| BP920404 |
| Clone id |
YMU001_000136_F12 |
| Library |
YMU01 |
| Length |
402 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000136_F12. |
| Accession |
BP920404 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL2477Contig1 |
| Sequence |
AGAATGTGAGGGGAGGCTCAAATTTGGGAAAAGGGGAGAGCCCGTAAACTGTCCAGAACC CTTACCTTTTATATCTTGCTTATCCAAAGGGACTGCATTTGATACAAAAGGGATTGCAGG CATTGAAGGAAATTTAGAAGCTTTTTCCTTCTTCTTATCCTTGGGATGTTCTGGAGTATG CCTGTACATGTCTTTATGGCTTGAGTAAACTACCTTCTTGGCAGCACTGCTCAGATATTG AGCCACACCCTCAAAAGCTGGCAACGCATGTAATAATCCTGGATCCGGAAATTTCTGAGG AAAGGGCTTGGGCATGGCAAACGAGTCATGGAAAAAGCGGTGGCGTAATGCTGCTGAAGC GGATGGGCGACTACCTCCCAAACTAGGCCAAACGAGCTGATC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q01638 |
| Definition |
sp|Q01638|ILRL1_HUMAN Interleukin-1 receptor-like 1 OS=Homo sapiens |
| Align length |
90 |
| Score (bit) |
38.5 |
| E-value |
0.01 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920404|Adiantum capillus-veneris mRNA, clone: YMU001_000136_F12. (402 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q01638|ILRL1_HUMAN Interleukin-1 receptor-like 1 OS=Homo sapi... 39 0.010 sp|Q6C3B0|SEY1_YARLI Protein SEY1 OS=Yarrowia lipolytica GN=SEY1... 32 0.75 sp|Q12815|TROAP_HUMAN Trophinin-associated protein OS=Homo sapie... 31 1.7 sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE... 31 2.2 sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-... 30 2.8 sp|P82179|TRDN_CANFA Triadin OS=Canis familiaris GN=TRDN PE=1 SV=2 30 4.8 sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1 30 4.8 sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 ... 30 4.8 sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 ... 30 4.8 sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=... 30 4.8 sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis silvestris catus GN... 30 4.8 sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2... 30 4.8 sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI P... 30 4.8 sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1 30 4.8 sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-... 30 4.8 sp|Q6NZK8|PTPC1_MOUSE Protein tyrosine phosphatase domain-contai... 29 6.3 sp|Q9NZ81|PRR13_HUMAN Proline-rich protein 13 OS=Homo sapiens GN... 29 6.3 sp|Q9IDV9|POL_HV1YB Gag-Pol polyprotein OS=Human immunodeficienc... 29 6.3 sp|Q9IDV8|GAG_HV1YB Gag polyprotein OS=Human immunodeficiency vi... 29 6.3 sp|A1SBD7|CYOE_SHEAM Protoheme IX farnesyltransferase OS=Shewane... 29 6.3 sp|Q8N137|CNTRB_HUMAN Centrobin OS=Homo sapiens GN=CNTROB PE=1 SV=1 29 6.3 sp|P55198|AF17_HUMAN Protein AF-17 OS=Homo sapiens GN=MLLT6 PE=1... 29 6.3 sp|P32522|PT309_YEAST Pentatricopeptide repeat-containing protei... 29 6.3 sp|Q5T089|MORN1_HUMAN MORN repeat-containing protein 1 OS=Homo s... 29 6.3 sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergil... 29 6.3 sp|P36891|REPS_STRAM Replication initiator protein OS=Streptomyc... 29 8.3 sp|Q5Z7L0|BGAL9_ORYSJ Beta-galactosidase 9 OS=Oryza sativa subsp... 29 8.3
>sp|Q01638|ILRL1_HUMAN Interleukin-1 receptor-like 1 OS=Homo sapiens GN=IL1RL1 PE=1 SV=4 Length = 556
Score = 38.5 bits (88), Expect = 0.010 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%) Frame = +3
Query: 63 YLLYLAYPKGLHLIQKGLQALKE-I*KLFPSSYPWDVLEYAC---TCLYGLSKLPSWQHC 230 Y Y+ YP+ G ++ + ++ P DVLE C C+YG LP Sbjct: 377 YDAYVVYPRNYKSSTDGASRVEHFVHQILP-----DVLENKCGYTLCIYGRDMLPGEDVV 431
Query: 231 SDIEPHPQKLATHVIILDPEISEERAWAWQ 320 + +E + +K H+ IL P+I+ + +A++ Sbjct: 432 TAVETNIRKSRRHIFILTPQITHNKEFAYE 461
>sp|Q6C3B0|SEY1_YARLI Protein SEY1 OS=Yarrowia lipolytica GN=SEY1 PE=3 SV=1 Length = 938
Score = 32.3 bits (72), Expect = 0.75 Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 2/120 (1%) Frame = -1
Query: 387 PSLGGSRPSASAALRHRFFHDSFAMPKPF--PQKFPDPGLLHALPAFEGVAQYLSSAAKK 214 P SRP + + + A P+P P+ P P + A P EG+ + K Sbjct: 52 PPPPASRPVRESGVAPVTAPEPIAAPEPIAAPEPIPAPEPI-AAPVPEGL-----KSEHK 105
Query: 213 VVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDIKGKGSGQFTGSP 34 V HK + R P +K +S P S+AVP ++ K G + G P Sbjct: 106 PVEREHKPVERKPVSSPAEKSIPASSPVHKAAPTPAASHAVPTSQKSAKST-PGSYAGIP 164
>sp|Q12815|TROAP_HUMAN Trophinin-associated protein OS=Homo sapiens GN=TROAP PE=1 SV=3 Length = 778
Score = 31.2 bits (69), Expect = 1.7 Identities = 25/79 (31%), Positives = 33/79 (41%) Frame = -1
Query: 330 HDSFAMPKPFPQKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151 HDS MP P P P PG + P+ G AQ + S + S + R PK Sbjct: 300 HDSHLMPSPAPVAQPLPGHVVPCPSPFGRAQRVPSPGPPTLTS--YSVLRRLTVQPK--- 354
Query: 150 KEKASKFPSMPAIPFVSNA 94 ++F MP+ P V A Sbjct: 355 ----TRFTPMPSTPRVQQA 369
>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1 Length = 319
Score = 30.8 bits (68), Expect = 2.2 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = -1
Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151 PKP P Q D L+ +LP F G+ +L + + KDMY T DK+ Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKR 68
>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 SV=2 Length = 341
Score = 30.4 bits (67), Expect = 2.8 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = -1
Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKKK 148 PKP P Q D L+ +LP F G+ +L + + KDMY T ++K+ Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYNDTMNSSSNEKR 69
>sp|P82179|TRDN_CANFA Triadin OS=Canis familiaris GN=TRDN PE=1 SV=2 Length = 701
Score = 29.6 bits (65), Expect = 4.8 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -1
Query: 252 EGVAQYLSSAAKKVVYSSHKDMYRHTP--EHPKDKKKEKASKFPSMPAIPFVSNAVPLDK 79 +G + ++ AA K TP EHPK KK+EK K+ ++ P +K Sbjct: 354 QGTIKVVAQAAAKKDEKKEDSKKTKTPVEEHPKGKKQEKKEKYVEPAKSSKKEHSAPSEK 413
Query: 78 QDIKGK 61 Q +K K Sbjct: 414 Q-VKAK 418
>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1 Length = 341
Score = 29.6 bits (65), Expect = 4.8 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = -1
Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151 PKP P Q D L+ +LP F G+ +L + + KDMY T +K+ Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKR 68
>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1 Length = 341
Score = 29.6 bits (65), Expect = 4.8 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = -1
Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151 PKP P Q D L+ +LP F G+ +L + + KDMY T +K+ Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKR 68
>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1 Length = 341
Score = 29.6 bits (65), Expect = 4.8 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = -1
Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151 PKP P Q D L+ +LP F G+ +L + + KDMY T +K+ Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKR 68
>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1 Length = 341
Score = 29.6 bits (65), Expect = 4.8 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = -1
Query: 312 PKPFP----QKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKK 151 PKP P Q D L+ +LP F G+ +L + + KDMY T +K+ Sbjct: 11 PKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKR 68
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B0X803 |
| Definition |
tr|B0X803|B0X803_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus |
| Align length |
50 |
| Score (bit) |
36.2 |
| E-value |
0.85 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920404|Adiantum capillus-veneris mRNA, clone: YMU001_000136_F12. (402 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B0X803|B0X803_CULQU Putative uncharacterized protein OS=Culex... 36 0.85 tr|Q13SF4|Q13SF4_BURXL Putative uncharacterized protein OS=Burkh... 35 2.5 tr|B0WSK7|B0WSK7_CULQU Putative uncharacterized protein OS=Culex... 34 3.2 tr|B2B5F8|B2B5F8_PODAN Predicted CDS Pa_2_4530 OS=Podospora anse... 34 3.2 tr|Q9PVN7|Q9PVN7_XENLA Xsal-3 long form OS=Xenopus laevis GN=Xsa... 34 4.2 tr|Q9PVN6|Q9PVN6_XENLA Xsal-3 short form OS=Xenopus laevis GN=Xs... 34 4.2 tr|Q501Q2|Q501Q2_XENLA Putative uncharacterized protein OS=Xenop... 34 4.2 tr|A7R6V8|A7R6V8_VITVI Chromosome undetermined scaffold_1440, wh... 33 5.5 tr|A7R098|A7R098_VITVI Chromosome undetermined scaffold_300, who... 33 5.5 tr|A6WSV7|A6WSV7_SHEB8 Carbohydrate kinase, YjeF related protein... 33 7.0 tr|A0ZLM8|A0ZLM8_NODSP Putative uncharacterized protein OS=Nodul... 33 7.0 tr|A4HFN9|A4HFN9_LEIBR Putative uncharacterized protein OS=Leish... 33 7.2 tr|A2EJ13|A2EJ13_TRIVA Putative uncharacterized protein OS=Trich... 33 7.2 tr|Q1D540|Q1D540_MYXXD Putative uncharacterized protein OS=Myxoc... 33 9.4 tr|Q53KH0|Q53KH0_ORYSJ Retrotransposon, putative, centromere-spe... 33 9.4 tr|A7P8W0|A7P8W0_VITVI Chromosome chr3 scaffold_8, whole genome ... 33 9.4 tr|A2QCI5|A2QCI5_ASPNC Similarity OS=Aspergillus niger (strain C... 33 9.4
>tr|B0X803|B0X803_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ015598 PE=4 SV=1 Length = 376
Score = 36.2 bits (82), Expect = 0.85 Identities = 20/50 (40%), Positives = 25/50 (50%) Frame = -1
Query: 312 PKPFPQKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHP 163 P+P PQ PDPG+L L + E A+ L + A V K HTP P Sbjct: 138 PQPLPQAQPDPGMLELLTSSENHARVLEAQAVAV----RKSAALHTPAEP 183
>tr|Q13SF4|Q13SF4_BURXL Putative uncharacterized protein OS=Burkholderia xenovorans (strain LB400) GN=Bxeno_B0017 PE=4 SV=1 Length = 591
Score = 34.7 bits (78), Expect = 2.5 Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 12/111 (10%) Frame = -1
Query: 366 PSASAALRHRFF-----HDSFAMPKPFPQK-------FPDPGLLHALPAFEGVAQYLSSA 223 PSA+ ALR R + + FA+ Q+ DP L A+PAFE + A Sbjct: 162 PSAAQALRLRTWLANDLQEVFALTLDHAQRAASAVYHLTDP--LWAIPAFEAFGKKQGKA 219
Query: 222 AKKVVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDI 70 + +VY SHK + P P + P++ + V+ P DK I Sbjct: 220 SLAIVYDSHKVSQKGKPPAPSPNQ-------PAVDELGDVATFAPRDKTHI 263
>tr|B0WSK7|B0WSK7_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ010240 PE=4 SV=1 Length = 383
Score = 34.3 bits (77), Expect = 3.2 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -1
Query: 312 PKPFPQKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHP 163 P+P PQ PDPG+L L + E + L + A V K HTP P Sbjct: 57 PQPLPQAQPDPGMLKLLTSSENHVRVLEAQAAAV----RKPAALHTPAEP 102
>tr|B2B5F8|B2B5F8_PODAN Predicted CDS Pa_2_4530 OS=Podospora anserina PE=4 SV=1 Length = 1605
Score = 34.3 bits (77), Expect = 3.2 Identities = 22/82 (26%), Positives = 35/82 (42%) Frame = -1
Query: 306 PFPQKFPDPGLLHALPAFEGVAQYLSSAAKKVVYSSHKDMYRHTPEHPKDKKKEKASKFP 127 P P K P + A + A + +AAK+ + S K+ R P+ KDK K++ Sbjct: 596 PLPTKAPAQSSIPGSQAVQTAASGIFAAAKQTI--SSKEQTRSAPQEDKDKTKQRVPPVA 653
Query: 126 SMPAIPFVSNAVPLDKQDIKGK 61 + P+ S+ D K K Sbjct: 654 AKPSQVKESSGAVKKNSDTKSK 675
>tr|Q9PVN7|Q9PVN7_XENLA Xsal-3 long form OS=Xenopus laevis GN=Xsal-3 PE=4 SV=1 Length = 1061
Score = 33.9 bits (76), Expect = 4.2 Identities = 22/67 (32%), Positives = 30/67 (44%) Frame = -1
Query: 216 KVVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDIKGKGSGQFTGS 37 KV + HKD Y H +P E P+ IP+ +VPLD+ ++ TG Sbjct: 398 KVHFQRHKDKYPHIKMNPY-PVPEHLDNVPTTSGIPY-GMSVPLDESNLIADTKSGLTGL 455
Query: 36 PLFPNLS 16 P NLS Sbjct: 456 PSATNLS 462
>tr|Q9PVN6|Q9PVN6_XENLA Xsal-3 short form OS=Xenopus laevis GN=Xsal-3 PE=4 SV=1 Length = 826
Score = 33.9 bits (76), Expect = 4.2 Identities = 22/67 (32%), Positives = 30/67 (44%) Frame = -1
Query: 216 KVVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDIKGKGSGQFTGS 37 KV + HKD Y H +P E P+ IP+ +VPLD+ ++ TG Sbjct: 398 KVHFQRHKDKYPHIKMNPY-PVPEHLDNVPTTSGIPY-GMSVPLDESNLIADTKSGLTGL 455
Query: 36 PLFPNLS 16 P NLS Sbjct: 456 PSATNLS 462
>tr|Q501Q2|Q501Q2_XENLA Putative uncharacterized protein OS=Xenopus laevis PE=2 SV=1 Length = 698
Score = 33.9 bits (76), Expect = 4.2 Identities = 22/67 (32%), Positives = 30/67 (44%) Frame = -1
Query: 216 KVVYSSHKDMYRHTPEHPKDKKKEKASKFPSMPAIPFVSNAVPLDKQDIKGKGSGQFTGS 37 KV + HKD Y H +P E P+ IP+ +VPLD+ ++ TG Sbjct: 398 KVHFQRHKDKYPHIKMNPY-PVPEHLDNVPTTSGIPY-GMSVPLDESNLIADTKSGLTGL 455
Query: 36 PLFPNLS 16 P NLS Sbjct: 456 PSATNLS 462
>tr|A7R6V8|A7R6V8_VITVI Chromosome undetermined scaffold_1440, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008427001 PE=4 SV=1 Length = 359
Score = 33.5 bits (75), Expect = 5.5 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = -1
Query: 390 WPSLGGSRPSASAALRHRFFHDSFAMPKPFPQKF 289 W LG RP+A AL+H FFH +P P P F Sbjct: 177 WDPLG--RPTAEQALKHPFFHVGKWVPHPLPDPF 208
>tr|A7R098|A7R098_VITVI Chromosome undetermined scaffold_300, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011030001 PE=4 SV=1 Length = 249
Score = 33.5 bits (75), Expect = 5.5 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = -1
Query: 390 WPSLGGSRPSASAALRHRFFHDSFAMPKPFPQKF 289 W LG RP+A AL+H FFH +P P P F Sbjct: 91 WDPLG--RPTAEQALKHPFFHVGKWVPHPLPDPF 122
>tr|A6WSV7|A6WSV7_SHEB8 Carbohydrate kinase, YjeF related protein OS=Shewanella baltica (strain OS185) GN=Shew185_3772 PE=4 SV=1 Length = 494
Score = 33.1 bits (74), Expect = 7.0 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = +3
Query: 201 LSKLPSWQHCSDIEPHPQKLATHVIILDPEISEERAWAWQTSHGKSGGVMLLKRMG 368 LS P WQ + PHP + A + EI ++R A + K GGV+LLK G Sbjct: 353 LSNEPRWQTNWVLTPHPGEAARLLGCSVAEIEQDRFAAVRVIQQKYGGVVLLKGAG 408
|