BP920451
Clone id YMU001_000137_C04
Library
Length 381
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAGAGTATGTGGAGCGGAGGTCACTCTTAAAGAGTGAATCAATACCACTTTAACAGGATG
GGTGTGTGCATTGCAGGTCTCTTTTGAATTTGAGAACCTACACCATATCATCAGTTTGAG
AAAGTTTTCCGAAAAAATTAAGAAAGAGTGCTGTGAGTATTACTCTTAACAAGGATGTCA
CTGTATACACACCAGAAAGAGTCTTACCCCCACAGTTTTTGCTCTCACTTCAAAATATCG
TCACTTTGCTTGTTCTATATCTCCCCAAATCTGATTAAAAAGCTTGTCAGGCTGGAGTTG
GTCTAAATGATATGCACAATGGTGCGATGACGCATGGAATGCTTTTGAAAGGTTGTGTAT
GCGAGCTTTGGACATAGAATG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920451|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_C04.
(381 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A8X3Y8
Definition tr|A8X3Y8|A8X3Y8_CAEBR CBR-EGL-26 protein OS=Caenorhabditis briggsae
Align length 49
Score (bit) 32.7
E-value 9.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920451|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_C04.
(381 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8X3Y8|A8X3Y8_CAEBR CBR-EGL-26 protein OS=Caenorhabditis brig... 33 9.1

>tr|A8X3Y8|A8X3Y8_CAEBR CBR-EGL-26 protein OS=Caenorhabditis
briggsae GN=Cbr-egl-26 PE=4 SV=1
Length = 317

Score = 32.7 bits (73), Expect = 9.1
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2

Query: 122 KFSEKIKKECCEYYS*QGCHCIHTRKSLTPTV---FALTSKYRHFACSI 259
K++E +++E E Y + C+C H T V + +TS +++FACS+
Sbjct: 242 KYAENLQREL-ETYDIRRCNCQHFTSECTSGVAFSYDMTSNFKYFACSV 289