BP920354
Clone id YMU001_000136_B06
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTTTTTTACACAAATTATGACTTGGGTAATTTCCCGCAAAGACTCTGATAGGC
GCTTTTGTACATCATTAGTCATACATTGCCATAGCTCCCCCAACTACACACAGGCTGCAA
GCTTGCCTTTCCGTCATGCACTCATGCTCCCTACACAATGCACACAACAGGAGGTAGTAC
CTTTCCAATTTTCTAATATCTAAGCTCCTGAAGGCCATCCAAAAAGTAGCTAATAGCCTC
CATTACCTACGAGTTGATTCAAAATGTACATTGAGAGCATGCCCACACTGAGTAAACACA
GCCTTCTTATGAAGCAAACTTGTAGCGAGACTTAATGGAAAAAGTCGGCATTTGGAGAGG
AAGGCTTGCCCACATCCTCATTGGCTATCTTGCCTACACTGGCTAGATTCTTCCTCCCCT
TTACAGCATGCACATCTGATGGGTAAAGCCCATCCCCAAAGTCCTCCTGTGACCCTCCAT
TAGATGAGCCCTGCACTTGCAGAGCATACTGAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920354|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_B06.
(499 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A6C134
Definition tr|A6C134|A6C134_9PLAN Putative uncharacterized protein OS=Planctomyces maris DSM 8797
Align length 53
Score (bit) 35.4
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920354|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_B06.
(499 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6C134|A6C134_9PLAN Putative uncharacterized protein OS=Planc... 35 1.5
tr|Q6L3M9|Q6L3M9_SOLDE Integrase core domain containing protein ... 34 3.3
tr|Q8XRP9|Q8XRP9_RALSO Putative trna synthetase-related protein ... 33 5.7
tr|A7R456|A7R456_VITVI Chromosome undetermined scaffold_620, who... 33 7.4
tr|B6K983|B6K983_TOXGO Putative uncharacterized protein OS=Toxop... 33 7.4

>tr|A6C134|A6C134_9PLAN Putative uncharacterized protein
OS=Planctomyces maris DSM 8797 GN=PM8797T_05630 PE=4
SV=1
Length = 663

Score = 35.4 bits (80), Expect = 1.5
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2

Query: 308 VARLNGKSRHLERKACPHPHWLSCLHWLDSSSPLQHAHLMGKAHPQSPPVTLH 466
+ RL K+R++++ ACP P + HW S+ +Q A L AHP+ V LH
Sbjct: 469 IGRLKLKNRNVKQVACPAPGRFALYHW--GSAAVQIADLQDPAHPK---VVLH 516


>tr|Q6L3M9|Q6L3M9_SOLDE Integrase core domain containing protein
OS=Solanum demissum GN=SDM1_27t00004 PE=4 SV=2
Length = 1760

Score = 34.3 bits (77), Expect = 3.3
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 17/61 (27%)
Frame = +2

Query: 335 HLERKACPHPHWLSCLH---------WLDSSSPLQH--------AHLMGKAHPQSPPVTL 463
H ++ACPHPHW +H W P+ H A L+ K Q P +
Sbjct: 902 HTYKQACPHPHWREAMHAEFDALVRNWTWDLVPVTHSMNVVEYKARLVAKGFTQHPGLDF 961

Query: 464 H 466
H
Sbjct: 962 H 962


>tr|Q8XRP9|Q8XRP9_RALSO Putative trna synthetase-related protein
OS=Ralstonia solanacearum GN=RSp0782 PE=4 SV=1
Length = 650

Score = 33.5 bits (75), Expect = 5.7
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Frame = -2

Query: 447 LWGWALPI-RCACCKG----EEESSQCRQDSQ*GCGQA------FLSKCRLFPLSLATSL 301
LWG ALP+ RC C E+ +QC Q + G + F S C + P + +
Sbjct: 397 LWGQALPVWRCRGCGATVVAEDHPAQCGQCAGAGFEASPEVISIFFSCCLMGPSANPSGE 456

Query: 300 LHKKAVFTQCGHALNVHFESTRR*WRLLATFWMAFRSLDIRKL 172
L FT CGH + ++ S + + F SL + L
Sbjct: 457 LRNAVDFTVCGHDIYHYWGSLKNILACALGYEAGFGSLMVHGL 499


>tr|A7R456|A7R456_VITVI Chromosome undetermined scaffold_620, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00004177001 PE=4 SV=1
Length = 174

Score = 33.1 bits (74), Expect = 7.4
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2

Query: 441 GWALPIRCACCKGEEESS 388
GW+LP +C CKGEEES+
Sbjct: 134 GWSLPNKCYLCKGEEEST 151


>tr|B6K983|B6K983_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_113970 PE=4 SV=1
Length = 785

Score = 33.1 bits (74), Expect = 7.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2

Query: 363 GCGQAFLSKCRLFPLSLATSLL--HKKAVFTQCGHALNVHFESTR 235
GC + F S+CRLFPL L+ S L + + + C +L+ S R
Sbjct: 79 GCARRFSSRCRLFPLPLSASSLSSSRPSAVSVCSSSLSCSSASAR 123