BP920360
Clone id YMU001_000136_B12
Library
Length 571
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTGCAAAACAATCGAATGTATGCCTATCTTTCTTCTTCACTATCTTCATTAAGGCTTGT
TTTAGAAAGCCAAAAAGGTGAAGCAGGACGGTCCCACCCCATCCTACAGCACACACAGGC
ACTAAATTTTGTGCCCGAGTTTGCCGCCATCAATCTCACAGCTCCTAGGTCACTAGATAT
CCCATGAGAGATAGAGTTGAGCTATATATAGGGCATGACCCAACCTGAAATCAACAGGAT
AGACAGTCCAAAGAGCTTCTTGATGTCCAAACTCCAAAGGAAGAGACACTCATTCTCTTG
ATGTAAGCTCTGCTGTACATTTTTCCTCAAGGCACTGCGTCCTGCTCAAATGAGGCAAAC
TTGCACCATCCTTTCGGAATCGGAAAGAGATCAATGGCTTGCCTCAATGGTCCATTATCT
TTAAGGACTTCCCCCTCGTTCCCATGATCCCATCGCACTAAGAATTGCAAGATCAACCTC
TTCAAGGGCCCTGGACATTCAAGCCTTCCAAGATGCCCCTGGGCGCTCAAGGTACTACCC
AAAAACATCTACCAGACGCACATGGACCTCA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920360|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_B12.
(571 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9FT57
Definition tr|Q9FT57|Q9FT57_ARATH Putative uncharacterized protein T25B15_20 OS=Arabidopsis thaliana
Align length 84
Score (bit) 35.4
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920360|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_B12.
(571 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9FT57|Q9FT57_ARATH Putative uncharacterized protein T25B15_2... 35 2.3
tr|Q6PED5|Q6PED5_MOUSE Erdr1 protein OS=Mus musculus GN=Erdr1 PE... 34 6.6
tr|Q16Y11|Q16Y11_AEDAE Putative uncharacterized protein OS=Aedes... 33 8.6

>tr|Q9FT57|Q9FT57_ARATH Putative uncharacterized protein T25B15_20
OS=Arabidopsis thaliana GN=T25B15_20 PE=4 SV=1
Length = 1677

Score = 35.4 bits (80), Expect = 2.3
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = -2

Query: 294 NECLFLWSLDIKKLFGL-SILLISGWVMPYI*LNSISHGISSDLGAVRLMAANSGTKFSA 118
++C +S ++K GL SI SG V + +++ + G SDL M +NSG +
Sbjct: 1143 DQCKVFFS-KVRKCLGLESIKFGSGNVSTSVSVDNGNEGGGSDLEDPCPMESNSGIVNNG 1201

Query: 117 CVCCRMGWDRPASPFWLSKTSLNE 46
VC +MG + P SPF +++ +N+
Sbjct: 1202 -VCAKMGMNSPTSPFNMNQDGVNQ 1224


>tr|Q6PED5|Q6PED5_MOUSE Erdr1 protein OS=Mus musculus GN=Erdr1 PE=2
SV=1
Length = 145

Score = 33.9 bits (76), Expect = 6.6
Identities = 25/76 (32%), Positives = 32/76 (42%)
Frame = +1

Query: 64 RKPKR*SRTVPPHPTAHTGTKFCARVCRHQSHSS*VTRYPMRDRVELYIGHDPT*NQQDR 243
RKP + T PPHP HTG R RH H TR+ R + + P Q R
Sbjct: 19 RKP---APTAPPHPPQHTGHTRAPRPPRHTRH----TRH-TRQAGQAHASAGPAPATQTR 70

Query: 244 QSKELLDVQTPKEETL 291
S+ DV P+ +
Sbjct: 71 TSRRGQDVHPPRSRCM 86


>tr|Q16Y11|Q16Y11_AEDAE Putative uncharacterized protein OS=Aedes
aegypti GN=AAEL008709 PE=4 SV=1
Length = 1206

Score = 33.5 bits (75), Expect = 8.6
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1

Query: 319 IFPQGTASCSNEANLHHPFGIGKRSMACLNGPLSLRTSPSF-P*SHRTKNCKINLFKGP 492
+ PQG +C+ +L G RSM L+ PL+L S S +T N +N+ KGP
Sbjct: 570 VTPQGRRACAFFNDLGSRVSRGGRSMGGLSTPLNLNISSSMQEIKPKTINISVNIIKGP 628