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BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920432|Adiantum capillus-veneris mRNA, clone: YMU001_000137_A06. (513 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2QKB5|Q2QKB5_WHEAT U2AF small subunit OS=Triticum aestivum P... 48 3e-04 tr|A9TES1|A9TES1_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.014 tr|A9NVR9|A9NVR9_PICSI Putative uncharacterized protein OS=Picea... 40 0.068 tr|A9RKV0|A9RKV0_PHYPA Predicted protein (Fragment) OS=Physcomit... 39 0.20 tr|A7PPK3|A7PPK3_VITVI Chromosome chr8 scaffold_23, whole genome... 39 0.20 tr|B8LNG3|B8LNG3_PICSI Putative uncharacterized protein OS=Picea... 38 0.26 tr|Q9S709|Q9S709_ARATH T22C5.10 (At1g27650/T22C5_2) (Putative U2... 38 0.34 tr|Q945S1|Q945S1_ARATH U2 auxiliary factor small subunit OS=Arab... 38 0.34 tr|B6T7D3|B6T7D3_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze... 38 0.34 tr|B4FQ72|B4FQ72_MAIZE Putative uncharacterized protein OS=Zea m... 38 0.34 tr|A8MRI1|A8MRI1_ARATH Uncharacterized protein At1g27650.2 OS=Ar... 38 0.34 tr|B7E7L8|B7E7L8_ORYSJ cDNA clone:001-044-E06, full insert seque... 35 2.2 tr|B6TX31|B6TX31_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.2 tr|B6T3Q5|B6T3Q5_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze... 35 2.2 tr|A2Z2M2|A2Z2M2_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.2 tr|B6TRJ7|B6TRJ7_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze... 35 2.9 tr|B6TCE1|B6TCE1_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze... 35 2.9 tr|B6SY08|B6SY08_MAIZE Splicing factor U2af 38 kDa subunit OS=Ze... 35 2.9 tr|B4FAF4|B4FAF4_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.9 tr|Q5XH71|Q5XH71_XENLA LOC495052 protein OS=Xenopus laevis GN=LO... 34 3.7 tr|B7EHH7|B7EHH7_ORYSJ cDNA clone:001-039-A01, full insert seque... 34 3.7 tr|Q4X2I8|Q4X2I8_PLACH U2 snRNP auxiliary factor, small subunit,... 34 3.7 tr|Q5U5C1|Q5U5C1_XENLA LOC495304 protein OS=Xenopus laevis GN=LO... 34 4.8 tr|Q9FMY5|Q9FMY5_ARATH U2 snRNP auxiliary factor, small subunit ... 34 4.9 tr|Q945S0|Q945S0_ARATH U2 auxiliary factor small subunit OS=Arab... 34 4.9 tr|A7QPI3|A7QPI3_VITVI Chromosome chr18 scaffold_137, whole geno... 34 4.9 tr|B7FFR4|B7FFR4_MEDTR Putative uncharacterized protein (Fragmen... 33 6.4 tr|Q6PBC7|Q6PBC7_XENTR Inhibitor of growth family, member 5 OS=X... 33 8.1 tr|O36421|O36421_9GAMA Putative immediate early protein OS=Alcel... 33 8.1 tr|B8CV00|B8CV00_9GAMM Putative uncharacterized protein OS=Shewa... 33 8.1
>tr|Q2QKB5|Q2QKB5_WHEAT U2AF small subunit OS=Triticum aestivum PE=2 SV=1 Length = 314
Score = 48.1 bits (113), Expect = 3e-04 Identities = 29/58 (50%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = -1
Query: 489 GDYDDWRSHSRGS---NRGYXXXXXXXXXXXXXXXXXXREGSAGRRAKIEQWNREREA 325 GDY D+ HSR S NR Y REGS RRAKIEQWNREREA Sbjct: 232 GDYGDYYHHSRRSSERNRNYDSDGSRCRRHRSRTRSPVREGSEERRAKIEQWNREREA 289
Score = 33.9 bits (76), Expect = 4.9 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -1
Query: 381 EGSAGRRAKIEQWNRERE 328 +GS RRAKI+QWNRERE Sbjct: 293 QGSEERRAKIDQWNRERE 310
>tr|A9TES1|A9TES1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_194373 PE=4 SV=1 Length = 304
Score = 42.4 bits (98), Expect = 0.014 Identities = 19/24 (79%), Positives = 20/24 (83%) Frame = -1
Query: 381 EGSAGRRAKIEQWNREREARHSGE 310 EGSA RRAKIEQWNRERE R + E Sbjct: 263 EGSAERRAKIEQWNREREVRQAAE 286
>tr|A9NVR9|A9NVR9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 312
Score = 40.0 bits (92), Expect = 0.068 Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 11/43 (25%) Frame = -1
Query: 381 EGSAGRRAKIEQWNREREARHS-----------GEYEDANGRY 286 EGSA RRAKIEQWNRE+EA+ S G Y + G Y Sbjct: 268 EGSAERRAKIEQWNREKEAQASSTIANHPMQNGGAYSNPQGYY 310
>tr|A9RKV0|A9RKV0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_25638 PE=4 SV=1 Length = 283
Score = 38.5 bits (88), Expect = 0.20 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = -1
Query: 381 EGSAGRRAKIEQWNREREAR 322 EGSA RRAKI+QWNRERE R Sbjct: 263 EGSAERRAKIDQWNREREER 282
>tr|A7PPK3|A7PPK3_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021681001 PE=4 SV=1 Length = 317
Score = 38.5 bits (88), Expect = 0.20 Identities = 18/27 (66%), Positives = 19/27 (70%) Frame = -1
Query: 381 EGSAGRRAKIEQWNREREARHSGEYED 301 EGSA RRAKIEQWNRERE + D Sbjct: 250 EGSAERRAKIEQWNREREQAEATNKND 276
>tr|B8LNG3|B8LNG3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 344
Score = 38.1 bits (87), Expect = 0.26 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = -1
Query: 381 EGSAGRRAKIEQWNRERE 328 EGSA RRAKIEQWNRERE Sbjct: 296 EGSAERRAKIEQWNRERE 313
>tr|Q9S709|Q9S709_ARATH T22C5.10 (At1g27650/T22C5_2) (Putative U2 snRNP auxiliary factor protein) (T17H3.14 protein) OS=Arabidopsis thaliana GN=T17H3.14 PE=2 SV=1 Length = 296
Score = 37.7 bits (86), Expect = 0.34 Identities = 16/23 (69%), Positives = 18/23 (78%) Frame = -1
Query: 381 EGSAGRRAKIEQWNREREARHSG 313 EGS RRA+IEQWNRERE + G Sbjct: 272 EGSEERRARIEQWNREREEKEEG 294
>tr|Q945S1|Q945S1_ARATH U2 auxiliary factor small subunit OS=Arabidopsis thaliana GN=AUSA PE=2 SV=1 Length = 296
Score = 37.7 bits (86), Expect = 0.34 Identities = 16/23 (69%), Positives = 18/23 (78%) Frame = -1
Query: 381 EGSAGRRAKIEQWNREREARHSG 313 EGS RRA+IEQWNRERE + G Sbjct: 272 EGSEERRARIEQWNREREEKEEG 294
>tr|B6T7D3|B6T7D3_MAIZE Splicing factor U2af 38 kDa subunit OS=Zea mays PE=2 SV=1 Length = 284
Score = 37.7 bits (86), Expect = 0.34 Identities = 17/19 (89%), Positives = 17/19 (89%) Frame = -1
Query: 381 EGSAGRRAKIEQWNREREA 325 EGS RRAKIEQWNREREA Sbjct: 263 EGSEERRAKIEQWNREREA 281
>tr|B4FQ72|B4FQ72_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 287
Score = 37.7 bits (86), Expect = 0.34 Identities = 17/19 (89%), Positives = 17/19 (89%) Frame = -1
Query: 381 EGSAGRRAKIEQWNREREA 325 EGS RRAKIEQWNREREA Sbjct: 266 EGSEERRAKIEQWNREREA 284
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