BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920357|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_B09.
         (493 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4JUY8|FPG_CORJK Formamidopyrimidine-DNA glycosylase OS=Coryn...    31   3.5  
sp|P32487|LYP1_YEAST Lysine-specific permease OS=Saccharomyces c...    30   6.0  

>sp|Q4JUY8|FPG_CORJK Formamidopyrimidine-DNA glycosylase
           OS=Corynebacterium jeikeium (strain K411) GN=mutM PE=3
           SV=3
          Length = 288

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = -3

Query: 443 LRIRTVSCVKDQGHLMWLDF---FSLRVHL 363
           LR  TV+ VK +G  +WLDF   F L+VHL
Sbjct: 46  LRDATVTAVKRRGKFLWLDFGEDFLLQVHL 75


>sp|P32487|LYP1_YEAST Lysine-specific permease OS=Saccharomyces
           cerevisiae GN=LYP1 PE=1 SV=2
          Length = 611

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 457 YGSYSCGFVRSVVSRIRGISCGSTFSLSEFICSYI 353
           YG+Y   F  +V+  I+G      F +SEF  SYI
Sbjct: 519 YGAYYAAFFVTVIIFIQGFQAFCPFKVSEFFTSYI 553

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920357|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_B09.
         (493 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5WXM2|Q5WXM2_LEGPL Putative uncharacterized protein OS=Legio...    34   4.3  
tr|Q1CYC7|Q1CYC7_MYXXD Putative ABC transporter, permease protei...    33   5.5  

>tr|Q5WXM2|Q5WXM2_LEGPL Putative uncharacterized protein
           OS=Legionella pneumophila (strain Lens) GN=lpl1073 PE=4
           SV=1
          Length = 591

 Score = 33.9 bits (76), Expect = 4.3
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -1

Query: 487 LSLNRFVQVYYGSYSCGFVRSVVSRIRGISCGSTFSLSEFICSYILWCKTTIICRLLRSF 308
           LSL  +   YYG+    +++ VV     I+ G   ++ EF+ S +L   T  I R+ R F
Sbjct: 376 LSLKEYSSKYYGAVGMAWLQKVVENQPSIATGIADAMQEFVNSVVLPDSTGQIIRVARRF 435


>tr|Q1CYC7|Q1CYC7_MYXXD Putative ABC transporter, permease protein
           OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_6474 PE=4
           SV=1
          Length = 505

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = -3

Query: 263 RTLSIQFFPGYFLPSTT*WFSGREEA*PDHFNVLAHCSYLKIGVFAVADTVYRSLP 96
           R + +Q   G        W +GR+ + P+ F++L     L +G+F VAD   ++ P
Sbjct: 276 RAVGVQVLVGMLAGCAIWWLTGRKHSVPEMFSLLGGVHLLGVGMFVVADVDGQARP 331