BP920362 |
Clone id |
YMU001_000136_C02 |
Library |
YMU01 |
Length |
511 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000136_C02. |
Accession |
BP920362 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1368Contig1 |
Sequence |
TTTTTTTTTTTTTTTTAAAGATGAGACAATTTATTGCTGCAAACTTACAATTCCTAAACA GATGTTTATGAGGACAACATAAGCATAACCGGATCTAAATCTCTACAACACATTTACAAG TAGAAGCCCTAACCGGACCTAGATCTCTACAACACATTTACAAGTAGAAGCCCTCAAAGC TTCTTTATTCTGACCTTGCTTTTCCCTTAATGGAGATTGCATCGACAGATTATCATGTCA AAAATTCTCTACGAGAAATTTGTTTGATTCAGAAAAGGAATTCCATAGCTTCCATCAAAG AATTATGTGGCTAAGCCTTGAACTGTATCTTTCAATTCCACCAAAAAGCTTTGAGTCTCC GAGAGCAACTTTGTTACAGCAGCCTTGTTTTGCTGCACATTGTCGAGAGCTTCTGCTACA ACAGGTAGCCAGTCTTCTTCTGCCTGAGGAAACCTTTCCTTCAGTGCTTGCTTCCTGCAA CGAGCACTCTCGAGCTGCTTCATCAGCTCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5K2P4 |
Definition |
sp|Q5K2P4|K1C13_PROAT Keratin, type I cytoskeletal 13 OS=Protopterus aethiopicus |
Align length |
66 |
Score (bit) |
38.9 |
E-value |
0.013 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920362|Adiantum capillus-veneris mRNA, clone: YMU001_000136_C02. (495 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q5K2P4|K1C13_PROAT Keratin, type I cytoskeletal 13 OS=Protopt... 39 0.013 sp|Q92764|KRT35_HUMAN Keratin, type I cuticular Ha5 OS=Homo sapi... 36 0.11 sp|Q6DE92|PXDC2_XENLA Plexin domain-containing protein 2 OS=Xeno... 34 0.32 sp|Q497I4|KRT35_MOUSE Keratin, type I cuticular Ha5 OS=Mus muscu... 33 0.55 sp|Q14532|K1H2_HUMAN Keratin, type I cuticular Ha2 OS=Homo sapie... 32 1.2 sp|Q9D0M2|CDCA7_MOUSE Cell division cycle-associated protein 7 O... 32 1.2 sp|P51856|K1C19_POTTR Keratin, type I cytoskeletal 19 OS=Potorou... 32 1.6 sp|B0LKP1|KRT35_SHEEP Keratin, type I cuticular Ha5 OS=Ovis arie... 32 2.1 sp|Q0P5J7|KRT35_BOVIN Keratin, type I cuticular Ha5 OS=Bos tauru... 32 2.1 sp|Q4KM91|CDCA7_RAT Cell division cycle-associated protein 7 OS=... 32 2.1 sp|Q4R5E9|SCG2_MACFA Secretogranin-2 OS=Macaca fascicularis GN=S... 31 2.7 sp|P38989|SMC2_YEAST Structural maintenance of chromosomes prote... 31 3.5 sp|O76013|KRT36_HUMAN Keratin, type I cuticular Ha6 OS=Homo sapi... 31 3.5 sp|Q9D646|KRT34_MOUSE Keratin, type I cuticular Ha4 OS=Mus muscu... 31 3.5 sp|P58994|GSH1_BUCAP Glutamate--cysteine ligase OS=Buchnera aphi... 31 3.6 sp|Q61897|KT33B_MOUSE Keratin, type I cuticular Ha3-II OS=Mus mu... 30 4.6 sp|Q62168|K1H2_MOUSE Keratin, type I cuticular Ha2 OS=Mus muscul... 30 4.6 sp|Q8K0Y2|KT33A_MOUSE Keratin, type I cuticular Ha3-I OS=Mus mus... 30 6.0 sp|A1ATJ6|DNLJ_PELPD DNA ligase OS=Pelobacter propionicus (strai... 30 6.0 sp|Q61765|K1H1_MOUSE Keratin, type I cuticular Ha1 OS=Mus muscul... 30 7.9 sp|Q9UJ42|GP160_HUMAN Probable G-protein coupled receptor 160 OS... 30 8.0
>sp|Q5K2P4|K1C13_PROAT Keratin, type I cytoskeletal 13 OS=Protopterus aethiopicus GN=KRT13 PE=1 SV=1 Length = 465
Score = 38.9 bits (89), Expect = 0.013 Identities = 22/66 (33%), Positives = 40/66 (60%) Frame = -3
Query: 493 ELMKQLESARCRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELK 314 +L K+LE R + + L E+ + EDW +A +++ +N A+ T+ + T++ + ELK Sbjct: 265 DLTKKLERMRQQYEQLAEKNRKDAEDWF---MKASEDLNKNVASSTEAIQTTKTEINELK 321
Query: 313 DTVQGL 296 T+QGL Sbjct: 322 RTIQGL 327
>sp|Q92764|KRT35_HUMAN Keratin, type I cuticular Ha5 OS=Homo sapiens GN=KRT35 PE=2 SV=4 Length = 455
Score = 35.8 bits (81), Expect = 0.11 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = -3
Query: 493 ELMKQLESARCRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELK 314 +L + LE RC+ + L E + EDWL +E L+ Q + ++ L Q+ ++EL+ Sbjct: 261 DLNRVLEEMRCQYETLVENNRRDAEDWLDTQSEELN---QQVVSSSEQLQSCQAEIIELR 317
Query: 313 DTVQGL 296 TV L Sbjct: 318 RTVNAL 323
>sp|Q6DE92|PXDC2_XENLA Plexin domain-containing protein 2 OS=Xenopus laevis GN=plxdc2 PE=2 SV=1 Length = 513
Score = 34.3 bits (77), Expect = 0.32 Identities = 18/79 (22%), Positives = 42/79 (53%) Frame = +2
Query: 170 YSDLAFPLMEIASTDYHVKNSLREICLIQKRNSIASIKELCG*ALNCIFQFHQKALSLRE 349 Y D+ P+M+I+ST++ VK L + ++ + I+++ IF++H+ L + + Sbjct: 244 YKDIPVPVMQISSTNHPVKVGLSDAFVV-----VHKIQQIPNVRRRTIFEYHRVELEMTK 298
Query: 350 QLCYSSLVLLHIVESFCYN 406 +S++ +L + +N Sbjct: 299 ITSFSAVEMLPLATCLQFN 317
>sp|Q497I4|KRT35_MOUSE Keratin, type I cuticular Ha5 OS=Mus musculus GN=Krt35 PE=2 SV=1 Length = 455
Score = 33.5 bits (75), Expect = 0.55 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = -3
Query: 493 ELMKQLESARCRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELK 314 +L + L+ RC+ + L E + EDW E L+ Q + ++ L QS ++EL+ Sbjct: 261 DLNRVLDEMRCQYETLVENNRRDAEDWYDTQTEELN---QQVVSSSEQLQSCQSDIIELR 317
Query: 313 DTVQGL 296 TV L Sbjct: 318 RTVNSL 323
>sp|Q14532|K1H2_HUMAN Keratin, type I cuticular Ha2 OS=Homo sapiens GN=KRT32 PE=1 SV=2 Length = 448
Score = 32.3 bits (72), Expect = 1.2 Identities = 20/66 (30%), Positives = 35/66 (53%) Frame = -3
Query: 493 ELMKQLESARCRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELK 314 +L + LE RC+ +A+ E + E+W + E L+ Q A ++ L QS +++L+ Sbjct: 260 DLTRVLEEMRCQYEAMVEANRRDVEEWFNMQMEELN---QQVATSSEQLQNYQSDIIDLR 316
Query: 313 DTVQGL 296 TV L Sbjct: 317 RTVNTL 322
>sp|Q9D0M2|CDCA7_MOUSE Cell division cycle-associated protein 7 OS=Mus musculus GN=Cdca7 PE=1 SV=1 Length = 382
Score = 32.3 bits (72), Expect = 1.2 Identities = 15/39 (38%), Positives = 25/39 (64%) Frame = -3
Query: 445 KERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSF 329 +E + EED + + + N++QNKA + KL+SE +SF Sbjct: 107 EEEEEEEEEDGMNFLEKRALNIKQNKAMLAKLMSELESF 145
>sp|P51856|K1C19_POTTR Keratin, type I cytoskeletal 19 OS=Potorous tridactylus GN=KRT19 PE=2 SV=1 Length = 401
Score = 32.0 bits (71), Expect = 1.6 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = -3
Query: 493 ELMKQLESARCRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELK 314 +L K L R + +A+ E+ E W D + Q A TKLL +++ + +L+ Sbjct: 244 DLAKILTDMRSQYEAMVEKNRSDAEAWF---TSKTDELNQEVAVHTKLLQTSKTEVTDLR 300
Query: 313 DTVQGL 296 T+QGL Sbjct: 301 RTLQGL 306
>sp|B0LKP1|KRT35_SHEEP Keratin, type I cuticular Ha5 OS=Ovis aries GN=KRT35 PE=2 SV=1 Length = 455
Score = 31.6 bits (70), Expect = 2.1 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = -3
Query: 493 ELMKQLESARCRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELK 314 +L + L RC+ + L E + EDW E L+ Q + ++ L Q+ ++EL+ Sbjct: 261 DLNRVLNEMRCQYETLVENNRREAEDWFNTQTEELN---QQVVSSSEQLQSYQAEIIELR 317
Query: 313 DTVQGL 296 TV L Sbjct: 318 RTVNAL 323
>sp|Q0P5J7|KRT35_BOVIN Keratin, type I cuticular Ha5 OS=Bos taurus GN=KRT35 PE=2 SV=2 Length = 454
Score = 31.6 bits (70), Expect = 2.1 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = -3
Query: 493 ELMKQLESARCRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELK 314 +L + L RC+ + L E + EDW E L+ Q + ++ L Q+ ++EL+ Sbjct: 260 DLNRVLNEMRCQYETLVENNRREAEDWFNTQTEELN---QQVVSSSEQLQSYQAEIIELR 316
Query: 313 DTVQGL 296 TV L Sbjct: 317 RTVNAL 322
>sp|Q4KM91|CDCA7_RAT Cell division cycle-associated protein 7 OS=Rattus norvegicus GN=Cdca7 PE=2 SV=1 Length = 377
Score = 31.6 bits (70), Expect = 2.1 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = -3
Query: 430 QAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSF 329 + EED + + + N++QNKA + KL+SE +SF Sbjct: 108 EEEEDGMNFLEKRALNIKQNKAMLAKLMSELESF 141
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4LEK6 |
Definition |
tr|B4LEK6|B4LEK6_DROVI GJ13053 OS=Drosophila virilis |
Align length |
57 |
Score (bit) |
38.9 |
E-value |
0.13 |
Report |
|