BP920394
Clone id YMU001_000136_E12
Library
Length 553
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAGGTGACGGTAGGAGCAAGGAGGATCAAGAAGAAGAAAGAGAAGAAGAAGCCATGGCTG
CCGTCTCTGCTTCTACTCTCTTCGCCTCGGTGGCGGCAACTGCCCCCGCTGCTTCTCTGA
AGTCGGAATTCTCTGGCGTTCAGGTGCATGATCAGGAGTCAGCGTTGGTTAGTCGCCCTG
TAATTGATGACTCCAAAGATGCCCAAGAAGATGAGGTTGCTTCTAGCAAGGAAGGGTCGA
GTGTGACTGCCCCGAAGGATGATTGCAGCACAAACTTGTCAAGAAGCTCTGAAGCAGAAC
CATATGGTTCATTAGCACAAGAGGAGCTTTTACCAGCATTGTGTTTTTTGCCAGGTTGGT
CTCATGTGTGGCAGGCTTTCTTAAGCACAAACATTCAAACTGATTCATCAGCGGAGATTA
CCTTGCAAGCATGTTCAGTGTGTGAGGAGGGAGTCTCCGCAATTCTGGATTGGGGCTCTA
ACAGACTTACCTCGGTTGCCTACAAGTTTTTGACTATCACAAATAGACAAAGTGATGCAG
AATTAAGAGTGTC
■■Homology search results ■■ -
sp_hit_id Q96PY6
Definition sp|Q96PY6|NEK1_HUMAN Serine/threonine-protein kinase Nek1 OS=Homo sapiens
Align length 104
Score (bit) 32.7
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920394|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_E12.
(553 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96PY6|NEK1_HUMAN Serine/threonine-protein kinase Nek1 OS=Hom... 33 1.2
sp|Q75PQ8|ORC2_RAT Origin recognition complex subunit 2 OS=Rattu... 32 2.0
sp|P25118|TNR1A_MOUSE Tumor necrosis factor receptor superfamily... 31 3.5
sp|Q869T2|Y7634_DICDI Putative uncharacterized protein DDB_G0274... 31 4.6
sp|A7KAM0|ATG9_PENCH Autophagy-related protein 9 OS=Penicillium ... 31 4.6
sp|Q9D6J4|NECA3_MOUSE N-terminal EF-hand calcium-binding protein... 30 6.0
sp|P85107|TGS1_RAT Trimethylguanosine synthase homolog OS=Rattus... 30 7.8
sp|Q9VI74|SHQ1_DROME Protein SHQ1 homolog OS=Drosophila melanoga... 30 7.8

>sp|Q96PY6|NEK1_HUMAN Serine/threonine-protein kinase Nek1 OS=Homo
sapiens GN=NEK1 PE=1 SV=2
Length = 1258

Score = 32.7 bits (73), Expect = 1.2
Identities = 30/104 (28%), Positives = 46/104 (44%)
Frame = +3

Query: 159 SALVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTNLSRSSEAEPYGSLAQEELLPA 338
SA+V PV S + E S + DD T + + EP G+ ++E LP
Sbjct: 863 SAIVDSPVETKSPEFSEASPQMSLKLEGNLEEPDDLETEILQ----EPSGT-NKDESLPC 917

Query: 339 LCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSAILD 470
+ VW + +T S+ IT+Q V E+GVS+ +D
Sbjct: 918 TI-----TDVWISEEKETKETQSADRITIQENEVSEDGVSSTVD 956


>sp|Q75PQ8|ORC2_RAT Origin recognition complex subunit 2 OS=Rattus
norvegicus GN=Orc2l PE=2 SV=1
Length = 576

Score = 32.0 bits (71), Expect = 2.0
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3

Query: 120 KSEFSGVQVHDQESALVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTNLSRSSEAE 299
K+EF +Q H+ L++ D++ + ASS E A D+ TN+ R S+
Sbjct: 153 KNEFPSIQPHNVRKRLIASR---SHCDSESEYSASSSEDDEEVAKDDEEDTNVVRCSKK- 208

Query: 300 PYGSLAQEELLPA 338
S Q LLPA
Sbjct: 209 ---SQGQNRLLPA 218


>sp|P25118|TNR1A_MOUSE Tumor necrosis factor receptor superfamily
member 1A OS=Mus musculus GN=Tnfrsf1a PE=1 SV=1
Length = 454

Score = 31.2 bits (69), Expect = 3.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -2

Query: 396 EC--LCLRKPATHETNLAKNTMLVKAPLVLMNHMVLLQSFLTSLCCNHP 256
EC LCL P + TN + V PLV++ + LL SL C +P
Sbjct: 190 ECMKLCLPPPLANVTNPQDSGTAVLLPLVILLGLCLLSFIFISLMCRYP 238


>sp|Q869T2|Y7634_DICDI Putative uncharacterized protein DDB_G0274435
OS=Dictyostelium discoideum GN=DDB_G0274435 PE=4 SV=1
Length = 507

Score = 30.8 bits (68), Expect = 4.6
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +3

Query: 120 KSEFSGVQVHDQESALVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTNLSRSSEAE 299
K++ SG + + +S ++ DS ++ E S S + ++ S N S SS +E
Sbjct: 93 KTDDSGDDLMETDSDNKNKSSESDSSESDSSESESDSSESESESESNETSENES-SSSSE 151

Query: 300 PYGSLAQEELL 332
P SLA+++LL
Sbjct: 152 PESSLAKKKLL 162


>sp|A7KAM0|ATG9_PENCH Autophagy-related protein 9 OS=Penicillium
chrysogenum GN=atg9 PE=3 SV=1
Length = 948

Score = 30.8 bits (68), Expect = 4.6
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +3

Query: 126 EFSGVQVHDQESALVSRPVIDDSKDAQEDEVASS-----KEGSSVTAPKDDCSTNLSRSS 290
E +G+ + DQ+ R + D DAQ+ E+ S + SV AP++ S + +R
Sbjct: 37 ERAGLVIEDQQEQYSDRELEDALADAQDSEIVSPSTALLNQARSVKAPEERASPSGTRRR 96

Query: 291 EAEPYGSLAQEELL 332
++ +AQE L
Sbjct: 97 KSSRPRWMAQESPL 110


>sp|Q9D6J4|NECA3_MOUSE N-terminal EF-hand calcium-binding protein 3
OS=Mus musculus GN=Necab3 PE=2 SV=2
Length = 353

Score = 30.4 bits (67), Expect = 6.0
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -2

Query: 411 LMNQFECLCLRKPATHETNLAK--NTMLVKAPLVLMNHMVLLQSFLTSLCC--NHPSGQS 244
L++Q EC R THE +L K ++ ++ A + LQ F +LCC N QS
Sbjct: 225 LIDQLECKAPRLEPTHEEDLTKGFDSHILVAQRQVQVAEDALQDFHRALCCYMNFTGAQS 284

Query: 243 H 241
H
Sbjct: 285 H 285


>sp|P85107|TGS1_RAT Trimethylguanosine synthase homolog OS=Rattus
norvegicus GN=Tgs1 PE=1 SV=1
Length = 850

Score = 30.0 bits (66), Expect = 7.8
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +3

Query: 186 DDSKDAQEDEVASSKEGSSVTAPKDDCSTNLSRSSEAEPYGSLAQEELLPALCFLPGWSH 365
D D +ED++ S + SSV +++ + + ++AE + L P L W
Sbjct: 139 DWRNDCEEDDLVVSDDPSSVEHCENNSACEIQSKTDAEAENLPVENTLAPKLEVTENWEK 198

Query: 366 VWQAF 380
W +
Sbjct: 199 YWNEY 203


>sp|Q9VI74|SHQ1_DROME Protein SHQ1 homolog OS=Drosophila
melanogaster GN=CG10055 PE=2 SV=1
Length = 608

Score = 30.0 bits (66), Expect = 7.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3

Query: 186 DDSKDAQEDEVASSKEGSSVTAPKDDCSTNLSRSSEAE 299
DD +D +DE E +DD S++ + SSEAE
Sbjct: 553 DDDEDGDDDEDGDGDEDEDEDEDEDDSSSSTTTSSEAE 590


tr_hit_id B4KL25
Definition tr|B4KL25|B4KL25_DROMO GI23099 OS=Drosophila mojavensis
Align length 65
Score (bit) 35.8
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920394|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_E12.
(553 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4KL25|B4KL25_DROMO GI23099 OS=Drosophila mojavensis GN=GI230... 36 1.5
tr|B4NZJ6|B4NZJ6_DROYA Rapgap1 OS=Drosophila yakuba GN=Dyak\Rapg... 35 3.4
tr|B4IZA9|B4IZA9_DROGR GH16383 OS=Drosophila grimshawi GN=GH1638... 35 3.4
tr|Q09CQ9|Q09CQ9_STIAU Cell divisionftsk/spoiiie OS=Stigmatella ... 34 4.5
tr|Q9VM02|Q9VM02_DROME Rapgap1, isoform E OS=Drosophila melanoga... 34 4.5
tr|Q9VM00|Q9VM00_DROME Rapgap1, isoform D OS=Drosophila melanoga... 34 4.5
tr|Q95SF4|Q95SF4_DROME GM01042p OS=Drosophila melanogaster GN=Ra... 34 4.5
tr|Q59DZ5|Q59DZ5_DROME Rapgap1, isoform F OS=Drosophila melanoga... 34 4.5
tr|Q4V5E1|Q4V5E1_DROME RE67551p OS=Drosophila melanogaster GN=Ra... 34 4.5
tr|O44090|O44090_DROME GTPase activating protein for Rap1 OS=Dro... 34 4.5
tr|B4Q5Q6|B4Q5Q6_DROSI GD22487 OS=Drosophila simulans GN=GD22487... 34 4.5
tr|B4HY73|B4HY73_DROSE GM13529 OS=Drosophila sechellia GN=GM1352... 34 4.5
tr|A8DYW8|A8DYW8_DROME Rapgap1, isoform G OS=Drosophila melanoga... 34 4.5
tr|A7BKJ0|A7BKJ0_9GAMM Putative uncharacterized protein OS=Beggi... 34 5.9
tr|A6GG49|A6GG49_9DELT Putative uncharacterized protein OS=Plesi... 34 5.9
tr|B6KLU4|B6KLU4_TOXGO Putative uncharacterized protein OS=Toxop... 34 5.9
tr|Q20JQ4|Q20JQ4_DANRE Voltage-gated sodium channel type V alpha... 33 7.7
tr|A7Y3Y2|A7Y3Y2_DANRE Cardiac voltage-gated sodium channel alph... 33 7.7
tr|B8JLE1|B8JLE1_DANRE Novel protein similar to H.sapiens EPS15,... 33 10.0
tr|Q1N5K1|Q1N5K1_9GAMM Putative uncharacterized protein OS=Ocean... 33 10.0
tr|Q6XIJ6|Q6XIJ6_DROYA Similar to Drosophila melanogaster Rapgap... 33 10.0
tr|B5DHY9|B5DHY9_DROPS GA25836 OS=Drosophila pseudoobscura pseud... 33 10.0
tr|B3MKB8|B3MKB8_DROAN GF14020 OS=Drosophila ananassae GN=GF1402... 33 10.0

>tr|B4KL25|B4KL25_DROMO GI23099 OS=Drosophila mojavensis GN=GI23099
PE=4 SV=1
Length = 844

Score = 35.8 bits (81), Expect = 1.5
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +3

Query: 288 SEAEPYGSLAQEELLPALCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSAIL 467
SEA SL +L P + L G + + T +++ SSAE T +ACS+C EGV
Sbjct: 700 SEASDDSSLNSVDLDPMMGHLDGGAAYIDS--DTGLESMSSAEATTKACSLCLEGVQGTT 757

Query: 468 DWGSN 482
GS+
Sbjct: 758 MMGSS 762


>tr|B4NZJ6|B4NZJ6_DROYA Rapgap1 OS=Drosophila yakuba GN=Dyak\Rapgap1
PE=4 SV=1
Length = 851

Score = 34.7 bits (78), Expect = 3.4
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = +3

Query: 165 LVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTN----LSRSSEAEPYGSLAQEELL 332
+ SR +++ ++ + + G V A + N ++ SE SL +L
Sbjct: 663 ITSRQANNNNTNSNGGLLPQNGSGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLD 722

Query: 333 PALCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSAIL 467
P + L G + + T +++ SSAE T +ACS+C +GV + +
Sbjct: 723 PMMAHLDGGTTYIDS--DTGLESMSSAEATTKACSLCLDGVQSTI 765


>tr|B4IZA9|B4IZA9_DROGR GH16383 OS=Drosophila grimshawi GN=GH16383
PE=4 SV=1
Length = 1768

Score = 34.7 bits (78), Expect = 3.4
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 4/146 (2%)
Frame = +3

Query: 114 SLKSEFSGVQVHDQESALVSRPVIDDSKD----AQEDEVASSKEGSSVTAPKDDCSTNLS 281
S SE S Q S V+ P + S + + E+ + + SSVT P + ST +S
Sbjct: 54 SSSSEESSSQASSSSS--VTEPSTESSTEISSSSTEESASEASSSSSVTEPSTESSTEIS 111

Query: 282 RSSEAEPYGSLAQEELLPALCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSA 461
RSS EP + + P + S++ ++ S A + E S
Sbjct: 112 RSSSEEPSSEASSSSSVTD----PSTESSTEISNSSSEESSSEASSSSSVTEPSTESSSE 167

Query: 462 ILDWGSNRLTSVAYKFLTITNRQSDA 539
I S +S A ++T +D+
Sbjct: 168 ISHSSSEGSSSEASSSSSVTEPSTDS 193


>tr|Q09CQ9|Q09CQ9_STIAU Cell divisionftsk/spoiiie OS=Stigmatella
aurantiaca DW4/3-1 GN=STIAU_2067 PE=4 SV=1
Length = 983

Score = 34.3 bits (77), Expect = 4.5
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +3

Query: 117 LKSEFSGVQVHDQESALVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTNLSRSSEA 296
L++E + E+ ++ + +++A+++++ ++K+ + + L++ A
Sbjct: 221 LEAEREAAEAEAAEAEAMAEEAVRLAREAEKEQLQAAKKAAKEAKEVSREAKPLAKEKPA 280

Query: 297 EPYGSLAQEELLPALCFLPGWSHVWQAFLS 386
EP +AQ E PA PG W +FLS
Sbjct: 281 EPAAPVAQVEKRPA----PGADPAWASFLS 306


>tr|Q9VM02|Q9VM02_DROME Rapgap1, isoform E OS=Drosophila
melanogaster GN=Rapgap1 PE=2 SV=1
Length = 850

Score = 34.3 bits (77), Expect = 4.5
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = +3

Query: 165 LVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTN----LSRSSEAEPYGSLAQEELL 332
+ SR +++ ++ + + G V A + N ++ SE SL +L
Sbjct: 662 ITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLD 721

Query: 333 PALCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSAIL 467
P + L G + + T +++ SSAE T +ACS+C +GV + +
Sbjct: 722 PMMAHLDGGATYIDS--DTGLESMSSAEATTKACSLCLDGVQSTI 764


>tr|Q9VM00|Q9VM00_DROME Rapgap1, isoform D OS=Drosophila melanogaster
GN=Rapgap1 PE=2 SV=2
Length = 933

Score = 34.3 bits (77), Expect = 4.5
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = +3

Query: 165 LVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTN----LSRSSEAEPYGSLAQEELL 332
+ SR +++ ++ + + G V A + N ++ SE SL +L
Sbjct: 745 ITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLD 804

Query: 333 PALCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSAIL 467
P + L G + + T +++ SSAE T +ACS+C +GV + +
Sbjct: 805 PMMAHLDGGATYIDS--DTGLESMSSAEATTKACSLCLDGVQSTI 847


>tr|Q95SF4|Q95SF4_DROME GM01042p OS=Drosophila melanogaster
GN=Rapgap1 PE=2 SV=1
Length = 261

Score = 34.3 bits (77), Expect = 4.5
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = +3

Query: 165 LVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTN----LSRSSEAEPYGSLAQEELL 332
+ SR +++ ++ + + G V A + N ++ SE SL +L
Sbjct: 73 ITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLD 132

Query: 333 PALCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSAIL 467
P + L G + + T +++ SSAE T +ACS+C +GV + +
Sbjct: 133 PMMAHLDGGATYIDS--DTGLESMSSAEATTKACSLCLDGVQSTI 175


>tr|Q59DZ5|Q59DZ5_DROME Rapgap1, isoform F OS=Drosophila
melanogaster GN=Rapgap1 PE=2 SV=1
Length = 876

Score = 34.3 bits (77), Expect = 4.5
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = +3

Query: 165 LVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTN----LSRSSEAEPYGSLAQEELL 332
+ SR +++ ++ + + G V A + N ++ SE SL +L
Sbjct: 688 ITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLD 747

Query: 333 PALCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSAIL 467
P + L G + + T +++ SSAE T +ACS+C +GV + +
Sbjct: 748 PMMAHLDGGATYIDS--DTGLESMSSAEATTKACSLCLDGVQSTI 790


>tr|Q4V5E1|Q4V5E1_DROME RE67551p OS=Drosophila melanogaster
GN=Rapgap1 PE=2 SV=1
Length = 711

Score = 34.3 bits (77), Expect = 4.5
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = +3

Query: 165 LVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTN----LSRSSEAEPYGSLAQEELL 332
+ SR +++ ++ + + G V A + N ++ SE SL +L
Sbjct: 523 ITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLD 582

Query: 333 PALCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSAIL 467
P + L G + + T +++ SSAE T +ACS+C +GV + +
Sbjct: 583 PMMAHLDGGATYIDS--DTGLESMSSAEATTKACSLCLDGVQSTI 625


>tr|O44090|O44090_DROME GTPase activating protein for Rap1
OS=Drosophila melanogaster GN=Rapgap1 PE=2 SV=1
Length = 850

Score = 34.3 bits (77), Expect = 4.5
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = +3

Query: 165 LVSRPVIDDSKDAQEDEVASSKEGSSVTAPKDDCSTN----LSRSSEAEPYGSLAQEELL 332
+ SR +++ ++ + + G V A + N ++ SE SL +L
Sbjct: 662 ITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLD 721

Query: 333 PALCFLPGWSHVWQAFLSTNIQTDSSAEITLQACSVCEEGVSAIL 467
P + L G + + T +++ SSAE T +ACS+C +GV + +
Sbjct: 722 PMMAHLDGGATYIDS--DTGLESMSSAEATTKACSLCLDGVQSTI 764