BP920456
Clone id YMU001_000137_C09
Library
Length 326
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAACTCGCCATTGCAAAGACTTAGGGACCGTTACATTGCATGCTCTCTTAACAGATTTTG
CCATCATTCTCACTTTGCGCATGCACGAAAAAACCAAGGCACTAGAGCACTACACCTTCT
GGCAGTTTCAACCACTACACTACAGATGATATATTCTTCCATAACTTCCACACCACATGA
AAATTTGGCCACATACATAATTAAACCAATCAATAACAGAGCAGGCTCAAAGACCTTTTG
CCATGCATCACTGCACTTGGTCACTCCTCTTCACTCACCTCATTGAGTACCTAAAATAAA
ACTCTGCCTTTCACGCTGAAACAATC
■■Homology search results ■■ -
sp_hit_id Q99527
Definition sp|Q99527|GPER_HUMAN G-protein coupled estrogen receptor 1 OS=Homo sapiens
Align length 66
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920456|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_C09.
(326 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q99527|GPER_HUMAN G-protein coupled estrogen receptor 1 OS=Ho... 31 2.2
sp|Q8BMP4|GPER_MOUSE G-protein coupled estrogen receptor 1 OS=Mu... 29 6.5
sp|Q4R180|ORC3_RAT Origin recognition complex subunit 3 OS=Rattu... 29 8.5

>sp|Q99527|GPER_HUMAN G-protein coupled estrogen receptor 1 OS=Homo
sapiens GN=GPER PE=2 SV=1
Length = 375

Score = 30.8 bits (68), Expect = 2.2
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2

Query: 74 FAHARKNQGTRALHLLAVSTTTLQ-MIYSSITSTPHENLATYIIKPINNRAGSKTFCHAS 250
F HA G ++L A S + L +IYS + T + L YI + N A ++ FCHA+
Sbjct: 298 FRHAHPLTG-HIVNLAAFSNSCLNPLIYSFLGETFRDKLRLYIEQKTNLPALNR-FCHAA 355

Query: 251 LHLVTP 268
L V P
Sbjct: 356 LKAVIP 361


>sp|Q8BMP4|GPER_MOUSE G-protein coupled estrogen receptor 1 OS=Mus
musculus GN=Gper PE=2 SV=1
Length = 375

Score = 29.3 bits (64), Expect = 6.5
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2

Query: 74 FAHARKNQGTRALHLLAVSTTTLQ-MIYSSITSTPHENLATYIIKPINNRAGSKTFCHAS 250
F HA G ++L A+S + L +IYS + T + L Y+ + + A ++ FCHA+
Sbjct: 298 FRHAYPLTG-HIVNLAAISNSCLNPLIYSFLGETFRDKLRLYVEQKTSLPALNR-FCHAT 355

Query: 251 LHLVTP 268
L V P
Sbjct: 356 LKAVIP 361


>sp|Q4R180|ORC3_RAT Origin recognition complex subunit 3 OS=Rattus
norvegicus GN=Orc3l PE=2 SV=1
Length = 711

Score = 28.9 bits (63), Expect = 8.5
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Frame = +2

Query: 65 HSHFAHARKNQGTR--------ALHLLAVSTTTLQMIYSSITSTPHENLATYII 202
HS F N G++ A +L V+ T +I+ S+T T H N+ Y++
Sbjct: 81 HSEFQKNSGNWGSQMRLREIPTAALILGVNVTDHDVIFRSLTETLHNNVTPYVV 134


tr_hit_id Q491W3
Definition tr|Q491W3|Q491W3_BLOPB Glutamine synthetase OS=Blochmannia pennsylvanicus (strain BPEN)
Align length 67
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920456|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_C09.
(326 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q491W3|Q491W3_BLOPB Glutamine synthetase OS=Blochmannia penns... 35 2.4
tr|A2EXG8|A2EXG8_TRIVA Putative uncharacterized protein OS=Trich... 33 9.2
tr|Q7SB51|Q7SB51_NEUCR Predicted protein OS=Neurospora crassa GN... 33 9.2

>tr|Q491W3|Q491W3_BLOPB Glutamine synthetase OS=Blochmannia
pennsylvanicus (strain BPEN) GN=glnA PE=3 SV=1
Length = 474

Score = 34.7 bits (78), Expect = 2.4
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2

Query: 62 HHSHFAHARKNQGTRALHLLAVSTTTLQMIYSSITSTPHEN--LATYIIKPINNRAGSKT 235
HH A + +N+ + L +Q+ + + H + AT++ KPI N GS
Sbjct: 211 HHHEVATSGQNEIATRFNTLTKKADEIQIYKYVVHNVAHNSGKTATFMPKPIINDNGSGM 270

Query: 236 FCHASLH 256
CH SLH
Sbjct: 271 HCHISLH 277


>tr|A2EXG8|A2EXG8_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_253090 PE=4 SV=1
Length = 572

Score = 32.7 bits (73), Expect = 9.2
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +2

Query: 92 NQGTRALHLLAVSTTTLQMIYSSITSTPHENLATYIIKPINN---RAGSKTFCHASLHLV 262
N+G + +S T + ++IT P + ++Y+I+ N SKT A
Sbjct: 65 NEGQDSTTSQILSPTAYTYVATAITKLPFQTTSSYVIQSPKNDKLEVNSKTRSIAPTATP 124

Query: 263 TPLHSPH*VP 292
TPL++PH P
Sbjct: 125 TPLNTPHTTP 134


>tr|Q7SB51|Q7SB51_NEUCR Predicted protein OS=Neurospora crassa
GN=NCU06262 PE=4 SV=1
Length = 525

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2

Query: 20 LRDRYIACSLNRFCHHSHFAHARKNQGTRALHLLAVSTTTLQMIYSSITSTPHENLA 190
+RD Y+A S + H S A +N G + LLAV+ TT+ + S + + H +A
Sbjct: 281 IRDIYLALSNDLAAHGSSAAPVSRNGGYSFMALLAVTITTISLSLSGLFAGAHLAIA 337