BP920459 |
Clone id |
YMU001_000137_C12 |
Library |
YMU01 |
Length |
243 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000137_C12. |
Accession |
BP920459 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCAAGGGTTTGACGGCATACAGCATATCGTGTGGGCAGAGTCTTCTTTACAACAACATTT TCCCTAAGCATCGTGACAGGCTTGATAAAAAGGTGCTGGACCTTGCAAAGGATATAGCTA AACTGGAAATTTTTCCATCGCGAAGGCAGTTTGACATAGTTGTTGCTTGTGAAGATGATG ATGGCAACGACATTGATGTACCTCTCGTCTCAATATGCCTCTAAATTATTTACAGATAGC CTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31251 |
Definition |
sp|P31251|UBE12_WHEAT Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum |
Align length |
71 |
Score (bit) |
108.0 |
E-value |
6.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920459|Adiantum capillus-veneris mRNA, clone: YMU001_000137_C12. (243 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P31251|UBE12_WHEAT Ubiquitin-activating enzyme E1 2 OS=Tritic... 108 6e-24 sp|P20973|UBE11_WHEAT Ubiquitin-activating enzyme E1 1 OS=Tritic... 108 6e-24 sp|P31252|UBE13_WHEAT Ubiquitin-activating enzyme E1 3 OS=Tritic... 104 2e-22 sp|P52495|UBA1_CANAL Ubiquitin-activating enzyme E1 1 (Fragment)... 54 2e-07 sp|O94609|UBA1_SCHPO Ubiquitin-activating enzyme E1 1 OS=Schizos... 52 1e-06 sp|P22515|UBA1_YEAST Ubiquitin-activating enzyme E1 1 OS=Sacchar... 44 3e-04 sp|Q5U300|UBA1_RAT Ubiquitin-like modifier-activating enzyme 1 O... 39 0.006 sp|Q29504|UBA1_RABIT Ubiquitin-like modifier-activating enzyme 1... 39 0.006 sp|Q02053|UBA1_MOUSE Ubiquitin-like modifier-activating enzyme 1... 39 0.006 sp|P22314|UBA1_HUMAN Ubiquitin-like modifier-activating enzyme 1... 39 0.006 sp|A3KMV5|UBA1_BOVIN Ubiquitin-like modifier-activating enzyme 1... 39 0.006 sp|P31254|UBA1Y_MOUSE Ubiquitin-like modifier-activating enzyme ... 38 0.018 sp|Q899K4|MURA1_CLOTE UDP-N-acetylglucosamine 1-carboxyvinyltran... 30 2.9 sp|Q8NVG3|MURA2_STAAW UDP-N-acetylglucosamine 1-carboxyvinyltran... 30 3.8 sp|Q6G7I6|MURA2_STAAS UDP-N-acetylglucosamine 1-carboxyvinyltran... 30 3.8 sp|Q6GEV1|MURA2_STAAR UDP-N-acetylglucosamine 1-carboxyvinyltran... 30 3.8 sp|P65457|MURA2_STAAN UDP-N-acetylglucosamine 1-carboxyvinyltran... 30 3.8 sp|P65456|MURA2_STAAM UDP-N-acetylglucosamine 1-carboxyvinyltran... 30 3.8 sp|Q5HE76|MURA2_STAAC UDP-N-acetylglucosamine 1-carboxyvinyltran... 30 3.8 sp|Q2YUM9|MURA2_STAAB UDP-N-acetylglucosamine 1-carboxyvinyltran... 30 3.8 sp|Q3YRL2|RL2_EHRCJ 50S ribosomal protein L2 OS=Ehrlichia canis ... 30 4.9 sp|Q49Z71|MURA1_STAS1 UDP-N-acetylglucosamine 1-carboxyvinyltran... 29 6.4 sp|Q3B595|LEU3_PELLD 3-isopropylmalate dehydrogenase OS=Pelodict... 29 6.4
>sp|P31251|UBE12_WHEAT Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1 Length = 1051
Score = 108 bits (271), Expect = 6e-24 Identities = 46/71 (64%), Positives = 63/71 (88%) Frame = +3
Query: 3 KGLTAYSISCGQSLLYNNIFPKHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACEDDD 182 KGL AYSISCG SLLYN++FP+H++RLD+KV+D+A+++AK+E+ RR D+VVACEDDD Sbjct: 978 KGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSYRRHLDVVVACEDDD 1037
Query: 183 GNDIDVPLVSI 215 ND+D+PLVS+ Sbjct: 1038 DNDVDIPLVSV 1048
>sp|P20973|UBE11_WHEAT Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1 Length = 1051
Score = 108 bits (271), Expect = 6e-24 Identities = 46/71 (64%), Positives = 63/71 (88%) Frame = +3
Query: 3 KGLTAYSISCGQSLLYNNIFPKHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACEDDD 182 KGL AYSISCG SLLYN++FP+H++RLD+KV+D+A+++AK+E+ RR D+VVACEDDD Sbjct: 978 KGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSYRRHLDVVVACEDDD 1037
Query: 183 GNDIDVPLVSI 215 ND+D+PLVS+ Sbjct: 1038 DNDVDIPLVSV 1048
>sp|P31252|UBE13_WHEAT Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1 Length = 1053
Score = 104 bits (259), Expect = 2e-22 Identities = 46/71 (64%), Positives = 61/71 (85%) Frame = +3
Query: 3 KGLTAYSISCGQSLLYNNIFPKHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACEDDD 182 KGLTAYSISCG SLLYNN+F +H+DRL KKV+D+A+++AK+++ RR DI VACED+D Sbjct: 980 KGLTAYSISCGTSLLYNNMFARHKDRLTKKVVDIAREVAKVDVPEYRRHLDIGVACEDED 1039
Query: 183 GNDIDVPLVSI 215 ND+D+PLVS+ Sbjct: 1040 ENDVDIPLVSV 1050
>sp|P52495|UBA1_CANAL Ubiquitin-activating enzyme E1 1 (Fragment) OS=Candida albicans GN=UBA1 PE=3 SV=1 Length = 205
Score = 54.3 bits (129), Expect = 2e-07 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Frame = +3
Query: 3 KGLTAYSISCGQSLLYNNIFP--KHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACED 176 +GLT +S G SLLY + FP K +DRL K+ L K+++K E+ + + C+D Sbjct: 131 EGLTISMLSYGVSLLYASFFPPKKVKDRLGLKLTSLIKEVSKKEVPSHVKNLIFEICCDD 190
Query: 177 DDGNDIDVPLVSICL 221 ++G D++VP + + L Sbjct: 191 EEGEDVEVPYICVKL 205
>sp|O94609|UBA1_SCHPO Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe GN=ptr3 PE=1 SV=1 Length = 1012
Score = 51.6 bits (122), Expect = 1e-06 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Frame = +3
Query: 3 KGLTAYSISCGQSLLYNNIFP--KHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACED 176 +GL +S G SLLY N P K +RL K+ +L + I K ++ P R+ + + C+D Sbjct: 938 EGLEVTMLSSGVSLLYANFQPPKKLAERLPLKISELVEQITKKKLEPFRKHLVLEICCDD 997
Query: 177 DDGNDIDVPLVSICL 221 +G D++VP + I L Sbjct: 998 ANGEDVEVPFICIKL 1012
>sp|P22515|UBA1_YEAST Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2 Length = 1024
Score = 43.5 bits (101), Expect = 3e-04 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%) Frame = +3
Query: 3 KGLTAYSISCGQSLLYNNIFP--KHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACED 176 +GL +S G SLLY + FP K ++RL+ + L K + K +I P+ I+ C D Sbjct: 950 EGLEITMLSYGVSLLYASFFPPKKLKERLNLPITQLVKLVTKKDI-PAHVSTMILEICAD 1008
Query: 177 D-DGNDIDVPLVSICL 221 D +G D++VP ++I L Sbjct: 1009 DKEGEDVEVPFITIHL 1024
>sp|Q5U300|UBA1_RAT Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus GN=Uba1 PE=1 SV=1 Length = 1058
Score = 39.3 bits (90), Expect = 0.006 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +3
Query: 24 ISCGQSLLYNNIFP--KHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACEDDDGNDID 197 +S G S+LY+ P K ++RLD+ + ++ ++K ++ R + + C D+ G D++ Sbjct: 990 LSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVE 1049
Query: 198 VPLV 209 VP V Sbjct: 1050 VPYV 1053
>sp|Q29504|UBA1_RABIT Ubiquitin-like modifier-activating enzyme 1 OS=Oryctolagus cuniculus GN=UBA1 PE=2 SV=1 Length = 1058
Score = 39.3 bits (90), Expect = 0.006 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +3
Query: 24 ISCGQSLLYNNIFP--KHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACEDDDGNDID 197 +S G S+LY+ P K ++RLD+ + ++ ++K ++ R + + C D+ G D++ Sbjct: 990 LSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVE 1049
Query: 198 VPLV 209 VP V Sbjct: 1050 VPYV 1053
>sp|Q02053|UBA1_MOUSE Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus GN=Uba1 PE=1 SV=1 Length = 1058
Score = 39.3 bits (90), Expect = 0.006 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +3
Query: 24 ISCGQSLLYNNIFP--KHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACEDDDGNDID 197 +S G S+LY+ P K ++RLD+ + ++ ++K ++ R + + C D+ G D++ Sbjct: 990 LSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVE 1049
Query: 198 VPLV 209 VP V Sbjct: 1050 VPYV 1053
>sp|P22314|UBA1_HUMAN Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3 Length = 1058
Score = 39.3 bits (90), Expect = 0.006 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = +3
Query: 24 ISCGQSLLYNNIFP--KHRDRLDKKVLDLAKDIAKLEIFPSRRQFDIVVACEDDDGNDID 197 +S G S+LY+ P K ++RLD+ + ++ ++K ++ R + + C D+ G D++ Sbjct: 990 LSQGVSMLYSFFMPAAKLKERLDQPMTEIVSRVSKRKLGRHVRALVLELCCNDESGEDVE 1049
Query: 198 VPLV 209 VP V Sbjct: 1050 VPYV 1053
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NU65 |
Definition |
tr|A9NU65|A9NU65_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
72 |
Score (bit) |
130.0 |
E-value |
2.0e-29 |
Report |
|