BP920403
Clone id YMU001_000136_F11
Library
Length 566
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGGGAGTGAAGCTGTGTCTGGGTTCGGGTCTTCAATATTGCCAATGTCGGGTGCAGTTAC
TCTGGAACTAACATGTTGAGTAGCTATAGAGGTGGGCTAGACTCAGGTGCTGCTGGGACA
ATGTATCCCCTAACAAATATGGGTTATCCCAGTATGGATTTTGGGTATGGTGGAATCAGC
TCACAGCCTTCTTTTGGCAAGGAAAGAGAAGGTAAAGATTCCAGGCGACGCCAGAGGTAG
TAATTGATATTTTGAGGGCTCTATGGTGTATGTCTCTGGAGATGATGCTCTTGCTGCTGG
GATTTTGAGAGGGAAGTTGCACAAGTAGTGGCTGCCCTTGAGTTCGCTTCTGACAAGATG
AACTGATTTCAAAATTTTGTTCCTCTTTCCGTGATTCCTTTTTCTACACCCACTATTGGC
CACTGATTGTGTTAGTGGGAGTGTCATAGGGAATCTGCATGGTGGTGCTGACACTCAATT
GTCTTGTGGAGAACAAGCATGTCTTTACTAGCACTTTTCCTTTGAATATGAGTTCGGGCT
TTTCCTAGATTCATTGAACGATATAG
■■Homology search results ■■ -
sp_hit_id P87060
Definition sp|P87060|POP1_SCHPO WD repeat-containing protein pop1 OS=Schizosaccharomyces pombe
Align length 164
Score (bit) 32.3
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920403|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_F11.
(566 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P87060|POP1_SCHPO WD repeat-containing protein pop1 OS=Schizo... 32 1.7
sp|O56861|ENV_FFV Envelope glycoprotein gp130 OS=Feline foamy vi... 31 3.7
sp|O60551|NMT2_HUMAN Glycylpeptide N-tetradecanoyltransferase 2 ... 31 4.9
sp|Q1MIK7|NUOH_RHIL3 NADH-quinone oxidoreductase subunit H OS=Rh... 30 6.4

>sp|P87060|POP1_SCHPO WD repeat-containing protein pop1
OS=Schizosaccharomyces pombe GN=pop1 PE=1 SV=1
Length = 775

Score = 32.3 bits (72), Expect = 1.7
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 15/164 (9%)
Frame = -2

Query: 487 TRQLSVSTTMQIPYDTPTNTISGQ*W---V*KKESRKEEQNFEISSSCQKRTQGQPLLVQ 317
+++++ TT + D P N+++ + + +S+ + SSS + +P++
Sbjct: 173 SKEVASETTFSL--DAPNNSVNYSYFSPNLLGNDSKTRQSFPPHSSSSSHNSLHEPVIYD 230

Query: 316 LPSQNPS---SKSIISRDIHHRALKISITTSGV-----AWNLYLLFP----CQKKAVS*F 173
S+NPS S + S+ + LK++ S + YLLF C K AV
Sbjct: 231 FSSENPSIHPSNHLSSQK--NAVLKLAQLISSFEKLPESVRQYLLFHLLSRCGKHAVQNI 288

Query: 172 HHTQNPYWDNPYLLGDTLSQQHLSLAHLYSYSTC*FQSNCTRHW 41
H P + +L G +L L HL + S C S + HW
Sbjct: 289 HKILLPIFQKNFLTGFPAEITNLVLTHLDAPSLC-AVSQVSHHW 331


>sp|O56861|ENV_FFV Envelope glycoprotein gp130 OS=Feline foamy virus
GN=env PE=1 SV=1
Length = 982

Score = 31.2 bits (69), Expect = 3.7
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -2

Query: 304 NPSSKSIISRDIHHRALKISITTSGVAWNLYLLFPCQKKAVS*FHHTQNPYWDNPYLL-G 128
N SS S RDI + L + + SG+ L+ F Q K + FH + L+
Sbjct: 118 NTSSSSRRRRDIQYHKLPVEVNISGIPQGLF--FAPQPKPI--FHKERTLGLSQVILIDS 173

Query: 127 DTLSQQHLSLAHLYSYST 74
DT++Q H+ Y ST
Sbjct: 174 DTITQGHIKQQKAYLVST 191


>sp|O60551|NMT2_HUMAN Glycylpeptide N-tetradecanoyltransferase 2
OS=Homo sapiens GN=NMT2 PE=1 SV=1
Length = 498

Score = 30.8 bits (68), Expect = 4.9
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -2

Query: 403 KKESRKEEQNFEISSSCQKRTQGQPLLVQLPSQNPSSKSIISRDIHHRALKISITTSGVA 224
KK+ RK+E+ + + Q + +Q PS+NPS +DI RA+++ G A
Sbjct: 50 KKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDI-QRAMELLSACQGPA 108

Query: 223 WNL 215
N+
Sbjct: 109 RNI 111


>sp|Q1MIK7|NUOH_RHIL3 NADH-quinone oxidoreductase subunit H
OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=nuoH PE=3 SV=1
Length = 347

Score = 30.4 bits (67), Expect = 6.4
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +3

Query: 393 DSFFYTHYWPLIVLVGVS--*GICMVVLTLNCLVENKHVFTS 512
DSFF T+ WP I+++G S +C++V L+ ++ ++ +
Sbjct: 2 DSFFSTYVWPAIIMIGQSLLLLVCLLVFIAYVLLADRKIWAA 43


tr_hit_id Q1EQ25
Definition tr|Q1EQ25|Q1EQ25_ENTHI Beta subunit isoform c OS=Entamoeba histolytica
Align length 102
Score (bit) 36.2
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920403|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_F11.
(566 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1EQ25|Q1EQ25_ENTHI Beta subunit isoform c OS=Entamoeba histo... 36 1.3
tr|A5K9P7|A5K9P7_PLAVI WD-repeat potein, putative OS=Plasmodium ... 35 3.7
tr|B0EHQ0|B0EHQ0_ENTDI AP-2 complex subunit beta, putative OS=En... 34 6.4
tr|A4S9N8|A4S9N8_OSTLU Predicted protein OS=Ostreococcus lucimar... 33 8.3
tr|Q5DHV5|Q5DHV5_SCHJA SJCHGC06037 protein OS=Schistosoma japoni... 33 8.3

>tr|Q1EQ25|Q1EQ25_ENTHI Beta subunit isoform c OS=Entamoeba
histolytica PE=4 SV=1
Length = 678

Score = 36.2 bits (82), Expect = 1.3
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Frame = -2

Query: 535 ELIFKGKVLVKTCLFSTRQL-----SVSTTMQIP------YDTPTNTISGQ*WV*KKESR 389
E + KGK + + R++ S+ST ++IP Y P TI +K+
Sbjct: 561 EKLVKGKTVGMEKVLERREMLMNIGSISTVLEIPKKDIKSYSAPKRTIKNIVGDKEKQQE 620

Query: 388 KEEQNFEISSSC-QKRTQGQPLLVQLPSQNPSSKSIISRDIH 266
+E+N EI + QKR QG ++ + ++ +S +S ++H
Sbjct: 621 LDEKNKEIYAQLKQKRNQGNQKILSVENERINSLISVSNNVH 662


>tr|A5K9P7|A5K9P7_PLAVI WD-repeat potein, putative OS=Plasmodium
vivax GN=PVX_080690 PE=4 SV=1
Length = 522

Score = 34.7 bits (78), Expect = 3.7
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -2

Query: 373 FEISSSCQKRT-QGQPLLVQLPSQNPSSKSIISRDIHHRALKISITTSGVAWNLYLLFPC 197
F+I+S Q++ +G V S +P+ ++++S + ++ + + ++L++ FP
Sbjct: 355 FDINSLRQRQILRGHVDSVNSVSFHPTYRTLVSASVDKTVIQKVLANASKRFSLFIAFPS 414

Query: 196 QKKAVS*FHHTQNPYWD 146
++K +S F TQ WD
Sbjct: 415 KRKNISIFVFTQVSIWD 431


>tr|B0EHQ0|B0EHQ0_ENTDI AP-2 complex subunit beta, putative
OS=Entamoeba dispar SAW760 GN=EDI_329330 PE=4 SV=1
Length = 758

Score = 33.9 bits (76), Expect = 6.4
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Frame = -2

Query: 535 ELIFKGKVLVKTCLFSTRQL-----SVSTTMQIP------YDTPTNTISGQ*WV*KKESR 389
E + KGK + + R++ S+ST ++IP Y P TI +K+
Sbjct: 561 EKLIKGKTVGMEKVIERREMLMNIGSISTVLEIPKKDIKSYSEPKKTIKNIIGDKEKQQE 620

Query: 388 KEEQNFEISSSC-QKRTQGQPLLVQLPSQNPSSKSIISRDIH 266
+E+N I + QKR QG ++ + ++ +S +S +IH
Sbjct: 621 LDEKNKTIYAQLKQKRNQGNQKILSVENERINSLINVSNNIH 662


>tr|A4S9N8|A4S9N8_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_25721 PE=4 SV=1
Length = 848

Score = 33.5 bits (75), Expect = 8.3
Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = -3

Query: 504 RHACSPQDN*VSAPPCRFPMTLPLTQSVANSGCRKRNHGKRNKILKSVHLV--RSELKGS 331
R S D VSAPP TLPL ++ KS HL+ + E+K S
Sbjct: 509 RAQTSRYDEFVSAPPALVERTLPLIKT------------------KSGHLIVDQDEVKRS 550

Query: 330 HYLCNFPLKIPA---ARASSPETYTIEPSKYQLLPLASPGIFTF 208
NFP+ I A R+ +P + IEP P ++PG TF
Sbjct: 551 ---SNFPIDIEAKRYKRSITPSSADIEPGS----PGSTPGTMTF 587


>tr|Q5DHV5|Q5DHV5_SCHJA SJCHGC06037 protein OS=Schistosoma japonicum
PE=2 SV=1
Length = 425

Score = 33.5 bits (75), Expect = 8.3
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Frame = -2

Query: 367 ISSSCQKRT-----QGQPLLVQLPSQNPSSKSIISRDIHHRA--------LKISITTSGV 227
+ +SC++ T Q +P+L+Q P N S I+S + + S + + V
Sbjct: 77 VLASCRRCTLHLSIQSRPILIQPPVPNTSGSVIVSNTLGNNTSTNTPAPGTPTSSSVTLV 136

Query: 226 AWNLYLLFPCQKKAVS*FHHTQNP-------YWDNPYLLGDTLSQQHLS 101
LL P + H YWD P+LLG ++Q LS
Sbjct: 137 GNEEILLAPFHTTYMKLMDHLNKVNLSPKVNYWDRPFLLGQDFNRQDLS 185