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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920442
Clone id YMU001_000137_B07
Library
Length 467
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGGATAGTAATGCTCCCACTTTGATAGAACCTCGATGCTTGCAAGCACTGGCGTCTGCT
GGGGATTCACTGCTTTGATCAGGGCTAAATCGTCATGAGACCAAGAGTGACAAATTTCCA
GCATCATACTCCAGACAACCGTGATTTGTGTTGGGGGGAACCACCCTAATGCGAAGTAAT
CCATTGGCATTCTTTTTCCTTTTTTTTGTCTTCTCTCCTGCTCCATGATCTTCGGTCACA
TGAAAGGCCGTAACCGCGTATCCCTCTTTTCCAACAAGCACACAGTTTCCGTGCTGCACT
TCAGTGTTTTGAAACTCCACTTCAACTTTTCCAACATATTGGGAAGCCTTCTTGTAGATG
TTTCTATCTTGTGGATCTGCATGAAAGCTTCTTAAAGCATATGTCAGCTTTAAGAGGTCA
ACAGGCTTGAGGGGATTGGGAGACAGGCCCTTCAAATCCTCCTCTGA
■■Homology search results ■■ -
sp_hit_id P43633
Definition sp|P43633|ALK1_YEAST Serine/threonine-protein kinase Haspin homolog ALK1 OS=Saccharomyces cerevisiae
Align length 128
Score (bit) 33.1
E-value 0.62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920442|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_B07.
         (467 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P43633|ALK1_YEAST Serine/threonine-protein kinase Haspin homo...    33   0.62 
sp|Q28I47|S38A8_XENTR Putative sodium-coupled neutral amino acid...    30   5.2  
sp|A7HZ64|MUTS_PARL1 DNA mismatch repair protein mutS OS=Parviba...    30   6.8  
sp|Q9PL97|DEGP_CHLMU Probable serine protease do-like OS=Chlamyd...    29   8.9  

>sp|P43633|ALK1_YEAST Serine/threonine-protein kinase Haspin homolog
           ALK1 OS=Saccharomyces cerevisiae GN=ALK1 PE=1 SV=2
          Length = 760

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
 Frame = -1

Query: 443 SPNPLKPVDLLKLTYALRSFHADPQDRNIYKKASQYVGKVEVEFQNTEVQHGNCVLVGKE 264
           S  P++P +++K   +   FH      N Y ++S  +  +E+  +N        + V K+
Sbjct: 303 SMTPVEPRNMVKHKTSFSDFHKTIFSSNTYSESSDTISSMEITLKNKASSSSLSLNVLKK 362

Query: 263 GYAVTAFHVTEDHGAGEKTKKRKKNANGLLRIRVVPPNTNHGCLEYDAGNLSLLVS*RFS 84
             + ++      H + +K  KR K  + ++       ++N     Y + N +L  S R S
Sbjct: 363 RNSQSSLKHKSSHASLQKF-KRNKGKSSMIAPSTATNSSNDDSCSYSSKNSTL--SHRIS 419

Query: 83  ---PDQSS 69
              PDQ S
Sbjct: 420 LPVPDQVS 427


>sp|Q28I47|S38A8_XENTR Putative sodium-coupled neutral amino acid
           transporter 8 OS=Xenopus tropicalis GN=slc38a8 PE=2 SV=1
          Length = 440

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +3

Query: 189 ILFPFFCLLSCSMIFGHMKGRNRVSLFSNKHTVSVLHFSVLKLHFNFSNILGSL 350
           I F F C  +C  I+  MK +      SN   VSV+   +  L ++F+ I GSL
Sbjct: 230 ICFGFQCHEACVTIYSSMKNK----CLSNWAAVSVVSMLICLLIYSFTGIYGSL 279


>sp|A7HZ64|MUTS_PARL1 DNA mismatch repair protein mutS
           OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023
           / NCIMB 13966) GN=mutS PE=3 SV=1
          Length = 908

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 467 SEEDLKGLSPNPLKPVDLLKLTYALRSFHA 378
           +EE+LK L+P+ L P   L+L Y L++  A
Sbjct: 875 AEEELKNLNPDELSPKQALELLYKLKALAA 904


>sp|Q9PL97|DEGP_CHLMU Probable serine protease do-like OS=Chlamydia
           muridarum GN=degP PE=3 SV=1
          Length = 497

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/70 (28%), Positives = 30/70 (42%)
 Frame = -1

Query: 311 QNTEVQHGNCVLVGKEGYAVTAFHVTEDHGAGEKTKKRKKNANGLLRIRVVPPNTNHGCL 132
           Q  +   G   +V ++GY VT  HV ED G    T    +      +I  + P T+   +
Sbjct: 120 QQRDAVRGTGFIVSEDGYVVTNHHVVEDAGKIHVTLHDGQKYTA--KIIGLDPKTDLAVI 177

Query: 131 EYDAGNLSLL 102
           +  A NL  L
Sbjct: 178 KIQAKNLPFL 187
tr_hit_id A4Y796
Definition tr|A4Y796|A4Y796_SHEPC Putative uncharacterized protein OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Align length 63
Score (bit) 36.6
E-value 0.65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920442|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_B07.
         (467 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4Y796|A4Y796_SHEPC Putative uncharacterized protein OS=Shewa...    37   0.65 
tr|A1RJ94|A1RJ94_SHESW Putative uncharacterized protein OS=Shewa...    37   0.65 
tr|A2V0N5|A2V0N5_SHEPU Putative uncharacterized protein OS=Shewa...    37   0.65 
tr|Q4UDL9|Q4UDL9_THEAN 5'-3' exoribonuclease 2, putative OS=Thei...    37   0.65 
tr|Q4N5X7|Q4N5X7_THEPA Putative uncharacterized protein OS=Theil...    37   0.65 
tr|B3N653|B3N653_DROER GG24178 OS=Drosophila erecta GN=GG24178 P...    36   0.85 
tr|A1CTG1|A1CTG1_ASPCL Smr domain protein OS=Aspergillus clavatu...    36   0.85 
tr|A7HLS4|A7HLS4_FERNB Protease Do OS=Fervidobacterium nodosum (...    34   3.2  
tr|B2JKA0|B2JKA0_BURP8 TIM-barrel protein, yjbN family OS=Burkho...    34   4.2  
tr|B1D9C1|B1D9C1_9BACL Cold shock protein OS=Paenibacillus sp. J...    33   5.5  
tr|Q71ED3|Q71ED3_AGRVI B-1-2 glucan synthetase OS=Agrobacterium ...    33   7.2  
tr|Q10MB8|Q10MB8_ORYSJ Retrotransposon protein, putative, Ty3-gy...    33   9.4  

>tr|A4Y796|A4Y796_SHEPC Putative uncharacterized protein
           OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
           GN=Sputcn32_2108 PE=4 SV=1
          Length = 354

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -2

Query: 190 MPMDYFALGWFPPTQITVVWSMMLEICHSWSHDDLALIKAVNPQQTPVLASIEVLSKWEH 11
           +P ++   G   P ++T+     L +C +WS+ DLA+   V P+  P+   +++L++ EH
Sbjct: 135 VPFEHGKRGIVRPGRLTIESCYPLGLCRTWSYVDLAITHIVYPK--PIETPLQLLARLEH 192

Query: 10  YYP 2
             P
Sbjct: 193 TEP 195


>tr|A1RJ94|A1RJ94_SHESW Putative uncharacterized protein
           OS=Shewanella sp. (strain W3-18-1) GN=Sputw3181_1904
           PE=4 SV=1
          Length = 354

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -2

Query: 190 MPMDYFALGWFPPTQITVVWSMMLEICHSWSHDDLALIKAVNPQQTPVLASIEVLSKWEH 11
           +P ++   G   P ++T+     L +C +WS+ DLA+   V P+  P+   +++L++ EH
Sbjct: 135 VPFEHGKRGIVRPGRLTIESCYPLGLCRTWSYVDLAITHIVYPK--PIETPLQLLARLEH 192

Query: 10  YYP 2
             P
Sbjct: 193 TEP 195


>tr|A2V0N5|A2V0N5_SHEPU Putative uncharacterized protein
           OS=Shewanella putrefaciens 200 GN=Sput200DRAFT_2959 PE=4
           SV=1
          Length = 354

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -2

Query: 190 MPMDYFALGWFPPTQITVVWSMMLEICHSWSHDDLALIKAVNPQQTPVLASIEVLSKWEH 11
           +P ++   G   P ++T+     L +C +WS+ DLA+   V P+  P+   +++L++ EH
Sbjct: 135 VPFEHGKRGIVRPGRLTIESCYPLGLCRTWSYVDLAITHIVYPK--PIETPLQLLARLEH 192

Query: 10  YYP 2
             P
Sbjct: 193 TEP 195


>tr|Q4UDL9|Q4UDL9_THEAN 5'-3' exoribonuclease 2, putative
           OS=Theileria annulata GN=TA11675 PE=4 SV=1
          Length = 1467

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 198 PFFCLLSCSMIFGHMKGRNRVSLFSNKHTVSVLHFSVLK 314
           P+ CLL   ++FGHMK  +++ +  N +   +LH  +L+
Sbjct: 274 PYICLLREQVVFGHMKNSSKMRMMVNMNNYILLHIGILR 312


>tr|Q4N5X7|Q4N5X7_THEPA Putative uncharacterized protein
           OS=Theileria parva GN=TP02_0165 PE=4 SV=1
          Length = 1726

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +3

Query: 198 PFFCLLSCSMIFGHMKGRNRVSLFSNKHTVSVLHFSVLK 314
           P+ CLL   ++FGHMK  +++ +  N ++  +LH  +L+
Sbjct: 346 PYICLLREQVVFGHMKNSSKLRMMVNMNSYILLHVGILR 384


>tr|B3N653|B3N653_DROER GG24178 OS=Drosophila erecta GN=GG24178 PE=4
           SV=1
          Length = 318

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
 Frame = -2

Query: 364 ETSTRRLPNMLEKLKWSFKTLKCSTETVCLLEKRDTRLRPFM*PKIMEQERRQKKGKRMP 185
           ETS    P    K     KT K  TE  CLLE +   +      K+  + RR+++ +R  
Sbjct: 8   ETSGAPSPPKSRKTCCVQKTAKTQTEKTCLLEMKGKLMEMLGKKKVSRRRRRRRRWRRSC 67

Query: 184 MDYFALGW-FPPTQITVVWSMMLEICHSWSHDDLALIKAVNP 62
           +D  + GW +    I +V +  + I  S   D + LI  + P
Sbjct: 68  LDN-STGWGYYVIAIAIVIAFAIAIAESGGMDFVFLISPLVP 108


>tr|A1CTG1|A1CTG1_ASPCL Smr domain protein OS=Aspergillus clavatus
           GN=ACLA_082900 PE=4 SV=1
          Length = 557

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
 Frame = -1

Query: 467 SEEDLKGLSPNPLKPVDLLKLTYALRSFHADPQDRNIYKKASQYVGKVEVEFQNTEVQHG 288
           SEED  G        VD   + + LR    D        +A   +  V    +   ++ G
Sbjct: 143 SEEDKIGYLSEMFPSVDRFTIQHTLRKSDGDVD------RAMDVLLNVAFFDEQPTIEDG 196

Query: 287 NCVLV--GKEGYAVTAFHVTEDHGAGEKTKKRKKNANGLLRIRVVPPNTNHGCLEYDAGN 114
             V +  G +G+  +++   ED G  +  K++ KN NG   +  V PN   GC E    N
Sbjct: 197 TKVAIPKGVDGFGESSY---EDPGRKKNRKRKGKNKNGSAGLSSVLPNNPSGCNENSTTN 253


>tr|A7HLS4|A7HLS4_FERNB Protease Do OS=Fervidobacterium nodosum
           (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1007
           PE=4 SV=1
          Length = 453

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -1

Query: 383 HADPQDRNIYKKASQYVGKVEVEFQNTEVQHGNCVLVGKEGYAVTAFHVTE 231
           + DP  R  YK   Q+ G +  +F+ ++   G+  ++ KEGY VT +HV E
Sbjct: 54  YIDPFIREFYK---QFFGDIPRQFEESD-SVGSGFIISKEGYIVTNYHVVE 100


>tr|B2JKA0|B2JKA0_BURP8 TIM-barrel protein, yjbN family
           OS=Burkholderia phymatum (strain DSM 17167 / STM815)
           GN=Bphy_1641 PE=4 SV=1
          Length = 333

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 23/66 (34%), Positives = 33/66 (50%)
 Frame = -1

Query: 455 LKGLSPNPLKPVDLLKLTYALRSFHADPQDRNIYKKASQYVGKVEVEFQNTEVQHGNCVL 276
           LKGLSP   + +  LK  YA R     PQ   I     + + +VE     T +QH + V+
Sbjct: 176 LKGLSPKENREIPPLKYDYAYRLKRDFPQLEIIINGGIKTLDEVE-----THLQHVDGVM 230

Query: 275 VGKEGY 258
           +G+E Y
Sbjct: 231 LGREAY 236


>tr|B1D9C1|B1D9C1_9BACL Cold shock protein OS=Paenibacillus sp.
           JDR-2 GN=Pjdr2DRAFT_1609 PE=4 SV=1
          Length = 69

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 154 PTQITVVWSMMLEICHSWSHDDLALIKA 71
           PT++TVVWS   E C  W  D+ +L +A
Sbjct: 13  PTELTVVWSCSSEQCKGWMRDNFSLSEA 40