| BP920383 |
| Clone id |
YMU001_000136_E01 |
| Library |
YMU01 |
| Length |
396 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000136_E01. |
| Accession |
BP920383 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1020Contig1 |
| Sequence |
TGAATTCAGTCAAGACTGGGTAAATATTCTCAAAAGGCATCGATAAATTTCATCCCTGAT
CTGGATCACGATTCCAGACCAAATATACTTTTAAAACAGCAATCCAAATGATGCACTTGC
CTTTTTTTTTCCTCCCATGCCTACAAGTTTATACCTTGGCACCAGTGAGGACTATCTTCC
CAGACACAAAAATGAGCAGCACTATTTTCGGCTGCTTCATCCGATAAATGAGCCCAGGGA
ACAACTCTGGCTCATAACTTGCAGAAATGCCCATGGGCATAAGCCAAACCTTCTAACCTT
ATGGGAAATTTTACATCACAAGATCCAACAATATTTTGAATTTTAAAGTCCTTAAATTGG
GCCGGAAAGCCAAGTTTCTGAATAATACGTGCATAC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P26357 |
| Definition |
sp|P26357|TBP_SOLTU TATA-box-binding protein OS=Solanum tuberosum |
| Align length |
44 |
| Score (bit) |
89.7 |
| E-value |
3.0e-35 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920383|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_E01.
(396 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P26357|TBP_SOLTU TATA-box-binding protein OS=Solanum tuberosu... 90 3e-35
sp|Q8W0W4|TBP2_ORYSJ TATA-binding protein 2 OS=Oryza sativa subs... 89 4e-35
sp|Q42808|TBP_SOYBN TATA-box-binding protein OS=Glycine max GN=T... 89 4e-35
sp|P48511|TBP_MESCR TATA-box-binding protein OS=Mesembryanthemum... 89 1e-34
sp|P50159|TBP2_MAIZE TATA-box-binding protein 2 OS=Zea mays GN=T... 89 4e-34
sp|P93348|TBP_TOBAC TATA-box-binding protein OS=Nicotiana tabacu... 86 4e-34
sp|P50158|TBP1_MAIZE TATA-box-binding protein 1 OS=Zea mays GN=T... 89 5e-34
sp|P26356|TBP1_WHEAT TATA-box-binding protein 1 OS=Triticum aest... 85 6e-34
sp|Q02879|TBP2_WHEAT TATA-box-binding protein 2 OS=Triticum aest... 86 1e-33
sp|P26354|TBP_ACACA TATA-box-binding protein OS=Acanthamoeba cas... 86 3e-32
sp|P28147|TBP1_ARATH TATA-box-binding protein 1 OS=Arabidopsis t... 86 4e-32
sp|P28148|TBP2_ARATH TATA-box-binding protein 2 OS=Arabidopsis t... 86 2e-31
sp|P17871|TBP_SCHPO TATA-box-binding protein OS=Schizosaccharomy... 83 1e-30
sp|P13393|TBP_YEAST TATA-box-binding protein OS=Saccharomyces ce... 81 5e-30
sp|P46272|TBP_ACECL TATA-box-binding protein OS=Acetabularia cli... 80 7e-30
sp|Q12731|TBP_EMENI TATA-box-binding protein OS=Emericella nidul... 76 1e-28
sp|P20227|TBP_DROME TATA-box-binding protein OS=Drosophila melan... 77 2e-28
sp|P91809|TBP_STRPU TATA-box-binding protein OS=Strongylocentrot... 77 3e-28
sp|A6H907|TBPL2_PANTR TATA box-binding protein-like protein 2 OS... 77 4e-28
sp|P20226|TBP_HUMAN TATA-box-binding protein OS=Homo sapiens GN=... 77 4e-28
sp|Q4R4F5|TBP_MACFA TATA-box-binding protein OS=Macaca fascicula... 77 4e-28
sp|Q2HJ52|TBP_BOVIN TATA-box-binding protein OS=Bos taurus GN=TB... 77 4e-28
sp|P29037|TBP_MOUSE TATA-box-binding protein OS=Mus musculus GN=... 77 4e-28
sp|P53360|TBP_MESAU TATA-box-binding protein OS=Mesocricetus aur... 77 4e-28
sp|Q92146|TBP_TRIGA TATA-box-binding protein OS=Trimeresurus gra... 77 4e-28
sp|Q7SXL3|TBP_DANRE TATA-box-binding protein OS=Danio rerio GN=t... 77 4e-28
sp|O13270|TBP_CHICK TATA-box-binding protein OS=Gallus gallus GN... 77 4e-28
sp|Q92117|TBP_TRIFL TATA-box-binding protein OS=Trimeresurus fla... 77 4e-28
sp|Q28GG8|TBP_XENTR TATA-box-binding protein OS=Xenopus tropical... 77 4e-28
sp|P27633|TBP_XENLA TATA-box-binding protein OS=Xenopus laevis G... 77 4e-28
>sp|P26357|TBP_SOLTU TATA-box-binding protein OS=Solanum tuberosum
GN=TBP PE=2 SV=1
Length = 200
Score = 89.7 bits (221), Expect(2) = 3e-35
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAYAHG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYAHGAF 140
Score = 78.6 bits (192), Expect(2) = 3e-35
Identities = 49/90 (54%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 178 -------RD-----ETYTAFENIYPVLTEF 195
Score = 43.1 bits (100), Expect = 4e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>sp|Q8W0W4|TBP2_ORYSJ TATA-binding protein 2 OS=Oryza sativa subsp.
japonica GN=TBP2 PE=1 SV=2
Length = 203
Score = 88.6 bits (218), Expect(2) = 4e-35
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 100 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 143
Score = 79.3 bits (194), Expect(2) = 4e-35
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 141 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 180
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 181 -------RD-----ETYTAFENIYPVLTEF 198
Score = 43.1 bits (100), Expect = 4e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 52 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 88
>sp|Q42808|TBP_SOYBN TATA-box-binding protein OS=Glycine max GN=TBP1
PE=2 SV=1
Length = 200
Score = 88.6 bits (218), Expect(2) = 4e-35
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Score = 79.3 bits (194), Expect(2) = 4e-35
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 178 -------RD-----ETYTAFENIYPVLTEF 195
Score = 42.4 bits (98), Expect = 7e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R++ PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTGAK 85
>sp|P48511|TBP_MESCR TATA-box-binding protein OS=Mesembryanthemum
crystallinum PE=2 SV=1
Length = 200
Score = 88.6 bits (218), Expect(2) = 1e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Score = 77.8 bits (190), Expect(2) = 1e-34
Identities = 49/90 (54%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
R+ FENIYPVLTEF
Sbjct: 178 -------RE-----ETYTAFENIYPVLTEF 195
Score = 43.1 bits (100), Expect = 4e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>sp|P50159|TBP2_MAIZE TATA-box-binding protein 2 OS=Zea mays GN=TBP2
PE=2 SV=1
Length = 200
Score = 88.6 bits (218), Expect(2) = 4e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Score = 76.3 bits (186), Expect(2) = 4e-34
Identities = 48/90 (53%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
R+ FENIYPVL+EF
Sbjct: 178 -------RE-----ETYTAFENIYPVLSEF 195
Score = 43.1 bits (100), Expect = 4e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>sp|P93348|TBP_TOBAC TATA-box-binding protein OS=Nicotiana tabacum
PE=2 SV=1
Length = 200
Score = 85.5 bits (210), Expect(2) = 4e-34
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGF A+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFDAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Score = 79.3 bits (194), Expect(2) = 4e-34
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 178 -------RD-----ETYTAFENIYPVLTEF 195
Score = 43.1 bits (100), Expect = 4e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>sp|P50158|TBP1_MAIZE TATA-box-binding protein 1 OS=Zea mays GN=TBP1
PE=2 SV=1
Length = 200
Score = 88.6 bits (218), Expect(2) = 5e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Score = 75.9 bits (185), Expect(2) = 5e-34
Identities = 48/90 (53%), Positives = 50/90 (55%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
R+ FENIYPVL EF
Sbjct: 178 -------RE-----ETYTAFENIYPVLAEF 195
Score = 43.1 bits (100), Expect = 4e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>sp|P26356|TBP1_WHEAT TATA-box-binding protein 1 OS=Triticum
aestivum GN=TBP1 PE=2 SV=1
Length = 233
Score = 85.1 bits (209), Expect(2) = 6e-34
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARI+QKLGFPA FKDFKIQNIV SCDVKFPIRLEGLAY+HG F
Sbjct: 130 YARIVQKLGFPATFKDFKIQNIVASCDVKFPIRLEGLAYSHGAF 173
Score = 79.0 bits (193), Expect(2) = 6e-34
Identities = 48/90 (53%), Positives = 52/90 (57%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLL+FVSGKIVLTGAKV
Sbjct: 171 GAFSSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLTGAKV-------------------- 210
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD + FENIYPVLTE+
Sbjct: 211 -------RD-----EIYAAFENIYPVLTEY 228
Score = 42.4 bits (98), Expect = 7e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R++ PK LIF SGK+V TGAK
Sbjct: 82 NAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTGAK 118
>sp|Q02879|TBP2_WHEAT TATA-box-binding protein 2 OS=Triticum
aestivum GN=TBP2 PE=2 SV=1
Length = 201
Score = 86.3 bits (212), Expect(2) = 1e-33
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIV SCDVKFPIRLEGLAY+HG F
Sbjct: 98 YARIIQKLGFPAKFKDFKIQNIVASCDVKFPIRLEGLAYSHGAF 141
Score = 77.0 bits (188), Expect(2) = 1e-33
Identities = 48/90 (53%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRM+QPKIVLLIFVSGKIVLTGAKV
Sbjct: 139 GAFSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKV-------------------- 178
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
R+ FENIYPVLTEF
Sbjct: 179 -------REETYS-----AFENIYPVLTEF 196
Score = 43.1 bits (100), Expect = 4e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 50 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 86
>sp|P26354|TBP_ACACA TATA-box-binding protein OS=Acanthamoeba
castellanii GN=TFIID PE=2 SV=1
Length = 258
Score = 85.5 bits (210), Expect(2) = 3e-32
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHFCKL*ARVVP 237
YARIIQKLGF A+F DFKIQNIVGSCDV+FPIRLEGLA+AH H+C + P
Sbjct: 157 YARIIQKLGFAAKFLDFKIQNIVGSCDVRFPIRLEGLAFAHNHYCSYEPELFP 209
Score = 73.2 bits (178), Expect(2) = 3e-32
Identities = 46/86 (53%), Positives = 49/86 (56%)
Frame = -3
Query: 259 SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVLKVYL 80
SYEPELFPGLIYRM QPKIVLLIFVSGKIVLTGAKV
Sbjct: 202 SYEPELFPGLIYRMVQPKIVLLIFVSGKIVLTGAKV------------------------ 237
Query: 79 VWNRDPDQG*NLSMPFENIYPVLTEF 2
R+ + FENIYPVLTE+
Sbjct: 238 ---RE-----EIYEAFENIYPVLTEY 255
Score = 43.1 bits (100), Expect = 4e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 109 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 145
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9RJY7 |
| Definition |
tr|A9RJY7|A9RJY7_PHYPA TATA-box-binding protein OS=Physcomitrella patens subsp. patens |
| Align length |
44 |
| Score (bit) |
95.1 |
| E-value |
5.0e-36 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920383|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_E01.
(396 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9RJY7|A9RJY7_PHYPA TATA-box-binding protein OS=Physcomitrell... 95 5e-36
tr|A3AL10|A3AL10_ORYSJ TATA-box-binding protein OS=Oryza sativa ... 89 5e-34
tr|A7P0B8|A7P0B8_VITVI TATA-box-binding protein OS=Vitis vinifer... 89 5e-34
tr|Q10FT1|Q10FT1_ORYSJ TATA-box-binding protein OS=Oryza sativa ... 89 5e-34
tr|Q9ZTX5|Q9ZTX5_PHAVU TATA-box-binding protein OS=Phaseolus vul... 89 5e-34
tr|Q9SAU1|Q9SAU1_PHAVU TATA-box-binding protein OS=Phaseolus vul... 89 5e-34
tr|B7FMY1|B7FMY1_MEDTR Putative uncharacterized protein OS=Medic... 89 5e-34
tr|B8ANK6|B8ANK6_ORYSI Putative uncharacterized protein OS=Oryza... 89 5e-34
tr|B7FMV6|B7FMV6_MEDTR Putative uncharacterized protein OS=Medic... 88 6e-34
tr|Q6JAE2|Q6JAE2_MAIZE TATA-box-binding protein OS=Zea mays GN=Z... 89 4e-33
tr|B6SGQ4|B6SGQ4_MAIZE TATA-binding protein 2 OS=Zea mays PE=2 SV=1 89 4e-33
tr|Q6JAD5|Q6JAD5_MAIZE TATA-box-binding protein OS=Zea mays GN=Z... 89 5e-33
tr|B8BH04|B8BH04_ORYSI Putative uncharacterized protein OS=Oryza... 88 1e-32
tr|Q337X1|Q337X1_ORYSJ TATA-box-binding protein OS=Oryza sativa ... 88 1e-32
tr|A3C506|A3C506_ORYSJ TATA-box-binding protein OS=Oryza sativa ... 88 1e-32
tr|Q8W0R2|Q8W0R2_SORBI TATA-binding protein OS=Sorghum bicolor G... 89 2e-32
tr|Q53YT8|Q53YT8_ARATH TATA-box-binding protein (Fragment) OS=Ar... 86 4e-31
tr|Q5S251|Q5S251_VOLCA TATA-box-binding protein OS=Volvox carter... 84 1e-30
tr|A8IJX8|A8IJX8_CHLRE TATA-box-binding protein OS=Chlamydomonas... 84 1e-30
tr|Q2V3W4|Q2V3W4_ARATH TATA-box-binding protein OS=Arabidopsis t... 86 1e-30
tr|Q53YT7|Q53YT7_ARATH TATA-box-binding protein (Fragment) OS=Ar... 86 2e-30
tr|Q12652|Q12652_9ASCO TATA-box-binding protein OS=Pneumocystis ... 83 8e-30
tr|Q12651|Q12651_PNECA TATA-box-binding protein OS=Pneumocystis ... 83 8e-30
tr|B6JVK7|B6JVK7_SCHJP TATA-box-binding protein OS=Schizosacchar... 83 8e-30
tr|Q52UM5|Q52UM5_HYDEC TATA-box-binding protein OS=Hydractinia e... 84 1e-29
tr|A3GFP3|A3GFP3_PICST TATA-box-binding protein OS=Pichia stipit... 81 2e-29
tr|A8NHA9|A8NHA9_COPC7 TATA-box-binding protein OS=Coprinopsis c... 82 3e-29
tr|B0D3E0|B0D3E0_LACBS TATA-box-binding protein (Fragment) OS=La... 82 3e-29
tr|Q2A742|Q2A742_USTHO TATA-box-binding protein OS=Ustilago hord... 79 4e-29
tr|Q4PBW9|Q4PBW9_USTMA TATA-box-binding protein OS=Ustilago mayd... 79 4e-29
>tr|A9RJY7|A9RJY7_PHYPA TATA-box-binding protein OS=Physcomitrella
patens subsp. patens GN=GTF1502.2 PE=3 SV=1
Length = 214
Score = 95.1 bits (235), Expect(2) = 5e-36
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF
Sbjct: 97 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 140
Score = 79.3 bits (194), Expect(2) = 5e-36
Identities = 50/90 (55%), Positives = 52/90 (57%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GHFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD + FENIYPVLTEF
Sbjct: 178 -------RD-----EIYEAFENIYPVLTEF 195
Score = 43.1 bits (100), Expect = 0.007
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>tr|A3AL10|A3AL10_ORYSJ TATA-box-binding protein OS=Oryza sativa
subsp. japonica GN=OsJ_011482 PE=3 SV=1
Length = 228
Score = 88.6 bits (218), Expect(2) = 5e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 115 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 158
Score = 79.3 bits (194), Expect(2) = 5e-34
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 156 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 195
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 196 -------RD-----ETYTAFENIYPVLTEF 213
Score = 36.2 bits (82), Expect = 0.83
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -3
Query: 241 FPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
F +I R+++PK LIF SGK+V TGAK
Sbjct: 75 FAAVIMRIREPKTTALIFASGKMVCTGAK 103
>tr|A7P0B8|A7P0B8_VITVI TATA-box-binding protein OS=Vitis vinifera
GN=GSVIVT00024845001 PE=3 SV=1
Length = 211
Score = 88.6 bits (218), Expect(2) = 5e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Score = 79.3 bits (194), Expect(2) = 5e-34
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 178 -------RD-----ETYTAFENIYPVLTEF 195
Score = 42.4 bits (98), Expect = 0.012
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R++ PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTGAK 85
>tr|Q10FT1|Q10FT1_ORYSJ TATA-box-binding protein OS=Oryza sativa
subsp. japonica GN=Os03g0657000 PE=2 SV=1
Length = 203
Score = 88.6 bits (218), Expect(2) = 5e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 100 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 143
Score = 79.3 bits (194), Expect(2) = 5e-34
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 141 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 180
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 181 -------RD-----ETYTAFENIYPVLTEF 198
Score = 43.1 bits (100), Expect = 0.007
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 52 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 88
>tr|Q9ZTX5|Q9ZTX5_PHAVU TATA-box-binding protein OS=Phaseolus
vulgaris GN=PVTBP1 PE=2 SV=1
Length = 200
Score = 88.6 bits (218), Expect(2) = 5e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Score = 79.3 bits (194), Expect(2) = 5e-34
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 178 -------RD-----ETYTAFENIYPVLTEF 195
Score = 43.1 bits (100), Expect = 0.007
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>tr|Q9SAU1|Q9SAU1_PHAVU TATA-box-binding protein OS=Phaseolus
vulgaris GN=PVTBP2 PE=2 SV=1
Length = 200
Score = 88.6 bits (218), Expect(2) = 5e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Score = 79.3 bits (194), Expect(2) = 5e-34
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 178 -------RD-----ETYTAFENIYPVLTEF 195
Score = 43.1 bits (100), Expect = 0.007
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>tr|B7FMY1|B7FMY1_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 200
Score = 88.6 bits (218), Expect(2) = 5e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Score = 79.3 bits (194), Expect(2) = 5e-34
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 178 -------RD-----ETYTAFENIYPVLTEF 195
Score = 43.1 bits (100), Expect = 0.007
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>tr|B8ANK6|B8ANK6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_12863 PE=4 SV=1
Length = 190
Score = 88.6 bits (218), Expect(2) = 5e-34
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 83 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 126
Score = 79.3 bits (194), Expect(2) = 5e-34
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 124 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 163
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 164 -------RD-----ETYTAFENIYPVLTEF 181
Score = 43.1 bits (100), Expect = 0.007
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 35 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 71
>tr|B7FMV6|B7FMV6_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 200
Score = 88.2 bits (217), Expect(2) = 6e-34
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQN+VGSCDVKFPIRLEGLAY+HG F
Sbjct: 97 YARIIQKLGFPAKFKDFKIQNVVGSCDVKFPIRLEGLAYSHGTF 140
Score = 79.3 bits (194), Expect(2) = 6e-34
Identities = 50/90 (55%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 138 GTFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 177
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
RD FENIYPVLTEF
Sbjct: 178 -------RD-----ETYTAFENIYPVLTEF 195
Score = 43.1 bits (100), Expect = 0.007
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 49 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
>tr|Q6JAE2|Q6JAE2_MAIZE TATA-box-binding protein OS=Zea mays
GN=Z174J15.10 PE=3 SV=1
Length = 392
Score = 88.6 bits (218), Expect(2) = 4e-33
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 395 YARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 264
YARIIQKLGFPA+FKDFKIQNIVGSCDVKFPIRLEGLAY+HG F
Sbjct: 244 YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 287
Score = 76.3 bits (186), Expect(2) = 4e-33
Identities = 48/90 (53%), Positives = 51/90 (56%)
Frame = -3
Query: 271 GISASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV*TCRHGRKKKGKCIIWIAVL 92
G +SYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
Sbjct: 285 GAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV-------------------- 324
Query: 91 KVYLVWNRDPDQG*NLSMPFENIYPVLTEF 2
R+ FENIYPVL+EF
Sbjct: 325 -------RE-----ETYTAFENIYPVLSEF 342
Score = 43.1 bits (100), Expect = 0.007
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 265 SASYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 155
+A Y P+ F +I R+++PK LIF SGK+V TGAK
Sbjct: 196 NAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 232
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