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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920467
Clone id YMU001_000137_D09
Library
Length 467
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAAGCAACGGTTTGCAATTGCAAAATTTGAAACACATCTATTGTCTGTGGGAAGCATTTG
TACATGGAGCCGTTCTGCTTCGGAGCTGGAGATTCCACATTCAATTACAGATTCCTCATT
GAGCGCACAAAGAATAAATTGAGGGAAAATAAATCCTTAATCCGGCATTTGACATTGTAT
CCAGCTTTGCACGCAAGCACCGCTGCTTTGTAACACTCAAAAGGGCACTCAAAATGGCCC
AGAAAAACATCAAATAACCTCCAGGAATTCCTCATCAGTCTTCATACACCGTACACTGCT
TAGACCTGAATACTTCATCTGACAGCTGCCTCCTTACCAATGCTTCAAGCCTCTTATATC
CAACCCCTGGCCTCAATATGTTAGGATCACCTATTCCTGCACATGGATCCCCCCAAAGGT
TCGTACCTATGCACCAACCCCCCGGTGTAACATGATCTTTCTTCCAG
■■Homology search results ■■ -
sp_hit_id O61065
Definition sp|O61065|RIR1_CRYPV Ribonucleoside-diphosphate reductase large chain OS=Cryptosporidium parvum
Align length 93
Score (bit) 34.3
E-value 0.28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920467|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_D09.
         (467 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O61065|RIR1_CRYPV Ribonucleoside-diphosphate reductase large ...    34   0.28 
sp|P77460|YBCY_ECOLI Putative uncharacterized protein ybcY OS=Es...    32   1.4  
sp|Q7TPK6|WNK4_RAT Serine/threonine-protein kinase WNK4 OS=Rattu...    30   4.0  
sp|Q8SSS9|QKGA_DICDI Probable serine/threonine-protein kinase qk...    30   5.2  
sp|P00723|BGAL_KLULA Beta-galactosidase OS=Kluyveromyces lactis ...    30   5.2  
sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Hom...    30   6.8  
sp|Q5RDB8|NPAL1_PONAB NIPA-like protein 1 OS=Pongo abelii GN=NPA...    30   6.8  
sp|Q80UE6|WNK4_MOUSE Serine/threonine-protein kinase WNK4 OS=Mus...    29   8.9  
sp|O74359|MUG60_SCHPO Meiotically up-regulated gene 60 protein O...    29   8.9  

>sp|O61065|RIR1_CRYPV Ribonucleoside-diphosphate reductase large
           chain OS=Cryptosporidium parvum GN=RNR1 PE=3 SV=2
          Length = 803

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
 Frame = +3

Query: 138 IEGK*ILNPAFDIVSSFARKHRCFVTLKRA--LKMAQKNIK*PPGIPHQSSYTVHCLDLN 311
           +E +  +N   D    F   +  F TL+R+  LK+  K ++ P  +  + S  +HC D+ 
Sbjct: 123 MENRERINSKIDFSKDFEYDYFAFKTLERSYLLKIDNKVVERPQHLLMRVSCGIHCGDIE 182

Query: 312 TSSDSCLLTNASSLLYPTPGLNMLGSPIPAHGS 410
            + ++  L +     + TP L   G+P P   S
Sbjct: 183 AALETYELLSQKYFTHATPTLFNSGTPRPQMSS 215


>sp|P77460|YBCY_ECOLI Putative uncharacterized protein ybcY
           OS=Escherichia coli (strain K12) GN=ybcY PE=5 SV=2
          Length = 194

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +3

Query: 282 SYTVHCLDLNTSSDSCLLTNASSLLYPTP---GLNMLGSPIPAHGSPQRFVPMHQPPGV 449
           SY +HCL  N S+ SC++ NA+  L       G  +LG  +  +   Q+ + ++   G+
Sbjct: 97  SYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGI 155


>sp|Q7TPK6|WNK4_RAT Serine/threonine-protein kinase WNK4 OS=Rattus
            norvegicus GN=Wnk4 PE=2 SV=3
          Length = 1222

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 258  PPGIPHQSSYTVHCLDLNTSSDSCLLTNASSLLYPTPGLNMLGSPIPAHGSPQRFVPM 431
            PP +P  S+     L L ++    ++T A SLL P+PGL     P P    P   +P+
Sbjct: 894  PPPLP--STTAAPLLSLASAFSLAVMTVAQSLLSPSPGLLSQSPPAPPGPLPSMPLPL 949


>sp|Q8SSS9|QKGA_DICDI Probable serine/threonine-protein kinase qkgA
           OS=Dictyostelium discoideum GN=qkgA-1 PE=3 SV=2
          Length = 1553

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +3

Query: 213 TLKRALKMAQKNIK*PPGIPHQSSYTVHCLDLNTSSDSCLLTNASSLLYPTPGLNMLGSP 392
           ++K+  ++ QK         HQ     H L  ++SS S   T++S  L  +P   +  SP
Sbjct: 80  SIKKMKRVVQKLSNESTNSSHQFDLHSHALLQSSSSSSSSSTSSSPSLTSSPSSPISTSP 139

Query: 393 IPAHGSPQRFVP-MHQPPGVT 452
            P H SPQ     +HQ   +T
Sbjct: 140 -PYHSSPQLLEHLLHQQQPIT 159


>sp|P00723|BGAL_KLULA Beta-galactosidase OS=Kluyveromyces lactis
           GN=LAC4 PE=3 SV=2
          Length = 1025

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 14  AIAKFETHLLSVGSICTWSRSASELEIPHSITDSSLSAQRIN*GK 148
           A+ K +  +L  G    W ++   L++P  +T+++  A +IN GK
Sbjct: 702 AVLKDDAGVLKAGHEIAWGQAELPLKVPDFVTETAEKAAKINDGK 746


>sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Homo
            sapiens GN=WNK4 PE=1 SV=1
          Length = 1243

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
 Frame = +3

Query: 261  PGIPHQSSY----TVHCLDLNTSSDSCLLTNASSLLYPTPGLNMLGSPIPAHGSPQRFVP 428
            P  P  SS+        L L ++    ++T A SLL P+PGL     P P    P   +P
Sbjct: 907  PPCPSTSSFPSTTAAPLLSLASAFSLAVMTVAQSLLSPSPGLLSQSPPAPPSPLPSLPLP 966

Query: 429  MHQPPG 446
                PG
Sbjct: 967  PPVAPG 972


>sp|Q5RDB8|NPAL1_PONAB NIPA-like protein 1 OS=Pongo abelii GN=NPAL1
           PE=2 SV=1
          Length = 410

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 249 IK*PPGIPHQSSYTVHCLDLNTSSDSCLLTNASSLL 356
           ++ PPG P Q  Y +  +  N+S   C +TN S LL
Sbjct: 5   VRLPPGEPCQEGYVLSLVCPNSSQAWCEITNVSQLL 40


>sp|Q80UE6|WNK4_MOUSE Serine/threonine-protein kinase WNK4 OS=Mus
            musculus GN=Wnk4 PE=1 SV=1
          Length = 1222

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 258  PPGIPHQSSYTVHCLDLNTSSDSCLLTNASSLLYPTPGLNMLGSPIP 398
            PP +P  S+     L L ++    ++T A SLL P+PGL     P P
Sbjct: 894  PPSLP--STTAAPLLSLASAFSLAVMTVAQSLLSPSPGLLSQSPPAP 938


>sp|O74359|MUG60_SCHPO Meiotically up-regulated gene 60 protein
           OS=Schizosaccharomyces pombe GN=mug60 PE=1 SV=1
          Length = 663

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 260 RLFDVFLGHFECPFECYKAAVLACKAGYNVKCRIKDLFSLNLFFVRSM 117
           +L++ ++     PF+CY         G+NV  R    FS NL+ VRS+
Sbjct: 606 KLYNSYIEFSTTPFDCY---------GHNVLIRTPSKFSENLWAVRSL 644
tr_hit_id Q9FLD7
Definition tr|Q9FLD7|Q9FLD7_ARATH Glycosylation enzyme-like protein (Putative uncharacterized protein At5g39990) (At5g39990) OS=Arabidopsis thaliana
Align length 54
Score (bit) 70.5
E-value 4.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920467|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_D09.
         (467 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FLD7|Q9FLD7_ARATH Glycosylation enzyme-like protein (Putati...    70   4e-11
tr|Q9LFQ0|Q9LFQ0_ARATH Putative uncharacterized protein F2G14_17...    69   1e-10
tr|A9T5X9|A9T5X9_PHYPA Predicted protein OS=Physcomitrella paten...    66   8e-10
tr|A9SL72|A9SL72_PHYPA Predicted protein OS=Physcomitrella paten...    65   2e-09
tr|A9TJK5|A9TJK5_PHYPA Predicted protein OS=Physcomitrella paten...    64   3e-09
tr|A9P276|A9P276_PICSI Putative uncharacterized protein OS=Picea...    64   3e-09
tr|A7PML1|A7PML1_VITVI Chromosome chr14 scaffold_21, whole genom...    64   3e-09
tr|A9NUM4|A9NUM4_PICSI Putative uncharacterized protein OS=Picea...    63   6e-09
tr|A7Q2N5|A7Q2N5_VITVI Chromosome chr1 scaffold_46, whole genome...    62   1e-08
tr|Q6RUL1|Q6RUL1_TRIMO Glycosylation enzyme-like protein OS=Trit...    59   1e-07
tr|Q5BHU0|Q5BHU0_WHEAT BGGP Beta-1-3-galactosyl-O-glycosyl-glyco...    59   1e-07
tr|Q5BHS8|Q5BHS8_TRITU BGGP Beta-1-3-galactosyl-O-glycosyl-glyco...    59   1e-07
tr|B6Z261|B6Z261_WHEAT Beta-1-3-galactosyl-o-glycosyl-glycoprote...    59   1e-07
tr|B6SUI5|B6SUI5_MAIZE BGGP Beta-1-3-galactosyl-O-glycosyl-glyco...    59   1e-07
tr|A9T159|A9T159_PHYPA Predicted protein OS=Physcomitrella paten...    59   1e-07
tr|A5AKF8|A5AKF8_VITVI Putative uncharacterized protein OS=Vitis...    59   1e-07
tr|A9NWZ8|A9NWZ8_PICSI Putative uncharacterized protein OS=Picea...    59   2e-07
tr|A7PJ12|A7PJ12_VITVI Chromosome chr13 scaffold_17, whole genom...    58   2e-07
tr|A5BW36|A5BW36_VITVI Putative uncharacterized protein OS=Vitis...    58   2e-07
tr|Q5URW1|Q5URW1_HORVD Putative N-acetylglucosaminyltransferase ...    58   3e-07
tr|A9TUW5|A9TUW5_PHYPA Predicted protein OS=Physcomitrella paten...    58   3e-07
tr|Q5BHU4|Q5BHU4_AEGTA BGGP Beta-1-3-galactosyl-O-glycosyl-glyco...    57   4e-07
tr|Q5BHT6|Q5BHT6_WHEAT BGGP Beta-1-3-galactosyl-O-glycosyl-glyco...    57   4e-07
tr|Q5BHT2|Q5BHT2_TRITU BGGP Beta-1-3-galactosyl-O-glycosyl-glyco...    57   4e-07
tr|Q5BHS4|Q5BHS4_WHEAT BGGP Beta-1-3-galactosyl-O-glycosyl-glyco...    57   4e-07
tr|A7PNL1|A7PNL1_VITVI Chromosome chr8 scaffold_23, whole genome...    57   4e-07
tr|B6UCX5|B6UCX5_MAIZE BGGP Beta-1-3-galactosyl-O-glycosyl-glyco...    57   5e-07
tr|A7NXR7|A7NXR7_VITVI Chromosome chr5 scaffold_2, whole genome ...    56   8e-07
tr|A5AWT6|A5AWT6_VITVI Putative uncharacterized protein OS=Vitis...    56   8e-07
tr|Q9LR71|Q9LR71_ARATH F21B7.14 (Putative glycosylation enzyme) ...    55   1e-06

>tr|Q9FLD7|Q9FLD7_ARATH Glycosylation enzyme-like protein (Putative
           uncharacterized protein At5g39990) (At5g39990)
           OS=Arabidopsis thaliana GN=At5g39990 PE=2 SV=1
          Length = 447

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = -2

Query: 451 VTPGGWCIGTNLWG-DPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           +TPGGWCIG++  G DPCA IGD +++RPG G +RLE LV   LS E FRSKQC
Sbjct: 393 ITPGGWCIGSHENGSDPCAVIGDTDVIRPGPGARRLENLVTSLLSTENFRSKQC 446


>tr|Q9LFQ0|Q9LFQ0_ARATH Putative uncharacterized protein F2G14_170
           (AT5g15050/F2G14_170) (Putative glycosylation enzyme)
           OS=Arabidopsis thaliana GN=F2G14_170 PE=2 SV=1
          Length = 434

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = -2

Query: 451 VTPGGWCIGTNLWG-DPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           VTPGGWCIGT   G DPCA IGD ++++PG+G KR+E L+   LS E FR +QC
Sbjct: 380 VTPGGWCIGTRENGSDPCAVIGDTSVIKPGLGAKRIEKLITYLLSTENFRPRQC 433


>tr|A9T5X9|A9T5X9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_140754 PE=4 SV=1
          Length = 432

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 32/57 (56%), Positives = 38/57 (66%)
 Frame = -2

Query: 463 KKDHVTPGGWCIGTNLWGDPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           KK   TPGGWCIG     DPCA  G+ ++LRPG G +R E LV R LS E FR++QC
Sbjct: 373 KKGQFTPGGWCIGRRHATDPCALRGNHSLLRPGPGSRRFENLVVRMLSAESFRTQQC 429


>tr|A9SL72|A9SL72_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_186148 PE=4 SV=1
          Length = 355

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 31/57 (54%), Positives = 37/57 (64%)
 Frame = -2

Query: 463 KKDHVTPGGWCIGTNLWGDPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           + +  TPGGWCIG N   DPC   GDP +LRPG G +R E LV R L+   FRS+QC
Sbjct: 298 RMNEFTPGGWCIGLN--DDPCGVRGDPTLLRPGPGSRRFEELVVRLLAHPNFRSQQC 352


>tr|A9TJK5|A9TJK5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_170452 PE=4 SV=1
          Length = 389

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 29/52 (55%), Positives = 37/52 (71%)
 Frame = -2

Query: 448 TPGGWCIGTNLWGDPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           TPGGWCIG  +  DPC  IGD ++LRPG G +RL+ L+ R L+   FRS+QC
Sbjct: 336 TPGGWCIG-GVGDDPCTMIGDTSVLRPGPGARRLQGLIERLLAKPRFRSEQC 386


>tr|A9P276|A9P276_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 424

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -2

Query: 448 TPGGWCIGTNLWG-DPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           TPGGWC+G+   G DPCA  GDP + +PG G KRLE L+ + L+ E FR+KQC
Sbjct: 371 TPGGWCVGSRENGRDPCAVRGDPAVFKPGPGDKRLEGLLFKLLAPENFRAKQC 423


>tr|A7PML1|A7PML1_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020862001
           PE=4 SV=1
          Length = 428

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
 Frame = -2

Query: 460 KDHVTPGGWCIGTNLWG-DPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           +D   PGGWCIG+   G DPC+ +G+  ILRPG G KRLE L+   LS E FR +QC
Sbjct: 371 QDMFVPGGWCIGSRKNGSDPCSVVGNSTILRPGPGAKRLENLISSLLSQENFRPRQC 427


>tr|A9NUM4|A9NUM4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 442

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -2

Query: 463 KKDHVTPGGWCIGTNLWG-DPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           K     PGGWCIG    G DPC+ +GD  +L+PG G KRLE L+   LS E FR+KQC
Sbjct: 384 KNGSFVPGGWCIGNRDDGSDPCSVMGDKTVLKPGPGAKRLEKLIVALLSKENFRNKQC 441


>tr|A7Q2N5|A7Q2N5_VITVI Chromosome chr1 scaffold_46, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028955001
           PE=4 SV=1
          Length = 420

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = -2

Query: 463 KKDHVTPGGWCIGTNLWG-DPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           + D + PG WCIG++  G DPC+ +G+P++L+PG G KRLE L+   LS + FR +QC
Sbjct: 362 RPDMLVPGAWCIGSSSNGTDPCSVVGNPSVLKPGPGAKRLENLLVSLLSKQNFRPRQC 419


>tr|Q6RUL1|Q6RUL1_TRIMO Glycosylation enzyme-like protein
           OS=Triticum monococcum GN=109N23.3 PE=4 SV=1
          Length = 425

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -2

Query: 457 DHVTPGGWCIGTNLWG-DPCAGIGDPNILRPGVGYKRLEALVRRQLSDEVFRSKQC 293
           D  TPGGWC GT   G DPC+ +G+ + L+PG G  RL+ LV   LSDE F  +QC
Sbjct: 369 DAPTPGGWCAGTGDNGSDPCSVVGNTSFLQPGRGAVRLQRLVTSLLSDEKFHPRQC 424