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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920461
Clone id YMU001_000137_D02
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGGTC
TCAAGGCTACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATAGCA
GCCGTGTGAGCGCCGATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTG
TCCTACTTGCCGCCTTTGTCAAGGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCG
AAAAGGCTGGACCCCTTGCATAGAGTTCGAGCAAAATCGGGAGCGTGTACCGAGAGCACT
TCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTG
GCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTG
AAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 63
Score (bit) 108.0
E-value 7.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920461|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_D02.
         (474 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   108   7e-33
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   105   2e-32
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   100   6e-32
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   102   1e-31
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   105   2e-31
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   103   4e-31
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...    94   4e-31
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   101   1e-30
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...    96   1e-30
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   100   1e-30
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...    99   1e-30
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...    99   1e-30
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...    99   1e-30
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...    97   2e-30
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...    99   2e-30
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain...    93   3e-30
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain...    93   3e-30
sp|Q39749|RBS7_FLAPR Ribulose bisphosphate carboxylase small cha...   100   1e-29
sp|Q39747|RBS5_FLAPR Ribulose bisphosphate carboxylase small cha...   100   1e-29
sp|Q39745|RBS3_FLAPR Ribulose bisphosphate carboxylase small cha...   100   1e-29
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...    99   1e-29
sp|P26574|RBS1_SOLTU Ribulose bisphosphate carboxylase small cha...    99   2e-29
sp|Q08183|RBS3_MESCR Ribulose bisphosphate carboxylase small cha...    97   2e-29
sp|P16032|RBS1_MESCR Ribulose bisphosphate carboxylase small cha...    97   2e-29
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai...    94   2e-29
sp|P12468|RBS4_SOYBN Ribulose bisphosphate carboxylase small cha...    95   2e-29
sp|Q08184|RBS4_MESCR Ribulose bisphosphate carboxylase small cha...    97   3e-29
sp|Q42823|RBS_GLYTA Ribulose bisphosphate carboxylase small chai...    98   3e-29
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...    91   3e-29
sp|Q08185|RBS5_MESCR Ribulose bisphosphate carboxylase small cha...    97   4e-29

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  108 bits (271), Expect(3) = 7e-33
 Identities = 46/63 (73%), Positives = 51/63 (80%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  R
Sbjct: 106 GFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIR 165

Query: 459 QVQ 467
           QVQ
Sbjct: 166 QVQ 168



 Score = 36.6 bits (83), Expect(3) = 7e-33
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KK+ETLSYLPPLS
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLS 79



 Score = 34.7 bits (78), Expect(3) = 7e-33
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFE 271
           E ++K++D+++R  W PC+EFE
Sbjct: 81  EALSKEIDYLIRNKWIPCLEFE 102


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  105 bits (263), Expect(3) = 2e-32
 Identities = 44/64 (68%), Positives = 51/64 (79%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH    GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KR
Sbjct: 108 GFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKR 167

Query: 459 QVQV 470
           QVQ+
Sbjct: 168 QVQI 171



 Score = 37.7 bits (86), Expect(3) = 2e-32
 Identities = 17/22 (77%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLPPLS
Sbjct: 60  MQVWPPLGLKKFETLSYLPPLS 81



 Score = 35.4 bits (80), Expect(3) = 2e-32
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFE 271
           EQ+AK+VD+++RK   PC+EFE
Sbjct: 83  EQLAKEVDYLLRKNLIPCLEFE 104


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  100 bits (249), Expect(3) = 6e-32
 Identities = 41/65 (63%), Positives = 52/65 (80%)
 Frame = +3

Query: 273 KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDA 452
           K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD 
Sbjct: 102 KVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDN 161

Query: 453 KRQVQ 467
            RQVQ
Sbjct: 162 TRQVQ 166



 Score = 39.3 bits (90), Expect(3) = 6e-32
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLSR 204
           M VW P   KKFETLSYLPPL+R
Sbjct: 57  MQVWPPEGKKKFETLSYLPPLTR 79



 Score = 37.4 bits (85), Expect(3) = 6e-32
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEF 268
           EQ+ ++VD+++R GW PCIEF
Sbjct: 80  EQLGQEVDYLIRNGWIPCIEF 100


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  102 bits (255), Expect(3) = 1e-31
 Identities = 43/63 (68%), Positives = 52/63 (82%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYRE+    GYYDGRYW MWKLPMFGC D+A V++E+AEC KEYP+A+IR++GFD  R
Sbjct: 104 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVR 163

Query: 459 QVQ 467
           QVQ
Sbjct: 164 QVQ 166



 Score = 38.1 bits (87), Expect(3) = 1e-31
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +2

Query: 209 QIAKQVDFMVRKGWTPCIEFE 271
           Q+AK+VD+++RK W PC+EFE
Sbjct: 80  QLAKEVDYLLRKKWVPCLEFE 100



 Score = 35.4 bits (80), Expect(3) = 1e-31
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KK+ETLSYLPPL+
Sbjct: 56  MKVWPPLGLKKYETLSYLPPLT 77


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  105 bits (261), Expect(3) = 2e-31
 Identities = 44/63 (69%), Positives = 51/63 (80%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH +  GYYDGRYW MWKLP+FGC D+A VL+E+ EC KEYP AFIR++GFD  R
Sbjct: 104 GFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTR 163

Query: 459 QVQ 467
           QVQ
Sbjct: 164 QVQ 166



 Score = 35.8 bits (81), Expect(3) = 2e-31
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = +2

Query: 209 QIAKQVDFMVRKGWTPCIEFE 271
           ++AK+VD+++R  W PC+EFE
Sbjct: 80  ELAKEVDYLIRNKWIPCVEFE 100



 Score = 34.7 bits (78), Expect(3) = 2e-31
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLP L+
Sbjct: 56  MQVWPPIGKKKFETLSYLPDLT 77


>sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small chain
           3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B
           PE=1 SV=2
          Length = 181

 Score =  103 bits (257), Expect(3) = 4e-31
 Identities = 44/63 (69%), Positives = 51/63 (80%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH +  GYYDGRYW MWKLP+FGC D+A VL+E+ EC KEYP AFIR++GFD  R
Sbjct: 104 GFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTR 163

Query: 459 QVQ 467
           QVQ
Sbjct: 164 QVQ 166



 Score = 35.8 bits (81), Expect(3) = 4e-31
 Identities = 16/22 (72%), Positives = 16/22 (72%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLP LS
Sbjct: 56  MKVWPPIGKKKFETLSYLPDLS 77



 Score = 35.0 bits (79), Expect(3) = 4e-31
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = +2

Query: 209 QIAKQVDFMVRKGWTPCIEFE 271
           ++AK+VD+++R  W PC+EFE
Sbjct: 80  ELAKEVDYLLRNKWIPCVEFE 100


>sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Medicago sativa PE=2 SV=1
          Length = 180

 Score = 94.4 bits (233), Expect(3) = 4e-31
 Identities = 38/63 (60%), Positives = 50/63 (79%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYRE+    GYYDGRYW MW+LP+FG  D++ VL+E+A+C  EYP++FIR++GFD  R
Sbjct: 106 GFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVR 165

Query: 459 QVQ 467
           QVQ
Sbjct: 166 QVQ 168



 Score = 42.4 bits (98), Expect(3) = 4e-31
 Identities = 16/30 (53%), Positives = 24/30 (80%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFEQNRERVPR 295
           EQ+AK+V++++RKGW PC+EFE  +  V R
Sbjct: 81  EQLAKEVEYLIRKGWIPCLEFELEKGFVYR 110



 Score = 37.7 bits (86), Expect(3) = 4e-31
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLPPL+
Sbjct: 58  MQVWPPVGKKKFETLSYLPPLT 79


>sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1
          Length = 181

 Score =  101 bits (252), Expect(3) = 1e-30
 Identities = 43/63 (68%), Positives = 49/63 (77%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH    GYYDGRYW MWKLP+FGC D+A VL+E+ EC KEYP A IR++GFD  R
Sbjct: 104 GFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNR 163

Query: 459 QVQ 467
           QVQ
Sbjct: 164 QVQ 166



 Score = 35.8 bits (81), Expect(3) = 1e-30
 Identities = 16/22 (72%), Positives = 16/22 (72%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLP LS
Sbjct: 56  MKVWPPIGKKKFETLSYLPDLS 77



 Score = 35.0 bits (79), Expect(3) = 1e-30
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = +2

Query: 209 QIAKQVDFMVRKGWTPCIEFE 271
           ++AK+VD+++R  W PC+EFE
Sbjct: 80  ELAKEVDYLLRNKWIPCVEFE 100


>sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1
          Length = 183

 Score = 95.9 bits (237), Expect(3) = 1e-30
 Identities = 40/63 (63%), Positives = 49/63 (77%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYRE+    GYYDGRYW MWKLPMFGC D++ VL+E+ E  K YP++FIR++GFD  R
Sbjct: 109 GFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVR 168

Query: 459 QVQ 467
           QVQ
Sbjct: 169 QVQ 171



 Score = 38.9 bits (89), Expect(3) = 1e-30
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFE 271
           E +AK+VD+++RK W PC+EFE
Sbjct: 84  ESLAKEVDYLLRKNWVPCLEFE 105



 Score = 37.7 bits (86), Expect(3) = 1e-30
 Identities = 17/22 (77%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLPPLS
Sbjct: 61  MQVWPPLGLKKFETLSYLPPLS 82


>sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small chain
           8B, chloroplastic OS=Nicotiana plumbaginifolia
           GN=RBCS-8B PE=3 SV=1
          Length = 180

 Score =  100 bits (249), Expect(3) = 1e-30
 Identities = 42/63 (66%), Positives = 48/63 (76%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH H  GYYDGRYW MWKLPMFGC DA  VL E+ E  K YP+A++R++GFD  R
Sbjct: 106 GFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVR 165

Query: 459 QVQ 467
           QVQ
Sbjct: 166 QVQ 168



 Score = 36.2 bits (82), Expect(3) = 1e-30
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFEQNRERVPR 295
           EQ+  +++++++ GW PC+EFE  R  V R
Sbjct: 81  EQLLSEIEYLLKSGWVPCLEFETERGFVYR 110



 Score = 35.8 bits (81), Expect(3) = 1e-30
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLSR 204
           M VW P + KK+ETLSYLP LS+
Sbjct: 58  MQVWPPINKKKYETLSYLPDLSQ 80
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 165
Score (bit) 181.0
E-value 2.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920461|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_D02.
         (474 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   103   1e-32
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   110   3e-32
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   105   3e-30
tr|Q84LN2|Q84LN2_CITLI Ribulose bisphosphate carboxylase small c...   103   4e-30
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   103   5e-30
tr|Q9ZP07|Q9ZP07_CICAR Ribulose bisphosphate carboxylase small c...    96   8e-30
tr|Q9AXP2|Q9AXP2_CITRE Ribulose bisphosphate carboxylase small c...   101   1e-29
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...    94   2e-29
tr|A7YVW6|A7YVW6_ACTCH Ribulose bisphosphate carboxylase small c...    99   2e-29
tr|B7FHB2|B7FHB2_MEDTR Putative uncharacterized protein OS=Medic...    92   3e-29
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...    99   6e-29
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...    99   6e-29
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...    99   6e-29
tr|A7YVW5|A7YVW5_ACTDE Ribulose bisphosphate carboxylase small c...    99   6e-29
tr|Q84NG5|Q84NG5_FLABI Ribulose bisphosphate carboxylase small c...   100   6e-29
tr|Q9AUJ3|Q9AUJ3_FLAPA Ribulose bisphosphate carboxylase small c...   100   6e-29
tr|Q9AQX3|Q9AQX3_FLAPA Ribulose bisphosphate carboxylase small c...   100   6e-29
tr|Q9AUJ5|Q9AUJ5_FLARA Ribulose bisphosphate carboxylase small c...   100   8e-29
tr|Q96360|Q96360_BETVE Ribulose bisphosphate carboxylase small c...    97   8e-29
tr|B7ZYT6|B7ZYT6_MAIZE Putative uncharacterized protein OS=Zea m...    89   1e-28
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...    96   1e-28
tr|Q9AUJ6|Q9AUJ6_FLARA Ribulose bisphosphate carboxylase small c...   100   1e-28
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...    96   2e-28
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...    96   2e-28
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...    96   2e-28
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...    96   2e-28
tr|A9YTZ8|A9YTZ8_SOLTU Ribulose bisphosphate carboxylase small c...    99   2e-28
tr|Q84QE5|Q84QE5_TOBAC Ribulose bisphosphate carboxylase small c...    96   2e-28
tr|Q9FUJ5|Q9FUJ5_SOYBN Ribulose bisphosphate carboxylase small c...    96   2e-28

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  181 bits (459), Expect = 2e-44
 Identities = 101/165 (61%), Positives = 110/165 (66%), Gaps = 8/165 (4%)
 Frame = +3

Query: 3   AVVAPSCAPA-ESLSKSFSGLKATTLFAPKSPNPLAISNSSRVSADACVEAV*QQEVRDS 179
           AV APSCA A ESLSKSFSGLKA TLFAPK  NPLAISN SR+SA    +    ++    
Sbjct: 9   AVSAPSCAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETL 68

Query: 180 VLLAAFVKVS-------RLRSRWTSWSEKAGPLA*SSSKIGSVYREHFHGSGYYDGRYWV 338
             L               +R  WT   E           IGSVYREHFHGSGYYDGRYW+
Sbjct: 69  SYLPPLTNDQIAKQVEYMVRKGWTPCIE--------FDTIGSVYREHFHGSGYYDGRYWI 120

Query: 339 MWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 473
           MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLGFDAKRQVQV+
Sbjct: 121 MWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVA 165


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  103 bits (258), Expect(3) = 1e-32
 Identities = 43/63 (68%), Positives = 51/63 (80%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYRE+    GYYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP AF+R++GFD KR
Sbjct: 98  GFVYRENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKR 157

Query: 459 QVQ 467
           QVQ
Sbjct: 158 QVQ 160



 Score = 41.2 bits (95), Expect(3) = 1e-32
 Identities = 18/22 (81%), Positives = 18/22 (81%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           MLVW P   KKFETLSYLPPLS
Sbjct: 50  MLVWPPLGRKKFETLSYLPPLS 71



 Score = 38.1 bits (87), Expect(3) = 1e-32
 Identities = 12/22 (54%), Positives = 19/22 (86%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFE 271
           E + K+V++++RKGW PC+EFE
Sbjct: 73  ESLTKEVEYLLRKGWVPCLEFE 94


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  110 bits (275), Expect(3) = 3e-32
 Identities = 46/63 (73%), Positives = 52/63 (82%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ R
Sbjct: 106 GFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVR 165

Query: 459 QVQ 467
           QVQ
Sbjct: 166 QVQ 168



 Score = 36.6 bits (83), Expect(3) = 3e-32
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KK+ETLSYLPPLS
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLS 79



 Score = 35.0 bits (79), Expect(3) = 3e-32
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFE 271
           E ++K++D+++R  W PC+EFE
Sbjct: 81  EALSKEIDYLIRNKWVPCLEFE 102


>tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small
           chain OS=Arabidopsis thaliana GN=At1g67090 PE=2 SV=1
          Length = 180

 Score =  105 bits (261), Expect(3) = 3e-30
 Identities = 44/63 (69%), Positives = 51/63 (80%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH +  GYYDGRYW MWKLP+FGC D+A VL+E+ EC KEYP AFIR++GFD  R
Sbjct: 104 GFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTR 163

Query: 459 QVQ 467
           QVQ
Sbjct: 164 QVQ 166



 Score = 35.8 bits (81), Expect(3) = 3e-30
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = +2

Query: 209 QIAKQVDFMVRKGWTPCIEFE 271
           ++AK+VD+++R  W PC+EFE
Sbjct: 80  ELAKEVDYLIRNKWIPCVEFE 100



 Score = 34.7 bits (78), Expect(3) = 3e-30
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLP L+
Sbjct: 56  MQVWPPIGKKKFETLSYLPDLT 77


>tr|Q84LN2|Q84LN2_CITLI Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Citrus limon PE=2 SV=1
          Length = 119

 Score =  103 bits (256), Expect(3) = 4e-30
 Identities = 43/63 (68%), Positives = 49/63 (77%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH    GYYDGRYW MWKLPMFGC DA  VL+E+ E  KEYP +F+R++GFD KR
Sbjct: 55  GWVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKR 114

Query: 459 QVQ 467
           QVQ
Sbjct: 115 QVQ 117



 Score = 37.4 bits (85), Expect(3) = 4e-30
 Identities = 17/22 (77%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLPPLS
Sbjct: 7   MKVWPPTGLKKFETLSYLPPLS 28



 Score = 34.7 bits (78), Expect(3) = 4e-30
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFEQNRERVPR 295
           E + K++++++R GW PC+EFE  +  V R
Sbjct: 30  EALLKEINYLLRSGWIPCLEFELEKGWVYR 59


>tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos
           taurus PE=2 SV=1
          Length = 179

 Score =  103 bits (256), Expect(3) = 5e-30
 Identities = 43/63 (68%), Positives = 51/63 (80%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH    GYYDGRYW MWKLPMFGC D+A VL+E+ EC KEYP+++IR++GFD  R
Sbjct: 105 GFVYREHHRSPGYYDGRYWTMWKLPMFGCTDSAQVLKELNECKKEYPQSWIRIIGFDNVR 164

Query: 459 QVQ 467
           QVQ
Sbjct: 165 QVQ 167



 Score = 36.2 bits (82), Expect(3) = 5e-30
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = +2

Query: 209 QIAKQVDFMVRKGWTPCIEFE 271
           Q+AK+VD+++R  W PC+EFE
Sbjct: 81  QLAKEVDYLLRNKWVPCLEFE 101



 Score = 35.4 bits (80), Expect(3) = 5e-30
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KK+ETLSYLPPL+
Sbjct: 57  MKVWPPLGLKKYETLSYLPPLT 78


>tr|Q9ZP07|Q9ZP07_CICAR Ribulose bisphosphate carboxylase small
           chain OS=Cicer arietinum PE=2 SV=1
          Length = 181

 Score = 96.3 bits (238), Expect(3) = 8e-30
 Identities = 40/63 (63%), Positives = 48/63 (76%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH +  GYYDGRYW MWKLP+FGC +A  VL+E+ E  K YP AF+R++GFD  R
Sbjct: 107 GFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVR 166

Query: 459 QVQ 467
           QVQ
Sbjct: 167 QVQ 169



 Score = 40.0 bits (92), Expect(3) = 8e-30
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFEQNRERVPR 295
           EQ+ K+V++++RKGW PC+EFE  +  V R
Sbjct: 82  EQLLKEVEYLLRKGWVPCLEFELEKGFVYR 111



 Score = 37.7 bits (86), Expect(3) = 8e-30
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLPPL+
Sbjct: 59  MQVWPPIGKKKFETLSYLPPLT 80


>tr|Q9AXP2|Q9AXP2_CITRE Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Citrus reticulata PE=2 SV=1
          Length = 118

 Score =  101 bits (252), Expect(3) = 1e-29
 Identities = 42/63 (66%), Positives = 49/63 (77%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH    GYYDGRYW MWKLPM+GC DA  VL+E+ E  KEYP +F+R++GFD KR
Sbjct: 50  GWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKR 109

Query: 459 QVQ 467
           QVQ
Sbjct: 110 QVQ 112



 Score = 37.4 bits (85), Expect(3) = 1e-29
 Identities = 17/22 (77%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M VW P   KKFETLSYLPPLS
Sbjct: 2   MQVWPPTGLKKFETLSYLPPLS 23



 Score = 34.3 bits (77), Expect(3) = 1e-29
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFEQNRERVPR 295
           E + K++ +++R GW PC+EFE  +  V R
Sbjct: 25  EALLKEISYLLRSGWIPCLEFELEKGWVYR 54


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score = 94.4 bits (233), Expect(3) = 2e-29
 Identities = 41/65 (63%), Positives = 48/65 (73%)
 Frame = +3

Query: 273 KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDA 452
           ++GSV REH    GYYDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD 
Sbjct: 95  EVGSVRREHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDN 154

Query: 453 KRQVQ 467
           K Q Q
Sbjct: 155 KHQGQ 159



 Score = 39.7 bits (91), Expect(3) = 2e-29
 Identities = 12/23 (52%), Positives = 21/23 (91%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEFEQ 274
           + IAK++D+M++KGW PC+EF++
Sbjct: 73  DSIAKEIDYMMKKGWIPCLEFDE 95



 Score = 38.9 bits (89), Expect(3) = 2e-29
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPLS 201
           M  W P +NKKFE LSYLPPLS
Sbjct: 50  MKTWNPINNKKFEALSYLPPLS 71


>tr|A7YVW6|A7YVW6_ACTCH Ribulose bisphosphate carboxylase small
           chain OS=Actinidia chinensis GN=RBCS1 PE=2 SV=1
          Length = 176

 Score = 98.6 bits (244), Expect(3) = 2e-29
 Identities = 41/63 (65%), Positives = 48/63 (76%)
 Frame = +3

Query: 279 GSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 458
           G VYREH H  GYYDGRYW MWKLPM+GC D+  V  E+    KEYP++FIR++GFD KR
Sbjct: 100 GFVYREHHHSPGYYDGRYWTMWKLPMYGCTDSTQVRAEVEANKKEYPDSFIRIIGFDNKR 159

Query: 459 QVQ 467
           QVQ
Sbjct: 160 QVQ 162



 Score = 37.4 bits (85), Expect(3) = 2e-29
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = +1

Query: 136 MLVWKPYDNKKFETLSYLPPL 198
           M VW P   KKFETLSYLPPL
Sbjct: 52  MQVWPPLGKKKFETLSYLPPL 72



 Score = 36.6 bits (83), Expect(3) = 2e-29
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +2

Query: 206 EQIAKQVDFMVRKGWTPCIEF 268
           E + KQ+D+++R GW PCIEF
Sbjct: 75  EALLKQIDYLIRMGWIPCIEF 95