BP920404
Clone id YMU001_000136_F12
Library
Length 402
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGAATGTGAGGGGAGGCTCAAATTTGGGAAAAGGGGAGAGCCCGTAAACTGTCCAGAACC
CTTACCTTTTATATCTTGCTTATCCAAAGGGACTGCATTTGATACAAAAGGGATTGCAGG
CATTGAAGGAAATTTAGAAGCTTTTTCCTTCTTCTTATCCTTGGGATGTTCTGGAGTATG
CCTGTACATGTCTTTATGGCTTGAGTAAACTACCTTCTTGGCAGCACTGCTCAGATATTG
AGCCACACCCTCAAAAGCTGGCAACGCATGTAATAATCCTGGATCCGGAAATTTCTGAGG
AAAGGGCTTGGGCATGGCAAACGAGTCATGGAAAAAGCGGTGGCGTAATGCTGCTGAAGC
GGATGGGCGACTACCTCCCAAACTAGGCCAAACGAGCTGATC
■■Homology search results ■■ -
sp_hit_id Q01638
Definition sp|Q01638|ILRL1_HUMAN Interleukin-1 receptor-like 1 OS=Homo sapiens
Align length 90
Score (bit) 38.5
E-value 0.01
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920404|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_F12.
(402 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q01638|ILRL1_HUMAN Interleukin-1 receptor-like 1 OS=Homo sapi... 39 0.010
sp|Q6C3B0|SEY1_YARLI Protein SEY1 OS=Yarrowia lipolytica GN=SEY1... 32 0.75
sp|Q12815|TROAP_HUMAN Trophinin-associated protein OS=Homo sapie... 31 1.7
sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE... 31 2.2
sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-... 30 2.8
sp|P82179|TRDN_CANFA Triadin OS=Canis familiaris GN=TRDN PE=1 SV=2 30 4.8
sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1 30 4.8
sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 ... 30 4.8
sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 ... 30 4.8
sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=... 30 4.8
sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis silvestris catus GN... 30 4.8
sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2... 30 4.8
sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI P... 30 4.8
sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1 30 4.8
sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-... 30 4.8
sp|Q6NZK8|PTPC1_MOUSE Protein tyrosine phosphatase domain-contai... 29 6.3
sp|Q9NZ81|PRR13_HUMAN Proline-rich protein 13 OS=Homo sapiens GN... 29 6.3
sp|Q9IDV9|POL_HV1YB Gag-Pol polyprotein OS=Human immunodeficienc... 29 6.3
sp|Q9IDV8|GAG_HV1YB Gag polyprotein OS=Human immunodeficiency vi... 29 6.3
sp|A1SBD7|CYOE_SHEAM Protoheme IX farnesyltransferase OS=Shewane... 29 6.3
sp|Q8N137|CNTRB_HUMAN Centrobin OS=Homo sapiens GN=CNTROB PE=1 SV=1 29 6.3
sp|P55198|AF17_HUMAN Protein AF-17 OS=Homo sapiens GN=MLLT6 PE=1... 29 6.3
sp|P32522|PT309_YEAST Pentatricopeptide repeat-containing protei... 29 6.3
sp|Q5T089|MORN1_HUMAN MORN repeat-containing protein 1 OS=Homo s... 29 6.3
sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergil... 29 6.3
sp|P36891|REPS_STRAM Replication initiator protein OS=Streptomyc... 29 8.3
sp|Q5Z7L0|BGAL9_ORYSJ Beta-galactosidase 9 OS=Oryza sativa subsp... 29 8.3

>sp|Q01638|ILRL1_HUMAN Interleukin-1 receptor-like 1 OS=Homo sapiens
GN=IL1RL1 PE=1 SV=4
Length = 556

Score = 38.5 bits (88), Expect = 0.010
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3

Query: 63 YLLYLAYPKGLHLIQKGLQALKE-I*KLFPSSYPWDVLEYAC---TCLYGLSKLPSWQHC 230
Y Y+ YP+ G ++ + ++ P DVLE C C+YG LP
Sbjct: 377 YDAYVVYPRNYKSSTDGASRVEHFVHQILP-----DVLENKCGYTLCIYGRDMLPGEDVV 431

Query: 231 SDIEPHPQKLATHVIILDPEISEERAWAWQ 320
+ +E + +K H+ IL P+I+ + +A++
Sbjct: 432 TAVETNIRKSRRHIFILTPQITHNKEFAYE 461


>sp|Q6C3B0|SEY1_YARLI Protein SEY1 OS=Yarrowia lipolytica GN=SEY1
PE=3 SV=1
Length = 938

Score = 32.3 bits (72), Expect = 0.75
Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 2/120 (1%)
Frame = -1

Query: 387 PSLGGSRPSASAALRHRFFHDSFAMPKPF--PQKFPDPGLLHALPAFEGVAQYLSSAAKK 214
P SRP + + + A P+P P+ P P + A P EG+ + K
Sbjct: 52 PPPPASRPVRESGVAPVTAPEPIAAPEPIAAPEPIPAPEPI-AAPVPEGL-----KSEHK 105

Query: 213 VVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDIKGKGSGQFTGSP 34
V HK + R P +K +S P S+AVP ++ K G + G P
Sbjct: 106 PVEREHKPVERKPVSSPAEKSIPASSPVHKAAPTPAASHAVPTSQKSAKST-PGSYAGIP 164


>sp|Q12815|TROAP_HUMAN Trophinin-associated protein OS=Homo sapiens
GN=TROAP PE=1 SV=3
Length = 778

Score = 31.2 bits (69), Expect = 1.7
Identities = 25/79 (31%), Positives = 33/79 (41%)
Frame = -1

Query: 330 HDSFAMPKPFPQKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151
HDS MP P P P PG + P+ G AQ + S + S + R PK
Sbjct: 300 HDSHLMPSPAPVAQPLPGHVVPCPSPFGRAQRVPSPGPPTLTS--YSVLRRLTVQPK--- 354

Query: 150 KEKASKFPSMPAIPFVSNA 94
++F MP+ P V A
Sbjct: 355 ----TRFTPMPSTPRVQQA 369


>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2
SV=1
Length = 319

Score = 30.8 bits (68), Expect = 2.2
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1

Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151
PKP P Q D L+ +LP F G+ +L + + KDMY T DK+
Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKR 68


>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-A
PE=1 SV=2
Length = 341

Score = 30.4 bits (67), Expect = 2.8
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -1

Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKKK 148
PKP P Q D L+ +LP F G+ +L + + KDMY T ++K+
Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYNDTMNSSSNEKR 69


>sp|P82179|TRDN_CANFA Triadin OS=Canis familiaris GN=TRDN PE=1 SV=2
Length = 701

Score = 29.6 bits (65), Expect = 4.8
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1

Query: 252 EGVAQYLSSAAKKVVYSSHKDMYRHTP--EHPKDKKKEKASKFPSMPAIPFVSNAVPLDK 79
+G + ++ AA K TP EHPK KK+EK K+ ++ P +K
Sbjct: 354 QGTIKVVAQAAAKKDEKKEDSKKTKTPVEEHPKGKKQEKKEKYVEPAKSSKKEHSAPSEK 413

Query: 78 QDIKGK 61
Q +K K
Sbjct: 414 Q-VKAK 418


>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1
Length = 341

Score = 29.6 bits (65), Expect = 4.8
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1

Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151
PKP P Q D L+ +LP F G+ +L + + KDMY T +K+
Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKR 68


>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1
SV=1
Length = 341

Score = 29.6 bits (65), Expect = 4.8
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1

Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151
PKP P Q D L+ +LP F G+ +L + + KDMY T +K+
Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKR 68


>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1
SV=1
Length = 341

Score = 29.6 bits (65), Expect = 4.8
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1

Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151
PKP P Q D L+ +LP F G+ +L + + KDMY T +K+
Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKR 68


>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2
SV=1
Length = 341

Score = 29.6 bits (65), Expect = 4.8
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1

Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151
PKP P Q D L+ +LP F G+ +L + + KDMY T +K+
Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKR 68


tr_hit_id B0X803
Definition tr|B0X803|B0X803_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus
Align length 50
Score (bit) 36.2
E-value 0.85
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920404|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_F12.
(402 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0X803|B0X803_CULQU Putative uncharacterized protein OS=Culex... 36 0.85
tr|Q13SF4|Q13SF4_BURXL Putative uncharacterized protein OS=Burkh... 35 2.5
tr|B0WSK7|B0WSK7_CULQU Putative uncharacterized protein OS=Culex... 34 3.2
tr|B2B5F8|B2B5F8_PODAN Predicted CDS Pa_2_4530 OS=Podospora anse... 34 3.2
tr|Q9PVN7|Q9PVN7_XENLA Xsal-3 long form OS=Xenopus laevis GN=Xsa... 34 4.2
tr|Q9PVN6|Q9PVN6_XENLA Xsal-3 short form OS=Xenopus laevis GN=Xs... 34 4.2
tr|Q501Q2|Q501Q2_XENLA Putative uncharacterized protein OS=Xenop... 34 4.2
tr|A7R6V8|A7R6V8_VITVI Chromosome undetermined scaffold_1440, wh... 33 5.5
tr|A7R098|A7R098_VITVI Chromosome undetermined scaffold_300, who... 33 5.5
tr|A6WSV7|A6WSV7_SHEB8 Carbohydrate kinase, YjeF related protein... 33 7.0
tr|A0ZLM8|A0ZLM8_NODSP Putative uncharacterized protein OS=Nodul... 33 7.0
tr|A4HFN9|A4HFN9_LEIBR Putative uncharacterized protein OS=Leish... 33 7.2
tr|A2EJ13|A2EJ13_TRIVA Putative uncharacterized protein OS=Trich... 33 7.2
tr|Q1D540|Q1D540_MYXXD Putative uncharacterized protein OS=Myxoc... 33 9.4
tr|Q53KH0|Q53KH0_ORYSJ Retrotransposon, putative, centromere-spe... 33 9.4
tr|A7P8W0|A7P8W0_VITVI Chromosome chr3 scaffold_8, whole genome ... 33 9.4
tr|A2QCI5|A2QCI5_ASPNC Similarity OS=Aspergillus niger (strain C... 33 9.4

>tr|B0X803|B0X803_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ015598 PE=4 SV=1
Length = 376

Score = 36.2 bits (82), Expect = 0.85
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -1

Query: 312 PKPFPQKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHP 163
P+P PQ PDPG+L L + E A+ L + A V K HTP P
Sbjct: 138 PQPLPQAQPDPGMLELLTSSENHARVLEAQAVAV----RKSAALHTPAEP 183


>tr|Q13SF4|Q13SF4_BURXL Putative uncharacterized protein
OS=Burkholderia xenovorans (strain LB400) GN=Bxeno_B0017
PE=4 SV=1
Length = 591

Score = 34.7 bits (78), Expect = 2.5
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 12/111 (10%)
Frame = -1

Query: 366 PSASAALRHRFF-----HDSFAMPKPFPQK-------FPDPGLLHALPAFEGVAQYLSSA 223
PSA+ ALR R + + FA+ Q+ DP L A+PAFE + A
Sbjct: 162 PSAAQALRLRTWLANDLQEVFALTLDHAQRAASAVYHLTDP--LWAIPAFEAFGKKQGKA 219

Query: 222 AKKVVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDI 70
+ +VY SHK + P P + P++ + V+ P DK I
Sbjct: 220 SLAIVYDSHKVSQKGKPPAPSPNQ-------PAVDELGDVATFAPRDKTHI 263


>tr|B0WSK7|B0WSK7_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ010240 PE=4 SV=1
Length = 383

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -1

Query: 312 PKPFPQKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHP 163
P+P PQ PDPG+L L + E + L + A V K HTP P
Sbjct: 57 PQPLPQAQPDPGMLKLLTSSENHVRVLEAQAAAV----RKPAALHTPAEP 102


>tr|B2B5F8|B2B5F8_PODAN Predicted CDS Pa_2_4530 OS=Podospora
anserina PE=4 SV=1
Length = 1605

Score = 34.3 bits (77), Expect = 3.2
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = -1

Query: 306 PFPQKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKKKEKASKFP 127
P P K P + A + A + +AAK+ + S K+ R P+ KDK K++
Sbjct: 596 PLPTKAPAQSSIPGSQAVQTAASGIFAAAKQTI--SSKEQTRSAPQEDKDKTKQRVPPVA 653

Query: 126 SMPAIPFVSNAVPLDKQDIKGK 61
+ P+ S+ D K K
Sbjct: 654 AKPSQVKESSGAVKKNSDTKSK 675


>tr|Q9PVN7|Q9PVN7_XENLA Xsal-3 long form OS=Xenopus laevis GN=Xsal-3
PE=4 SV=1
Length = 1061

Score = 33.9 bits (76), Expect = 4.2
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -1

Query: 216 KVVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDIKGKGSGQFTGS 37
KV + HKD Y H +P E P+ IP+ +VPLD+ ++ TG
Sbjct: 398 KVHFQRHKDKYPHIKMNPY-PVPEHLDNVPTTSGIPY-GMSVPLDESNLIADTKSGLTGL 455

Query: 36 PLFPNLS 16
P NLS
Sbjct: 456 PSATNLS 462


>tr|Q9PVN6|Q9PVN6_XENLA Xsal-3 short form OS=Xenopus laevis
GN=Xsal-3 PE=4 SV=1
Length = 826

Score = 33.9 bits (76), Expect = 4.2
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -1

Query: 216 KVVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDIKGKGSGQFTGS 37
KV + HKD Y H +P E P+ IP+ +VPLD+ ++ TG
Sbjct: 398 KVHFQRHKDKYPHIKMNPY-PVPEHLDNVPTTSGIPY-GMSVPLDESNLIADTKSGLTGL 455

Query: 36 PLFPNLS 16
P NLS
Sbjct: 456 PSATNLS 462


>tr|Q501Q2|Q501Q2_XENLA Putative uncharacterized protein OS=Xenopus
laevis PE=2 SV=1
Length = 698

Score = 33.9 bits (76), Expect = 4.2
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -1

Query: 216 KVVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDIKGKGSGQFTGS 37
KV + HKD Y H +P E P+ IP+ +VPLD+ ++ TG
Sbjct: 398 KVHFQRHKDKYPHIKMNPY-PVPEHLDNVPTTSGIPY-GMSVPLDESNLIADTKSGLTGL 455

Query: 36 PLFPNLS 16
P NLS
Sbjct: 456 PSATNLS 462


>tr|A7R6V8|A7R6V8_VITVI Chromosome undetermined scaffold_1440, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00008427001 PE=4 SV=1
Length = 359

Score = 33.5 bits (75), Expect = 5.5
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -1

Query: 390 WPSLGGSRPSASAALRHRFFHDSFAMPKPFPQKF 289
W LG RP+A AL+H FFH +P P P F
Sbjct: 177 WDPLG--RPTAEQALKHPFFHVGKWVPHPLPDPF 208


>tr|A7R098|A7R098_VITVI Chromosome undetermined scaffold_300, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00011030001 PE=4 SV=1
Length = 249

Score = 33.5 bits (75), Expect = 5.5
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -1

Query: 390 WPSLGGSRPSASAALRHRFFHDSFAMPKPFPQKF 289
W LG RP+A AL+H FFH +P P P F
Sbjct: 91 WDPLG--RPTAEQALKHPFFHVGKWVPHPLPDPF 122


>tr|A6WSV7|A6WSV7_SHEB8 Carbohydrate kinase, YjeF related protein
OS=Shewanella baltica (strain OS185) GN=Shew185_3772
PE=4 SV=1
Length = 494

Score = 33.1 bits (74), Expect = 7.0
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3

Query: 201 LSKLPSWQHCSDIEPHPQKLATHVIILDPEISEERAWAWQTSHGKSGGVMLLKRMG 368
LS P WQ + PHP + A + EI ++R A + K GGV+LLK G
Sbjct: 353 LSNEPRWQTNWVLTPHPGEAARLLGCSVAEIEQDRFAAVRVIQQKYGGVVLLKGAG 408