Y7|Q761Y7_ORYSJ BRI1-KD interacting protein 127 (Fragment... 118 2e-25 tr|A7R7I0|A7R7I0_VITVI Chromosome undetermined scaffold_1796, wh... 116 5e-25 tr|Q8VX38|Q8VX38_ARATH Telomere repeat binding factor 2 OS=Arabi... 114 2e-24 tr|Q9FJW5|Q9FJW5_ARATH Similarity to MYB-like DNA-binding protei... 114 3e-24 tr|Q6WLH1|Q6WLH1_MAIZE Single myb histone 6 OS=Zea mays GN=Smh6 ... 113 4e-24 tr|Q2LMD5|Q2LMD5_MALDO MYBR6 OS=Malus domestica PE=2 SV=1 113 5e-24
>tr|A9T749|A9T749_PHYPA Single myb histone protein OS=Physcomitrella patens subsp. patens GN=SMH1501 PE=4 SV=1 Length = 345
Score = 158 bits (399), Expect = 1e-37 Identities = 83/158 (52%), Positives = 104/158 (65%), Gaps = 8/158 (5%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLKDKWRNMSVSAN 215 GA KQKWT EEE+ALRAGVEKYG GKWRAIQKD+ FG CL SRSNVDLKDKWRNMSVSAN Sbjct: 2 GAPKQKWTAEEEAALRAGVEKYGPGKWRAIQKDSKFGPCLTSRSNVDLKDKWRNMSVSAN 61
Query: 216 GLGSRERAARILAA----KMKQVGTTPRDLGTSGTVADVLSI----SSVAEDKKLLGARF 371 GLGS + I + + + L + D ++ + + D+K LG+R+ Sbjct: 62 GLGSARKPLAITGGPGMMTLMEDAVSVLPLAVLPPIDDAQALKRESADTSGDRKSLGSRY 121
Query: 372 DHLILEAILNLQDTNGGSKGRIASYXESHYPVPSNFRR 485 D ++ EA++ L++T G S IASY E + VPSNFRR Sbjct: 122 DDMVFEAVMGLKETYGSSNASIASYIEERHAVPSNFRR 159
>tr|A7QL84|A7QL84_VITVI Chromosome chr3 scaffold_117, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001485001 PE=4 SV=1 Length = 307
Score = 140 bits (353), Expect = 3e-32 Identities = 79/161 (49%), Positives = 99/161 (61%), Gaps = 11/161 (6%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLKDKWRNMSVSAN 215 GA KQKWTPEEE+AL+AGV K+GAGKWR I KD +F L RSNVDLKDKWRNMSV AN Sbjct: 2 GAPKQKWTPEEEAALKAGVVKHGAGKWRTILKDPEFSGVLFLRSNVDLKDKWRNMSVMAN 61
Query: 216 GLGSRERAARIL--AAKMKQVGTTPRDLGTS----GTVADVLSISSVAEDKKLLG----- 362 G GSRE+A L + P LGT+ D +++ + ++ G Sbjct: 62 GWGSREKARLALRKVPSAPKAEENPLSLGTAVQSDDETVDTKALALPSNPVQITGSKRSF 121
Query: 363 ARFDHLILEAILNLQDTNGGSKGRIASYXESHYPVPSNFRR 485 +R D+LILEAI NL++ G +K IA+Y E Y P NF+R Sbjct: 122 SRLDNLILEAITNLKEPGGSNKTTIATYIEDQYRAPPNFKR 162
>tr|B8LR63|B8LR63_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 298
Score = 137 bits (344), Expect = 3e-31 Identities = 77/162 (47%), Positives = 97/162 (59%), Gaps = 12/162 (7%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLKDKWRNMSVSAN 215 GA KQKWT EEE+ALR GVEKYG GKWRAI +D CL SRSNVDLKDKWRNMSV+AN Sbjct: 2 GAPKQKWTHEEEAALRTGVEKYGPGKWRAILRDPSLSLCLASRSNVDLKDKWRNMSVTAN 61
Query: 216 GLGSRERAARILAAKM-------KQVGTTPRDLGTSGTVADVLSISSV-----AEDKKLL 359 G GSRE+A L +Q+ + G V +++V + + K Sbjct: 62 GWGSREKARLALKRSKYIAKQSGRQLALSALSNGNMDVVVVTKPLTTVNPYLPSSNTKRS 121
Query: 360 GARFDHLILEAILNLQDTNGGSKGRIASYXESHYPVPSNFRR 485 +R D LIL+A+ L++ NG +K IA+Y E + P NFRR Sbjct: 122 ISRLDKLILDAVSTLKEPNGSNKSAIATYIEENQYPPPNFRR 163
>tr|A7R475|A7R475_VITVI Chromosome undetermined scaffold_623, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004199001 PE=4 SV=1 Length = 295
Score = 129 bits (325), Expect = 5e-29 Identities = 79/165 (47%), Positives = 96/165 (58%), Gaps = 15/165 (9%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLKDKWRNMSVSAN 215 GA KQKWT EEE+AL+AGV K+GAGKWR I D +F L RSNVDLKDKWRNM+V A+ Sbjct: 2 GAPKQKWTSEEEAALKAGVIKHGAGKWRTILMDPEFSTILHLRSNVDLKDKWRNMNVMAS 61
Query: 216 GLGSRERAARILAAKMKQVGTTPRDLGTSGTVADVLSISSVAEDKKLLG----------- 362 GLGSR RA LA K + TTP+ + ++ V+ D K L Sbjct: 62 GLGSRHRAK--LALKNQ---TTPKHHEEAMALSTVVQSGEEILDAKPLAISRGPLRIDGP 116
Query: 363 ----ARFDHLILEAILNLQDTNGGSKGRIASYXESHYPVPSNFRR 485 R D ILEAI NL+D +G +K IA Y E HY P NF++ Sbjct: 117 KKGITRLDSHILEAITNLKDPSGSNKTAIAMYIEEHYLAPPNFKK 161
>tr|Q6WS85|Q6WS85_MAIZE Single myb histone 1 (Putative uncharacterized protein) OS=Zea mays GN=Smh1 PE=2 SV=1 Length = 299
Score = 129 bits (323), Expect = 9e-29 Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 17/167 (10%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLKDKWRNMSVSAN 215 GA KQ+WTPEEE+AL+AGV K+G GKWR I +D+DF L RSNVDLKDKWRN+SV+A Sbjct: 2 GAPKQRWTPEEEAALKAGVAKHGPGKWRTILRDSDFSALLRLRSNVDLKDKWRNLSVTAG 61
Query: 216 GLGSRERAARILAAKMK---QVGTTPRDLGTS------GTVADVLSISSVAE-------- 344 G GSRE+A L + ++ P D+ T DV ++ E Sbjct: 62 GYGSREKARMALKKGRRVVPKLTAEPMDVDVKDMDDAHDTAIDVEPLAMAFESLPTEESP 121
Query: 345 DKKLLGARFDHLILEAILNLQDTNGGSKGRIASYXESHYPVPSNFRR 485 DK + AR D LILEAI L++ +G SK IA+Y E Y P++F+R Sbjct: 122 DKSV--ARLDDLILEAIRKLKEPSGPSKAAIAAYIEDQYWPPADFQR 166
>tr|A5CB69|A5CB69_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026626 PE=4 SV=1 Length = 221
Score = 129 bits (323), Expect = 9e-29 Identities = 74/150 (49%), Positives = 93/150 (62%), Gaps = 11/150 (7%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLKDKWRNMSVSAN 215 GA KQKWTPEEE+AL+AGV K+GAGKWR I KD +F L RSNVDLKDKWRNMSV AN Sbjct: 2 GAPKQKWTPEEEAALKAGVVKHGAGKWRTILKDPEFSGVLFLRSNVDLKDKWRNMSVMAN 61
Query: 216 GLGSRERAARIL--AAKMKQVGTTPRDLGTS----GTVADVLSISSVAEDKKLLG----- 362 G GSRE+A L + P LGT+ D +++ + ++ G Sbjct: 62 GWGSREKARLALRKVPSAPKAEENPLSLGTAVQSDDETVDTKALALPSNPVQITGSKRSF 121
Query: 363 ARFDHLILEAILNLQDTNGGSKGRIASYXE 452 +R D+LILEAI NL++ G +K IA+Y E Sbjct: 122 SRLDNLILEAITNLKEPGGSNKTTIATYIE 151
>tr|B6TMI8|B6TMI8_MAIZE Single myb histone 1 OS=Zea mays PE=2 SV=1 Length = 299
Score = 128 bits (321), Expect = 2e-28 Identities = 76/167 (45%), Positives = 99/167 (59%), Gaps = 17/167 (10%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLKDKWRNMSVSAN 215 GA K +WTPEEE+AL+AGV K+G GKWR I +D+DF L RSNVDLKDKWRN+SV+A Sbjct: 2 GAPKHRWTPEEEAALKAGVAKHGPGKWRTILRDSDFSALLRLRSNVDLKDKWRNLSVTAG 61
Query: 216 GLGSRERAARILAAKMK---QVGTTPRDLGTSG------TVADVLSISSVAE-------- 344 G GSRE+A L + ++ P D+ T DV ++ E Sbjct: 62 GYGSREKARMALKKGRRVVPKLTAEPMDVDVKNMDDAHDTAIDVEPLAMAFESLPTEESP 121
Query: 345 DKKLLGARFDHLILEAILNLQDTNGGSKGRIASYXESHYPVPSNFRR 485 DK + AR D LILEAI L++ +G SK IA+Y E Y P++F+R Sbjct: 122 DKSV--ARLDDLILEAIRKLKEPSGSSKAAIAAYIEDQYWPPADFQR 166
>tr|A9RBA4|A9RBA4_PHYPA Single myb histone protein OS=Physcomitrella patens subsp. patens GN=SMH1502 PE=4 SV=1 Length = 443
Score = 125 bits (313), Expect = 1e-27 Identities = 81/190 (42%), Positives = 98/190 (51%), Gaps = 51/190 (26%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLK----------- 182 GA KQKWT EEE+ALRAGVEKYG GKWRAIQKD+ FG CL SRSNVDLK Sbjct: 2 GAPKQKWTAEEEAALRAGVEKYGPGKWRAIQKDSKFGPCLTSRSNVDLKGTVSEVIKVFN 61
Query: 183 --------------------------------DKWRNMSVSANGLGSRERAARILAAK-- 260 DKWRNMSVSANGLGS + I A Sbjct: 62 FSFLRFVNGCKQRSCPAVSIRRAVSYRILNEMDKWRNMSVSANGLGSARKPLAITAGPGM 121
Query: 261 ---MKQVGTT-PRDLGTSGTVADVLSISS--VAEDKKLLGARFDHLILEAILNLQDTNGG 422 M+ V + P + G V+ S + D+K LG+R+D+++ EA+L L++ G Sbjct: 122 LTLMEDVASVKPLSVVAPGDEGYVVKRESADTSGDRKSLGSRYDNMVFEAVLGLKEPYGS 181
Query: 423 SKGRIASYXE 452 S IASY E Sbjct: 182 SNASIASYIE 191
>tr|Q8S270|Q8S270_ORYSJ Putative single myb histone 6 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0415C01.11 PE=4 SV=1 Length = 297
Score = 123 bits (309), Expect = 4e-27 Identities = 74/167 (44%), Positives = 96/167 (57%), Gaps = 17/167 (10%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLKDKWRNMSVSAN 215 GA KQ+WT EEE+AL+AGV K+G GKWR I +D +F L RSNVDLKDKWRN+SV+A Sbjct: 2 GAPKQRWTAEEEAALKAGVAKHGTGKWRTILRDPEFTALLRLRSNVDLKDKWRNLSVTAG 61
Query: 216 GLGSRERA----------ARILAAKMKQVGTTPR-------DLGTSGTVADVLSISSVAE 344 G GSRERA + LA M P D V + + + S E Sbjct: 62 GYGSRERARVALKGGKRGPKALAEPMDADEKNPDIDDNAIIDAQPLAVVVEPMQLESTPE 121
Query: 345 DKKLLGARFDHLILEAILNLQDTNGGSKGRIASYXESHYPVPSNFRR 485 +K + AR D LILEAI L++ +G ++ I+SY E Y P +F+R Sbjct: 122 KEKSV-ARLDDLILEAIKKLKEPSGSNRTTISSYIEEQYWPPEDFQR 167
>tr|Q0JLM2|Q0JLM2_ORYSJ Os01g0589300 protein OS=Oryza sativa subsp. japonica GN=Os01g0589300 PE=4 SV=1 Length = 300
Score = 123 bits (309), Expect = 4e-27 Identities = 74/167 (44%), Positives = 96/167 (57%), Gaps = 17/167 (10%) Frame = +3
Query: 36 GAVKQKWTPEEESALRAGVEKYGAGKWRAIQKDADFGFCLISRSNVDLKDKWRNMSVSAN 215 GA KQ+WT EEE+AL+AGV K+G GKWR I +D +F L RSNVDLKDKWRN+SV+A Sbjct: 2 GAPKQRWTAEEEAALKAGVAKHGTGKWRTILRDPEFTALLRLRSNVDLKDKWRNLSVTAG 61
Query: 216 GLGSRERA----------ARILAAKMKQVGTTPR-------DLGTSGTVADVLSISSVAE 344 G GSRERA + LA M P D V + + + S E Sbjct: 62 GYGSRERARVALKGGKRGPKALAEPMDADEKNPDIDDNAIIDAQPLAVVVEPMQLESTPE 121
Query: 345 DKKLLGARFDHLILEAILNLQDTNGGSKGRIASYXESHYPVPSNFRR 485 +K + AR D LILEAI L++ +G ++ I+SY E Y P +F+R Sbjct: 122 KEKSV-ARLDDLILEAIKKLKEPSGSNRTTISSYIEEQYWPPEDFQR 167
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