BP920448
Clone id YMU001_000137_C01
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTCCGGGATGAGGATAGGGGCACATCAATGAAGCGCAAAAGGGCAGTACCATATGATGC
TAGCACTATCTATGGATTGCAGAAAAAGAGGCGAAGGGGACGATGTGCAACTACTTTGCC
TCTTGGTGTTGGTGTGCATGGCTTTTCGGCAAATGTAAATAATACAAGAGTAGAGCCTAT
GGGCTACCAAAGTGATTGTGATTCATCCTCTTCTGTCATTTTAGACACAGATGAGGTTTC
CCCTCTCGAACTTTATGAAGATCCATTGTGTCGAAGACCATTTTTGGATCTTAACCTTCC
TCCCCCTGATGAGGATACAGAAGATGTTAAGCTAACACTCTTTTTGTAGTTGTGGTTTGC
CTTGACGTTTCTTCCAGTGCTTTGTTCCTTGTCATCTAGTATGGCATGTGGAACCTTGTT
ATGGCTTTCAAAGTGATCCTACTATTGCACAGATGATACTTGTAACTCGGGCATATGTTC
AAAATGAATCATGTCTTTGAGATTGAGTGTAATCAAGTT
■■Homology search results ■■ -
sp_hit_id O80339
Definition sp|O80339|ERF82_ARATH Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana
Align length 48
Score (bit) 37.7
E-value 0.032
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920448|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_C01.
(519 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O80339|ERF82_ARATH Ethylene-responsive transcription factor 3... 38 0.032
sp|Q9LDE4|ERF83_ARATH Ethylene-responsive transcription factor 7... 37 0.042
sp|Q9SXS8|ERF3_TOBAC Ethylene-responsive transcription factor 3 ... 35 0.21
sp|Q3TI53|SCHI1_MOUSE Schwannomin-interacting protein 1 OS=Mus m... 32 1.8
sp|Q9P0W5|SCHI1_HUMAN Schwannomin-interacting protein 1 OS=Homo ... 32 1.8
sp|Q13018|PLA2R_HUMAN Secretory phospholipase A2 receptor OS=Hom... 31 4.0
sp|P47245|NRDC_RAT Nardilysin OS=Rattus norvegicus GN=Nrd1 PE=2 ... 31 4.0
sp|Q8BHG1|NRDC_MOUSE Nardilysin OS=Mus musculus GN=Nrd1 PE=2 SV=1 31 4.0
sp|Q5R880|PLA2R_PONAB Secretory phospholipase A2 receptor OS=Pon... 30 5.2
sp|Q9ULF5|S39AA_HUMAN Zinc transporter ZIP10 OS=Homo sapiens GN=... 30 6.9
sp|Q60AY5|AROC_METCA Chorismate synthase OS=Methylococcus capsul... 30 8.8

>sp|O80339|ERF82_ARATH Ethylene-responsive transcription factor 3
OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1
Length = 225

Score = 37.7 bits (86), Expect = 0.032
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2

Query: 170 VEPMGYQSDCDSSSSVILDTDEVSPLELYEDPLCRRPF-LDLNLPPPD 310
V P SDCDSSSSVI D D+++ +P PF DLN PP D
Sbjct: 164 VVPEDCHSDCDSSSSVIDDDDDIASSSRRRNP----PFQFDLNFPPLD 207


>sp|Q9LDE4|ERF83_ARATH Ethylene-responsive transcription factor 7
OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1
Length = 244

Score = 37.4 bits (85), Expect = 0.042
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2

Query: 59 ASTIYGLQKKRRRGRCATTLPLGVGVHGFSANVNNTRVEPMGYQSDCDSSSSVILDTDEV 238
+ST+ R A + + +H V P SDCDSSSSVI D D++
Sbjct: 145 SSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPRTPPVAPEDCHSDCDSSSSVIDDGDDI 204

Query: 239 SPLELYEDPLCRRPF-LDLNLPPPD 310
+ + PF DLN PP D
Sbjct: 205 AS----SSSRRKTPFQFDLNFPPLD 225


>sp|Q9SXS8|ERF3_TOBAC Ethylene-responsive transcription factor 3
OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1
Length = 225

Score = 35.0 bits (79), Expect = 0.21
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +2

Query: 170 VEPMGYQSDCDSSSSVILDTDEVSPLELYEDPLC----RRPFL-DLNLPPPDED 316
V P SDCDSSSSV+ D + D + R+P L DLNLPPP +D
Sbjct: 159 VVPDDCHSDCDSSSSVVDHGDCEKENDNDNDNIASSSFRKPLLFDLNLPPPMDD 212


>sp|Q3TI53|SCHI1_MOUSE Schwannomin-interacting protein 1 OS=Mus
musculus GN=Schip1 PE=1 SV=1
Length = 456

Score = 32.0 bits (71), Expect = 1.8
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2

Query: 146 SANVNNTRVEPMGYQSDCDSSSSVILDTDEVSPLELYED--PLCRRPFLDLNLPPPDEDT 319
S+ N+T+V P S+C SSSS D VS LE YE+ P+ ++ +D P D +
Sbjct: 16 SSQSNSTKVTPC---SECKSSSSPGGSLDLVSALEDYEEPFPVYQKKVIDEWAPEEDGEE 72

Query: 320 ED 325
E+
Sbjct: 73 EE 74


>sp|Q9P0W5|SCHI1_HUMAN Schwannomin-interacting protein 1 OS=Homo
sapiens GN=SCHIP1 PE=1 SV=1
Length = 487

Score = 32.0 bits (71), Expect = 1.8
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2

Query: 146 SANVNNTRVEPMGYQSDCDSSSSVILDTDEVSPLELYED--PLCRRPFLDLNLPPPDEDT 319
S+ N+T+V P S+C SSSS D VS LE YE+ P+ ++ +D P D +
Sbjct: 44 SSQSNSTKVTPC---SECKSSSSPGGSLDLVSALEDYEEPFPVYQKKVIDEWAPEEDGEE 100

Query: 320 ED 325
E+
Sbjct: 101 EE 102


>sp|Q13018|PLA2R_HUMAN Secretory phospholipase A2 receptor OS=Homo
sapiens GN=PLA2R1 PE=1 SV=2
Length = 1463

Score = 30.8 bits (68), Expect = 4.0
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
Frame = -3

Query: 163 IIYICRKAMHTNTKRQSSCTSS---------PSPLFLQSIDSASIIWYCPFAL 32
+ YIC+KA H + +S C L+S D AS +YCP AL
Sbjct: 497 LFYICKKAGHVLSDAESGCQEGWERHGGFCYKIDTVLRSFDQASSGYYCPPAL 549


>sp|P47245|NRDC_RAT Nardilysin OS=Rattus norvegicus GN=Nrd1 PE=2
SV=1
Length = 1161

Score = 30.8 bits (68), Expect = 4.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1

Query: 64 HYL-WIAEKEAKGTMCNYFASWCWCAWLFG 150
HY+ W+ E KG++ +Y CW LFG
Sbjct: 470 HYISWLVGHEGKGSILSYLRKKCWALALFG 499


>sp|Q8BHG1|NRDC_MOUSE Nardilysin OS=Mus musculus GN=Nrd1 PE=2 SV=1
Length = 1161

Score = 30.8 bits (68), Expect = 4.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1

Query: 64 HYL-WIAEKEAKGTMCNYFASWCWCAWLFG 150
HY+ W+ E KG++ +Y CW LFG
Sbjct: 470 HYISWLVGHEGKGSILSYLRKKCWALALFG 499


>sp|Q5R880|PLA2R_PONAB Secretory phospholipase A2 receptor OS=Pongo
abelii GN=PLA2R1 PE=2 SV=2
Length = 1464

Score = 30.4 bits (67), Expect = 5.2
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
Frame = -3

Query: 163 IIYICRKAMHTNTKRQSSCTSS---------PSPLFLQSIDSASIIWYCPFAL 32
+ Y+C+KA H + +S C L+S D AS +YCP AL
Sbjct: 499 LFYVCKKAGHVLSDAESGCQEGWERHGGFCYKIDTVLRSFDQASSGYYCPPAL 551


>sp|Q9ULF5|S39AA_HUMAN Zinc transporter ZIP10 OS=Homo sapiens
GN=SLC39A10 PE=1 SV=2
Length = 831

Score = 30.0 bits (66), Expect = 6.9
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -1

Query: 516 LITLNLKDMIHFEHMPELQVSSVQ**DHFESHN-KVPHAILDDKEQS-TGRNVKANH 352
++ +N +D+ H +H+ L + +VQ HF SHN + H L+ + Q+ T + K NH
Sbjct: 96 VVEINHEDLGH-DHVSHLDILAVQEGKHFHSHNHQHSHNHLNSENQTVTSVSTKRNH 151


tr_hit_id A9PES8
Definition tr|A9PES8|A9PES8_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 49
Score (bit) 40.4
E-value 0.053
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920448|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_C01.
(519 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9PES8|A9PES8_POPTR Putative uncharacterized protein OS=Popul... 40 0.053
tr|A7PXA1|A7PXA1_VITVI Chromosome chr12 scaffold_36, whole genom... 37 0.77
tr|Q7XR67|Q7XR67_ORYSJ Os04g0669200 protein OS=Oryza sativa subs... 35 1.7
tr|Q259P7|Q259P7_ORYSA H0818H01.4 protein (B0811B10.20 protein) ... 35 1.7
tr|A2XYS1|A2XYS1_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.7
tr|Q2QDF5|Q2QDF5_GOSHI Ethylene-responsive element-binding facto... 35 2.2
tr|A9SW67|A9SW67_PHYPA Predicted protein OS=Physcomitrella paten... 35 2.2
tr|B6SZ49|B6SZ49_MAIZE Ethylene-responsive transcription factor ... 35 2.9
tr|B6QSX5|B6QSX5_PENMA Ankyrin repeat-containing protein, putati... 35 2.9
tr|Q5MJ54|Q5MJ54_PEA AT-rich element binding factor 2 OS=Pisum s... 34 3.8
tr|B7ZYT2|B7ZYT2_MAIZE Putative uncharacterized protein OS=Zea m... 33 6.5
tr|Q9VTH5|Q9VTH5_DROME CG6175 OS=Drosophila melanogaster GN=CG61... 33 8.5
tr|Q8MS46|Q8MS46_DROME RE07996p OS=Drosophila melanogaster GN=CG... 33 8.5
tr|B6K8R5|B6K8R5_TOXGO Putative uncharacterized protein OS=Toxop... 33 8.5

>tr|A9PES8|A9PES8_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 219

Score = 40.4 bits (93), Expect = 0.053
Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2

Query: 170 VEPMGYQSDCDSSSSVILDTDEVSPLELYEDPLCRRPF-LDLNLPPPDE 313
V P SDCDSSSSV+ D D S LCR+P DLN PP D+
Sbjct: 159 VVPEDCHSDCDSSSSVVDDRDVASA----ASSLCRKPLPFDLNFPPLDQ 203


>tr|A7PXA1|A7PXA1_VITVI Chromosome chr12 scaffold_36, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025959001
PE=4 SV=1
Length = 195

Score = 36.6 bits (83), Expect = 0.77
Identities = 24/46 (52%), Positives = 27/46 (58%)
Frame = +2

Query: 188 QSDCDSSSSVILDTDEVSPLELYEDPLCRRPFLDLNLPPPDEDTED 325
QSDCDSSSSVI + D +L PF DLNL PP ED +D
Sbjct: 145 QSDCDSSSSVIDECDG----DLTSSSRKPLPF-DLNLLPPSEDGDD 185


>tr|Q7XR67|Q7XR67_ORYSJ Os04g0669200 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0043A12.18 PE=4 SV=1
Length = 190

Score = 35.4 bits (80), Expect = 1.7
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2

Query: 182 GYQSDCDSSSSVILDTDEVSPLELYEDPLCRRPFLDLNLPPP-DEDTEDV 328
G SDC SS+SV+ D D+ S + R DLNLPPP D D D+
Sbjct: 141 GCHSDCASSASVVDDADDASTVR------SRVAAFDLNLPPPLDRDHVDL 184


>tr|Q259P7|Q259P7_ORYSA H0818H01.4 protein (B0811B10.20 protein)
OS=Oryza sativa GN=H0818H01.4 PE=4 SV=1
Length = 190

Score = 35.4 bits (80), Expect = 1.7
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2

Query: 182 GYQSDCDSSSSVILDTDEVSPLELYEDPLCRRPFLDLNLPPP-DEDTEDV 328
G SDC SS+SV+ D D+ S + R DLNLPPP D D D+
Sbjct: 141 GCHSDCASSASVVDDADDASTVR------SRVAAFDLNLPPPLDRDHVDL 184


>tr|A2XYS1|A2XYS1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_17852 PE=4 SV=1
Length = 184

Score = 35.4 bits (80), Expect = 1.7
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2

Query: 182 GYQSDCDSSSSVILDTDEVSPLELYEDPLCRRPFLDLNLPPP-DEDTEDV 328
G SDC SS+SV+ D D+ S + R DLNLPPP D D D+
Sbjct: 135 GCHSDCASSASVVDDADDASTVR------SRVAAFDLNLPPPLDRDHVDL 178


>tr|Q2QDF5|Q2QDF5_GOSHI Ethylene-responsive element-binding factor
OS=Gossypium hirsutum GN=ERF3 PE=2 SV=1
Length = 225

Score = 35.0 bits (79), Expect = 2.2
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +2

Query: 167 RVEPMGYQSDCDSSSSVILDTDEVSPLELYEDPLCRRPFLDLNLPPPDE 313
R+ P +SDCDSSSSV+ D D+ + L PF DLN PP DE
Sbjct: 173 RMAPEDCRSDCDSSSSVVDDGDDDNVSSSRRKIL---PF-DLNFPPLDE 217


>tr|A9SW67|A9SW67_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_189022 PE=4 SV=1
Length = 300

Score = 35.0 bits (79), Expect = 2.2
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = +2

Query: 134 VHGFSANVNNTRVEPMGYQSDCDSSSSVILDTD---EVSPLELYEDPLCRR---PF-LDL 292
V G + + E SDCDSSSSVIL+++ P P+ RR PF LDL
Sbjct: 232 VLGMEQHASEITPETRACHSDCDSSSSVILNSEAACATPPTPHDAKPVMRRTPYPFLLDL 291

Query: 293 NLPP 304
N PP
Sbjct: 292 NQPP 295


>tr|B6SZ49|B6SZ49_MAIZE Ethylene-responsive transcription factor 3
OS=Zea mays PE=2 SV=1
Length = 172

Score = 34.7 bits (78), Expect = 2.9
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2

Query: 188 QSDCDSSSSVILDTDEVSPLELYEDPLCRRPFLDLNLPPP 307
+SDC SS+SV+ D D+ S + RP LDLNLP P
Sbjct: 123 RSDCASSASVVDDGDDASTVR-------SRPALDLNLPAP 155


>tr|B6QSX5|B6QSX5_PENMA Ankyrin repeat-containing protein, putative
OS=Penicillium marneffei ATCC 18224 GN=PMAA_003010 PE=4
SV=1
Length = 1431

Score = 34.7 bits (78), Expect = 2.9
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2

Query: 191 SDCDSSSSVILDTDEVSPLELYEDPLCRRPFLDLNLPPPDEDTEDVK 331
+D +S++V DTD+ S +E +DP+ P L+ ++ P E TE VK
Sbjct: 1331 TDESASTTVTFDTDQTSLMETQDDPI--NPELNEDIKIPSEQTESVK 1375


>tr|Q5MJ54|Q5MJ54_PEA AT-rich element binding factor 2 OS=Pisum
sativum GN=ATF2 PE=2 SV=1
Length = 218

Score = 34.3 bits (77), Expect = 3.8
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2

Query: 170 VEPMGYQSDCDSSSSVILDTDEVSPLELYEDPLCRRPF-LDLNLPPPDE 313
V P +SDCDSSSSV+ D D + R+P DLN PP +E
Sbjct: 152 VAPGDCRSDCDSSSSVVDDADNDNAASSTMLSFKRQPLPFDLNAPPLEE 200