BP920380
Clone id YMU001_000136_D10
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCACACACGGGCGAGGTCAATGGTTCCCGGCTACCCGACGTGTACGTAGCCCCTCTCGTG
TAGTGGGAATCTTGAAAAGCTTGGAAGAGCATCTTGAAAAATCAGGAACACAGAGTCAAG
CAAGAGGAGATCTTGAAGCTTGGAGTTAGAGAAAATCTCGAGCCAAGCAGGTCATCGGAG
ATGGGGGAGGCAACCAAGCCAGGGAATCGAACGAGCATCGACAAGAGTAGTAGATTCGAG
TTGGAAGCAATGGGAATCGGGCAATGTGGTGCAATCTAGAAGAAATCAACTCCAACCTCA
GGAAGCAAGCTGAGTAGGAACAAAATAAAACAAAAGATGTTGTAAAAGGTCTGCAGTCAA
GGCAGCCGAATTGCAGACAGAGTTTGCAAAGCTTGAAATAACTCGGGCAGTCGAGAGGAA
ATCCGAGTACAGAGCACGGGAATTGAGAGGAATTGAAGGCTTGCACCGCGTAGAAGCCAG
AGGACCAAGCAGGGACAAAGGAGGGCTGCAACCAGCTGAAAT
■■Homology search results ■■ -
sp_hit_id Q869E1
Definition sp|Q869E1|DNLI1_DICDI DNA ligase 1 OS=Dictyostelium discoideum
Align length 88
Score (bit) 31.6
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920380|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_D10.
(522 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q869E1|DNLI1_DICDI DNA ligase 1 OS=Dictyostelium discoideum G... 32 2.4
sp|Q5VZK9|LR16A_HUMAN Leucine-rich repeat-containing protein 16A... 31 3.1
sp|Q43135|C79A1_SORBI Tyrosine N-monooxygenase OS=Sorghum bicolo... 31 4.0
sp|Q6BLG4|ALB1_DEBHA Ribosome biogenesis protein ALB1 OS=Debaryo... 31 4.1
sp|Q3YZ36|RODZ_SHISS Cytoskeleton protein rodZ OS=Shigella sonne... 30 7.0
sp|Q83QK7|RODZ_SHIFL Cytoskeleton protein rodZ OS=Shigella flexn... 30 7.0
sp|Q0T203|RODZ_SHIF8 Cytoskeleton protein rodZ OS=Shigella flexn... 30 7.0
sp|Q32D46|RODZ_SHIDS Cytoskeleton protein rodZ OS=Shigella dysen... 30 7.0
sp|Q31XX4|RODZ_SHIBS Cytoskeleton protein rodZ OS=Shigella boydi... 30 7.0
sp|B2TXU1|RODZ_SHIB3 Cytoskeleton protein rodZ OS=Shigella boydi... 30 7.0
sp|B1IWE5|RODZ_ECOLC Cytoskeleton protein rodZ OS=Escherichia co... 30 7.0
sp|A8A322|RODZ_ECOHS Cytoskeleton protein rodZ OS=Escherichia co... 30 7.0
sp|B5Z0Y5|RODZ_ECO5E Cytoskeleton protein rodZ OS=Escherichia co... 30 7.0
sp|Q7ABM8|RODZ_ECO57 Cytoskeleton protein rodZ OS=Escherichia co... 30 7.0
sp|A7ZPV9|RODZ_ECO24 Cytoskeleton protein rodZ OS=Escherichia co... 30 7.0
sp|Q9TW67|NGLY1_CAEEL Peptide-N(4)-(N-acetyl-beta-glucosaminyl)a... 30 9.0
sp|Q7TQH0|ATX2L_MOUSE Ataxin-2-like protein OS=Mus musculus GN=A... 30 9.1

>sp|Q869E1|DNLI1_DICDI DNA ligase 1 OS=Dictyostelium discoideum
GN=lig1 PE=3 SV=1
Length = 1192

Score = 31.6 bits (70), Expect = 2.4
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1

Query: 76 KAWKSILKNQEHRVKQEEILKLGVRENLEPSRSSEMGEATKPGNRTSIDKSSRFELEAMG 255
K K + + +E K++E+ + ++E + + E T P T ID S F+
Sbjct: 311 KKEKELKEKEEKEKKEKELKEKELKEKELKEKELKEKELTSPKKET-IDISDLFK----- 364

Query: 256 IGQCGAI*KKSTPTSGSKLSRNKIKQKM 339
+ A K S PTS SK S+ KQK+
Sbjct: 365 --RANAEAKSSVPTSTSKNSKTNKKQKV 390


>sp|Q5VZK9|LR16A_HUMAN Leucine-rich repeat-containing protein 16A
OS=Homo sapiens GN=LRRC16A PE=1 SV=1
Length = 1371

Score = 31.2 bits (69), Expect = 3.1
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +1

Query: 97 KNQEHRVKQEEILKLGVRENLEPSRSSEMGEATKPGNRTSIDKSSRFELEAMGIG---QC 267
K EH E I ++ ++ E S+ E+G+ + +++S R+ ++ MG G +
Sbjct: 1112 KAAEHNGNSERIEEIKTPDSFEESQGEEIGKVERSDSKSSPQAGRRYGVQVMGSGLLAEM 1171

Query: 268 GAI*KKSTPTSGSKLSRNKIKQ 333
A +K + KL + + Q
Sbjct: 1172 KAKQEKRAACAQKKLGNDAVSQ 1193


>sp|Q43135|C79A1_SORBI Tyrosine N-monooxygenase OS=Sorghum bicolor
GN=CYP79A1 PE=1 SV=3
Length = 558

Score = 30.8 bits (68), Expect = 4.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2

Query: 170 GHRRWGRQPSQGIERASTRVVDSSWKQWESG 262
GH + ++ + + R V+D W+QW+SG
Sbjct: 282 GHEKIVKEANVAVNRLHDTVIDDRWRQWKSG 312


>sp|Q6BLG4|ALB1_DEBHA Ribosome biogenesis protein ALB1
OS=Debaryomyces hansenii GN=ALB1 PE=3 SV=1
Length = 168

Score = 30.8 bits (68), Expect = 4.1
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1

Query: 76 KAWKSILKNQEHRVKQEEILKLGV---RENLEPSRSSEMGEATKPGNRTSIDK 225
K K I +N+++ K+ E L + + +E +E +E E TK N+T +DK
Sbjct: 81 KRSKKIARNKKYIAKRNEKLNIDLLADQEQMEVDEETEKEEQTKAKNQTKLDK 133


>sp|Q3YZ36|RODZ_SHISS Cytoskeleton protein rodZ OS=Shigella sonnei
(strain Ss046) GN=rodZ PE=3 SV=1
Length = 337

Score = 30.0 bits (66), Expect = 7.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1

Query: 103 QEHRVKQEEILKLGVRENLEPSRSSEMGEATKPGNRTSIDKSS 231
Q+H+ +QEEI + + + E S +SE G++ T+ D ++
Sbjct: 134 QDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176


>sp|Q83QK7|RODZ_SHIFL Cytoskeleton protein rodZ OS=Shigella flexneri
GN=rodZ PE=3 SV=1
Length = 337

Score = 30.0 bits (66), Expect = 7.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1

Query: 103 QEHRVKQEEILKLGVRENLEPSRSSEMGEATKPGNRTSIDKSS 231
Q+H+ +QEEI + + + E S +SE G++ T+ D ++
Sbjct: 134 QDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176


>sp|Q0T203|RODZ_SHIF8 Cytoskeleton protein rodZ OS=Shigella flexneri
serotype 5b (strain 8401) GN=rodZ PE=3 SV=1
Length = 337

Score = 30.0 bits (66), Expect = 7.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1

Query: 103 QEHRVKQEEILKLGVRENLEPSRSSEMGEATKPGNRTSIDKSS 231
Q+H+ +QEEI + + + E S +SE G++ T+ D ++
Sbjct: 134 QDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176


>sp|Q32D46|RODZ_SHIDS Cytoskeleton protein rodZ OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=rodZ PE=3 SV=1
Length = 337

Score = 30.0 bits (66), Expect = 7.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1

Query: 103 QEHRVKQEEILKLGVRENLEPSRSSEMGEATKPGNRTSIDKSS 231
Q+H+ +QEEI + + + E S +SE G++ T+ D ++
Sbjct: 134 QDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176


>sp|Q31XX4|RODZ_SHIBS Cytoskeleton protein rodZ OS=Shigella boydii
serotype 4 (strain Sb227) GN=rodZ PE=3 SV=1
Length = 337

Score = 30.0 bits (66), Expect = 7.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1

Query: 103 QEHRVKQEEILKLGVRENLEPSRSSEMGEATKPGNRTSIDKSS 231
Q+H+ +QEEI + + + E S +SE G++ T+ D ++
Sbjct: 134 QDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176


>sp|B2TXU1|RODZ_SHIB3 Cytoskeleton protein rodZ OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=rodZ PE=3
SV=1
Length = 337

Score = 30.0 bits (66), Expect = 7.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1

Query: 103 QEHRVKQEEILKLGVRENLEPSRSSEMGEATKPGNRTSIDKSS 231
Q+H+ +QEEI + + + E S +SE G++ T+ D ++
Sbjct: 134 QDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176


tr_hit_id B6KC14
Definition tr|B6KC14|B6KC14_TOXGO PX domain-containing protein OS=Toxoplasma gondii ME49
Align length 84
Score (bit) 35.0
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920380|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_D10.
(522 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6KC14|B6KC14_TOXGO PX domain-containing protein OS=Toxoplasm... 35 2.2
tr|Q7V0H8|Q7V0H8_PROMP Putative uncharacterized protein OS=Proch... 35 2.3
tr|B7SVN5|B7SVN5_9ABAC ME53 OS=Spodoptera litura nucleopolyhedro... 33 6.5
tr|Q10ZT2|Q10ZT2_TRIEI Putative uncharacterized protein OS=Trich... 33 6.5
tr|A2BXY6|A2BXY6_PROM5 Putative uncharacterized protein OS=Proch... 33 6.6
tr|A7S1K5|A7S1K5_NEMVE Predicted protein OS=Nematostella vectens... 33 8.5
tr|A2EZL5|A2EZL5_TRIVA Putative uncharacterized protein OS=Trich... 33 8.5

>tr|B6KC14|B6KC14_TOXGO PX domain-containing protein OS=Toxoplasma
gondii ME49 GN=TGME49_062460 PE=4 SV=1
Length = 2435

Score = 35.0 bits (79), Expect = 2.2
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = +3

Query: 57 RVVGILKSLEEH----LEKSGTQSQARGDLEA----WS*RKSRAKQVIGDGGGNQARESN 212
RV G L +LE+ +E+SG Q + G+ E WS ++ ++V GDG G + R+
Sbjct: 1596 RVTGRLPNLEDRQAHAVEESGRQRREEGNHEEKREHWSGERAATERVNGDGEGREGRQRP 1655

Query: 213 EHRQE**IRVGSNGNRAMWCNLEE 284
+ + VG W +E
Sbjct: 1656 SEAEASRMSVGDTWGDHEWARRDE 1679


>tr|Q7V0H8|Q7V0H8_PROMP Putative uncharacterized protein
OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1378 / MED4) GN=PMM1279 PE=3 SV=1
Length = 148

Score = 35.0 bits (79), Expect = 2.3
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1

Query: 55 LV*WES*KAWKSILKNQEHRVKQ--EEILKLGVRENLEPSRSSEMGEATKPG 204
LV WE+ K WKSI N+ + V++ EE +K + N+ P GE K G
Sbjct: 97 LVNWENKKLWKSISMNEVNEVQEKFEENVKTSLNTNVNPFELIYEGELVKQG 148


>tr|B7SVN5|B7SVN5_9ABAC ME53 OS=Spodoptera litura
nucleopolyhedrovirus II PE=4 SV=1
Length = 376

Score = 33.5 bits (75), Expect = 6.5
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
Frame = -3

Query: 475 FYAVQAFNSSQFPCSVLGFPLDCPSYFKLCKLCLQFGCLDCRPFTTSFVLFCSY------ 314
FY V F V+ FP+ C + KLCK D T VL+CS
Sbjct: 262 FYTVTKRVYYSFFDYVVHFPIKCTRFCKLCKE-------DKLYLKTHPVLYCSKCGFTDA 314

Query: 313 ----SACFLRLELISSRLHHIARFPLLPTRIYYSCRCSFDSLAWLPPPS 179
+A FL+ + ++ + L PTRIYY + S PPPS
Sbjct: 315 AFFKNAPFLKTTVFLAKC--VKAKTLSPTRIYYYDMNEYKSYINKPPPS 361


>tr|Q10ZT2|Q10ZT2_TRIEI Putative uncharacterized protein
OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_3109
PE=4 SV=1
Length = 210

Score = 33.5 bits (75), Expect = 6.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3

Query: 267 WCNLEEINSNLRKQAE*EQNKTKDVVKGLQSRQP 368
WC L + NSNL+K + Q +T D++ L S +P
Sbjct: 95 WCLLNKTNSNLKKANDLYQTQTMDIIYALASAKP 128


>tr|A2BXY6|A2BXY6_PROM5 Putative uncharacterized protein
OS=Prochlorococcus marinus (strain MIT 9515)
GN=P9515_14401 PE=4 SV=1
Length = 148

Score = 33.5 bits (75), Expect = 6.6
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1

Query: 55 LV*WES*KAWKSILKNQEHRVKQ--EEILKLGVRENLEPSRSSEMGEATKPG 204
LV WE+ K WKSI N+ + +++ EE +K + N P + GE K G
Sbjct: 97 LVNWENKKLWKSISMNEVNEIQEKFEENVKTSLNINFNPFQLIYEGELIKQG 148


>tr|A7S1K5|A7S1K5_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g165341 PE=4 SV=1
Length = 670

Score = 33.1 bits (74), Expect = 8.5
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +2

Query: 347 RSAVKAAELQTEFAKLEITRAVERKSEYRARELRGIEGLHRVEARGPSRDK 499
RSA+ +A+ Q E A+ E+ R E +S A EL IE HRV+ R+K
Sbjct: 26 RSALSSAKSQYEQARDELQRVKESESHLCA-ELESIESAHRVQVERLEREK 75


>tr|A2EZL5|A2EZL5_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_068900 PE=4 SV=1
Length = 118

Score = 33.1 bits (74), Expect = 8.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3

Query: 484 SSGFYAVQAFNSSQFPCSVLGFPLDCPSYFKLCKLCLQFGCLDC 353
S+GF+ QAF S +PCS LG + L LC G + C
Sbjct: 14 SNGFFKDQAFESDLYPCSGLG--------YSLLDLCCYHGAVGC 49