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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920409
Clone id YMU001_000136_G05
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000136_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAAGGCACTTTTCAGATGGGGTAACTTCAACTTCATGAATCAATGGAGAAGATTTTTGAT
TGAGACTGCAATCATCTTCCAATAATGAATCCCAAGATTCTGTCACTTCATGACTTGCAA
TTGGTATATCATCGTCCAACAAAGAATCAAAGAAAGCATAATTGGTCTTCGGACTCGGAA
CCTGCAGTTATGTCCTTATCTTTGTCTGGTAACGAAGGACCACTTGGAAAACTTCTTGCT
TGAAACCAACTTTGTCTTTAGCAATTGATTCGGCAGAAGTTAATGAATTAAAAAATTCAT
CAATAATAATTTCTGCATCTGCATCGGAAATCATATTCTCTTTTTAATCGACTGTATCAT
GTTGTTTGACTTGTACACGTGAGGCTTGAATCACTCGTTCGGCATGATAAAGCCCGTGGA
AAACCAATTCACGTTCATCTTTGAACAAACCGATAGTATGTCCTCGAAAGCTAATAGTTG
GATCATATTGAAATAACCAATGCTGTCCAAGA
■■Homology search results ■■ -
sp_hit_id Q8NGJ4
Definition sp|Q8NGJ4|O52E2_HUMAN Olfactory receptor 52E2 OS=Homo sapiens
Align length 57
Score (bit) 36.6
E-value 0.07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920409|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_G05.
         (512 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8NGJ4|O52E2_HUMAN Olfactory receptor 52E2 OS=Homo sapiens GN...    37   0.070
sp|Q8NGJ3|O52E1_HUMAN Olfactory receptor 52E1 OS=Homo sapiens GN...    32   2.2  
sp|O10281|Y022_NPVOP Uncharacterized 43.4 kDa protein OS=Orgyia ...    31   3.8  
sp|Q5XJY6|FANCB_MOUSE Fanconi anemia group B protein homolog OS=...    30   5.0  
sp|A6W0T5|CCME_MARMS Cytochrome c-type biogenesis protein ccmE O...    30   5.0  
sp|P18752|ZO72_XENLA Oocyte zinc finger protein XlCOF7.2 (Fragme...    30   6.5  
sp|P41427|Y022_NPVAC Uncharacterized 43.8 kDa protein in EGT-IAP...    30   8.5  
sp|Q96RD3|O52E6_HUMAN Olfactory receptor 52E6 OS=Homo sapiens GN...    30   8.5  

>sp|Q8NGJ4|O52E2_HUMAN Olfactory receptor 52E2 OS=Homo sapiens
           GN=OR52E2 PE=2 SV=1
          Length = 325

 Score = 36.6 bits (83), Expect = 0.070
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 89  IPRFCHFMTCNWYIIVQQRIKESIIGLRTRNLQLCPYLCLVTKDHL--ENFLLETNF 253
           +PR+ H +  N Y++V   +   I G+RT+ +  C    L+ +  +  E +L+ T F
Sbjct: 269 VPRYIHILLANLYVVVPPMLNPVIYGVRTKQIYKCVKKILLQEQGMEKEEYLIHTRF 325


>sp|Q8NGJ3|O52E1_HUMAN Olfactory receptor 52E1 OS=Homo sapiens
           GN=OR52E1 PE=3 SV=1
          Length = 308

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 89  IPRFCHFMTCNWYIIVQQRIKESIIGLRTRNLQ 187
           IP F H +  N+Y+++   +   I G+RT+ ++
Sbjct: 266 IPHFIHILLANFYVVIPPALNSVIYGVRTKQIR 298


>sp|O10281|Y022_NPVOP Uncharacterized 43.4 kDa protein OS=Orgyia
           pseudotsugata multicapsid polyhedrosis virus GN=ORF20
           PE=4 SV=1
          Length = 382

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 181 VPSPKTNYAFFDSLLDDDIPIASHEVTESWDSLLED 74
           +P        FD LL  ++ +A++    SWD LLED
Sbjct: 182 LPGQSGRNVLFDRLLGREVNVATNTFRRSWDELLED 217


>sp|Q5XJY6|FANCB_MOUSE Fanconi anemia group B protein homolog OS=Mus
           musculus GN=Fancb PE=2 SV=2
          Length = 703

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -2

Query: 181 VPSPKTNYAFFDSLLDDDIPIASHEVTESWDSLLEDDCSLNQKSSPLIHEVEVTPS 14
           VP+P+ N       L D+ P   H V ++W  +L+DD  +  K + L    E+T S
Sbjct: 451 VPTPEEN-------LPDNFPEPEHIVEQTWCHVLDDDLVVGAKVTSLKESNEMTLS 499


>sp|A6W0T5|CCME_MARMS Cytochrome c-type biogenesis protein ccmE
           OS=Marinomonas sp. (strain MWYL1) GN=ccmE PE=3 SV=1
          Length = 155

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -2

Query: 493 FQYDPTISFRGHTIGLFKDERELVFHGLYHAERVIQASRVQVKQHD 356
           FQY  TI +RG    LF++ + +V  G  + + V +A+ V  K HD
Sbjct: 81  FQYKVTIEYRGILPDLFREGQGIVAQGKLNNDGVFEATEVLAK-HD 125


>sp|P18752|ZO72_XENLA Oocyte zinc finger protein XlCOF7.2 (Fragment)
           OS=Xenopus laevis PE=2 SV=1
          Length = 391

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -2

Query: 178 PSPKTNYAFFDSLLDDDIPIASHEVTESWDSLLEDDCSLNQKSSPLIHEVEVT 20
           P+P   Y   +SLL++ I  A  E T S + + + +CS+N    PL  +++ T
Sbjct: 151 PTPIMGYRMNNSLLENYISNAIKEETASCEEINQSNCSIN----PLTEQIQGT 199


>sp|P41427|Y022_NPVAC Uncharacterized 43.8 kDa protein in EGT-IAP1
           intergenic region OS=Autographa californica nuclear
           polyhedrosis virus PE=4 SV=1
          Length = 382

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 181 VPSPKTNYAFFDSLLDDDIPIASHEVTESWDSLLED 74
           +P        FD LL  ++ + ++    SWD LLED
Sbjct: 182 MPGQSDRNVLFDRLLGREVNVTTNTFRRSWDELLED 217


>sp|Q96RD3|O52E6_HUMAN Olfactory receptor 52E6 OS=Homo sapiens
           GN=OR52E6 PE=2 SV=2
          Length = 313

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +2

Query: 89  IPRFCHFMTCNWYIIVQQRIKESIIGLRTRNLQLCPYLCLVTKDH 223
           IP++ H    N Y++V   +   I G+RT++++          DH
Sbjct: 269 IPQYIHIFLANLYVVVPPTLNPVIYGVRTKHIRETVLRIFFKTDH 313
tr_hit_id A9SGL7
Definition tr|A9SGL7|A9SGL7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 28
Score (bit) 33.5
E-value 6.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920409|Adiantum capillus-veneris mRNA, clone:
YMU001_000136_G05.
         (512 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SGL7|A9SGL7_PHYPA Predicted protein OS=Physcomitrella paten...    33   6.2  
tr|B3RFA2|B3RFA2_SORAR Olfactory receptor 52R1 (Predicted) OS=So...    33   8.1  

>tr|A9SGL7|A9SGL7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_229542 PE=4 SV=1
          Length = 301

 Score = 33.5 bits (75), Expect = 6.2
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 511 LGQHWLFQYDPTISFRGHTIGLFKDERE 428
           LGQ WLF  DP ISFR H + +  +E +
Sbjct: 176 LGQQWLFAKDPKISFRKHIVEIDHNESQ 203


>tr|B3RFA2|B3RFA2_SORAR Olfactory receptor 52R1 (Predicted) OS=Sorex
           araneus GN=OR52R1 PE=4 SV=1
          Length = 315

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +2

Query: 89  IPRFCHFMTCNWYIIVQQRIKESIIGLRTRNLQLCPYLCLVTKDH 223
           IPR  H +  N Y++V   +   I G+RT+ ++ C     + K++
Sbjct: 271 IPRHTHILLANMYLLVPPMLNPIIYGVRTKQIRECVLQLFIAKNN 315