BP920391
Clone id YMU001_000136_E09
Library
Length 552
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAAAACTCGAAGAGCACACGACACTTCAATCACTAGGCGCCAAGAAAGACATTTTTGTTG
TTCTTTAACAACAATACTTAAAATATACCTGTAAAACAACTTGTTTGATTGCCTGAAATG
AGAAACTATGCTAGCTGGCTGTGTTTTGTCCGAAGGCATTGAGAAGAGAAGACGTTCTGA
TATGGCAAACATGGTGATAGCAACAAAATTACTTCGTGTTTATCTTTTTCAAATTCGGAG
ATGAATATAACATTGCCAACTGCTCATACCCAACCAAGCCAAACAGATGCGATCCACCAA
GAAAAACACTCCTTTCCACTTAAACAGGTGCCTTGAAGACACATAGGCTACCTGGTCACT
TGACTTGATCAAAGCTCCACTTACATTTGTTGTGTTGCTCGAATTATACCAAAACCTCTG
TGAATGAAGATAGCTGGACATGCCACTCTTCAGTGTAACGATAGCTAGTGGAGTACATCA
CAAGCACTCACAGAGCTATTCAATATTCATGGCTAGTTTCTGCTTTTTGTAAAACTGCAG
AATCAAGACTTC
■■Homology search results ■■ -
sp_hit_id Q5SZL2
Definition sp|Q5SZL2|CF204_HUMAN Coiled-coil domain-containing protein C6orf204 OS=Homo sapiens
Align length 32
Score (bit) 31.6
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920391|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_E09.
(552 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5SZL2|CF204_HUMAN Coiled-coil domain-containing protein C6or... 32 2.7

>sp|Q5SZL2|CF204_HUMAN Coiled-coil domain-containing protein
C6orf204 OS=Homo sapiens GN=C6orf204 PE=2 SV=1
Length = 805

Score = 31.6 bits (70), Expect = 2.7
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1

Query: 196 DSNKITSCLSFSNSEMNITLPTAHTQPSQTDA 291
D + + LSF S+ ITLPTAH PS + A
Sbjct: 78 DHSTSSGTLSFKPSQSLITLPTAHVMPSNSSA 109


tr_hit_id B2AV32
Definition tr|B2AV32|B2AV32_PODAN Predicted CDS Pa_7_4260 OS=Podospora anserina
Align length 44
Score (bit) 35.0
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920391|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_E09.
(552 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2AV32|B2AV32_PODAN Predicted CDS Pa_7_4260 OS=Podospora anse... 35 2.7
tr|B6JXQ8|B6JXQ8_SCHJP Allantoate permease OS=Schizosaccharomyce... 35 3.5
tr|B3LCJ2|B3LCJ2_PLAKH Putative uncharacterized protein OS=Plasm... 34 5.9

>tr|B2AV32|B2AV32_PODAN Predicted CDS Pa_7_4260 OS=Podospora
anserina PE=4 SV=1
Length = 499

Score = 35.0 bits (79), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1

Query: 387 NVSGALIKSSDQVAYVSSRHLFKWKGVFFLVDRICLAWLGMSSW 256
+++ + + Q AYVS F+W V FL +R + WLG++ W
Sbjct: 205 DINNTIANTHPQAAYVSIAGFFRWFHVLFLSNRF-ITWLGVTPW 247


>tr|B6JXQ8|B6JXQ8_SCHJP Allantoate permease OS=Schizosaccharomyces
japonicus yFS275 GN=SJAG_05182 PE=4 SV=1
Length = 490

Score = 34.7 bits (78), Expect = 3.5
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = -1

Query: 411 WYNSSNTTNVSGALIKSSDQVAYVSSRHLFKWKGVFFLVDRICLAWLGM 265
WY+ + + G ++ S + ++ + H+ WK +F ++ + LAW G+
Sbjct: 205 WYSFNGVATIIGGIL--SYGIGHIHNSHVSTWKFIFIIIGGLSLAWAGI 251


>tr|B3LCJ2|B3LCJ2_PLAKH Putative uncharacterized protein OS=Plasmodium
knowlesi (strain H) GN=PKH_143690 PE=4 SV=1
Length = 2753

Score = 33.9 bits (76), Expect = 5.9
Identities = 19/81 (23%), Positives = 38/81 (46%)
Frame = -3

Query: 514 SHEY*IAL*VLVMYSTSYRYTEEWHVQLSSFTEVLV*FEQHNKCKWSFDQVK*PGSLCVF 335
+H++ I + + + SY YT W +++S +++ + KC + + +F
Sbjct: 1965 NHQFNIVFNLKMYKNVSYHYTLPWAYKINSILKIIHMKQMFQKCTNNSENT-------IF 2017

Query: 334 KAPV*VERSVFLGGSHLFGLV 272
PV +F+GGSH L+
Sbjct: 2018 NIPVFGSIQIFVGGSHTILLI 2038