BP920457
Clone id YMU001_000137_C10
Library
Length 319
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_C10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCCTTTGAGCTTCTCATGCTCTGCAAGCGGAGCAACTTCGTCGCAAAGCGTGACATGATC
GCCACCTCAGAAAGCCGAAAATAACGCAAGGCACATTGGTGCTACTCTATCAGGCAAAAT
ATTTGAAAAAAGCAAAGAAGCTGGTTCCAACTTGGCAAGGGCCCTTCGTGGTGGAAGAGA
TTCTGCCACAGGGGGCTGTCCAGTTAGTCACCCTGACAGGAGTTCCTTTGCCACTGGTCA
ACGGATCCAGGATTATGTGCTATCACTAGCCATAATCATATACAAAGCTAATGATGATAG
CCATCTCACCACCATATGA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920457|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_C10.
(319 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q4IWC1
Definition tr|Q4IWC1|Q4IWC1_AZOVI Similar to ABC-type phosphonate transport system ATPase component OS=Azotobacter vinelandii DJ
Align length 38
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920457|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_C10.
(319 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4IWC1|Q4IWC1_AZOVI Similar to ABC-type phosphonate transport... 34 4.1
tr|A7QJX4|A7QJX4_VITVI Chromosome undetermined scaffold_108, who... 33 7.1
tr|A5AQ03|A5AQ03_VITVI Putative uncharacterized protein OS=Vitis... 33 7.1
tr|A5AFI3|A5AFI3_VITVI Putative uncharacterized protein OS=Vitis... 33 7.1
tr|A3WZ16|A3WZ16_9BRAD Cystathionine beta-lyase OS=Nitrobacter s... 33 9.2
tr|A5AH79|A5AH79_VITVI Putative uncharacterized protein OS=Vitis... 33 9.3

>tr|Q4IWC1|Q4IWC1_AZOVI Similar to ABC-type phosphonate transport
system ATPase component OS=Azotobacter vinelandii DJ
GN=AvinDRAFT_2483 PE=4 SV=1
Length = 687

Score = 33.9 bits (76), Expect = 4.1
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -2

Query: 198 QPPVAESLPPRRALAKLEPASLLFSNILPDRVAPMCLA 85
+P +A+ LPP AL +L PA+ LPD AP+ LA
Sbjct: 38 EPGLAQPLPPTPALERLAPATYALCLSLPDASAPVWLA 75


>tr|A7QJX4|A7QJX4_VITVI Chromosome undetermined scaffold_108, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00000833001 PE=4 SV=1
Length = 1615

Score = 33.1 bits (74), Expect = 7.1
Identities = 21/92 (22%), Positives = 32/92 (34%)
Frame = +3

Query: 39 RRKA*HDRHLRKPKITQGTXXXXXXXXXXXXXXXXXPTWQGPFVVEEILPQGAXXXXXXX 218
R K HD+ + + T+G W GPF++ E+ P G
Sbjct: 1522 RLKKWHDQLVNQKNFTKGQKVLLYDSKLHLFPGKLKSRWTGPFIIHEVHPNGVVEIFNPT 1581

Query: 219 XXXXXXXNGSRIMCYH*P*SYTKLMMIAISPP 314
NG R+ + P S K + + PP
Sbjct: 1582 GNQTFKVNGHRLKPFLEPYSTDKEEINLLEPP 1613


>tr|A5AQ03|A5AQ03_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028988 PE=4 SV=1
Length = 1873

Score = 33.1 bits (74), Expect = 7.1
Identities = 21/92 (22%), Positives = 32/92 (34%)
Frame = +3

Query: 39 RRKA*HDRHLRKPKITQGTXXXXXXXXXXXXXXXXXPTWQGPFVVEEILPQGAXXXXXXX 218
R K HD+ + + T+G W GPF++ E+ P G
Sbjct: 1780 RLKKWHDQLVNQKNFTKGQKVLLYDSKLHLFPGKLKSRWTGPFIIHEVHPNGVVEVFNPT 1839

Query: 219 XXXXXXXNGSRIMCYH*P*SYTKLMMIAISPP 314
NG R+ + P S K + + PP
Sbjct: 1840 GNQTFKVNGHRLKPFIEPYSTDKEEINLLEPP 1871


>tr|A5AFI3|A5AFI3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_033278 PE=4 SV=1
Length = 1467

Score = 33.1 bits (74), Expect = 7.1
Identities = 21/92 (22%), Positives = 32/92 (34%)
Frame = +3

Query: 39 RRKA*HDRHLRKPKITQGTXXXXXXXXXXXXXXXXXPTWQGPFVVEEILPQGAXXXXXXX 218
R K HD+ + + T+G W GPF++ E+ P G
Sbjct: 1374 RLKKWHDQLVNQKNFTKGQKVLLYDSKLHLFPGKLKSRWTGPFIIHEVHPNGVVEVFNPT 1433

Query: 219 XXXXXXXNGSRIMCYH*P*SYTKLMMIAISPP 314
NG R+ + P S K + + PP
Sbjct: 1434 GNQIFKVNGHRLKPFIEPYSTDKEEINLLEPP 1465


>tr|A3WZ16|A3WZ16_9BRAD Cystathionine beta-lyase OS=Nitrobacter sp.
Nb-311A GN=NB311A_19422 PE=3 SV=1
Length = 398

Score = 32.7 bits (73), Expect = 9.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -2

Query: 162 ALAKLEPASLLFSNILPDRVAPMCLALFSAF*GGDHVTLCDEV 34
ALA LE + ++P V+ + AL S GDHV +CD V
Sbjct: 74 ALATLEGSHCAGVGLVPSGVSAISAALLSVLKAGDHVLVCDNV 116


>tr|A5AH79|A5AH79_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_022969 PE=4 SV=1
Length = 1703

Score = 32.7 bits (73), Expect = 9.3
Identities = 21/91 (23%), Positives = 33/91 (36%)
Frame = +3

Query: 39 RRKA*HDRHLRKPKITQGTXXXXXXXXXXXXXXXXXPTWQGPFVVEEILPQGAXXXXXXX 218
R K HD+ + + +T+G W GPF++ E+ P GA
Sbjct: 1610 RLKKWHDQLVNQKNLTKGQRVLLYDSKLHLFPGKLKSRWTGPFIIHEVHPNGAVEVFNPT 1669

Query: 219 XXXXXXXNGSRIMCYH*P*SYTKLMMIAISP 311
NG R+ + P S K + + P
Sbjct: 1670 GNNTFKVNGHRLKPFIEPYSTDKEEINLLEP 1700