BP920438
Clone id YMU001_000137_B01
Library
Length 390
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGTTTATCTTAGCCTAACAAAATCTCACATTCTTCTCCAATGATGAAGCTTCCATGCAA
CTGTCTCTAGCTGTTCAAAGCATTGCCTACACATTATTACACATAGTGATAACGTTTGCT
CTCGCGGCGGGAGTATCCACTTGTGTTCAAAATGGATGAGACTAAACATACATAAGAAAA
TTGAGCGATAAAATACGCCTTTCTCCTCAACGAGGTGACAACAATGAGGACTCATTATCT
AACTCTTCCTCATCCTGTGAATCACCAAAAGCAAGTAGCTCCTCGGAGCAGGATAATAAT
GGGTGCACTCCAGACGAGAACCCCTCACACATTCGATGCACAATCAATCTCATGTTTGGG
CGAAGCTCGCGCTCCTCAATGACATAATCC
■■Homology search results ■■ -
sp_hit_id Q8TYD4
Definition sp|Q8TYD4|MTAD_METKA 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanopyrus kandleri
Align length 40
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920438|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_B01.
(372 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8TYD4|MTAD_METKA 5-methylthioadenosine/S-adenosylhomocystein... 29 6.4

>sp|Q8TYD4|MTAD_METKA 5-methylthioadenosine/S-adenosylhomocysteine
deaminase OS=Methanopyrus kandleri GN=mtaD PE=3 SV=1
Length = 431

Score = 29.3 bits (64), Expect = 6.4
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = -2

Query: 356 ERELRPNMRLIVHRMCEG------FSSGVHPLLSCSEELL 255
E EL+ + R V+R C+G FS G H +CSEELL
Sbjct: 158 EEELKESKR--VYRKCQGMEGLIEFSLGPHAPYTCSEELL 195


tr_hit_id Q898C4
Definition tr|Q898C4|Q898C4_CLOTE Phosphoglycerol transferase OS=Clostridium tetani
Align length 35
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920438|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_B01.
(372 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q898C4|Q898C4_CLOTE Phosphoglycerol transferase OS=Clostridiu... 35 1.9

>tr|Q898C4|Q898C4_CLOTE Phosphoglycerol transferase OS=Clostridium
tetani GN=CTC_00539 PE=4 SV=1
Length = 460

Score = 35.0 bits (79), Expect = 1.9
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = -3

Query: 178 VFYRSIFLCMFSLIHFEHKWILPPREQTLSLCVIM 74
VF+ IF+ +F LI ++ +ILP ++ LS+C+++
Sbjct: 152 VFFLDIFVIVFILIKYKRDFILPKKQVALSICILL 186