BP920468 |
Clone id |
YMU001_000137_D10 |
Library |
YMU01 |
Length |
424 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000137_D10. |
Accession |
BP920468 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL711Contig1 |
Sequence |
CAGGTGGGCCGTTCCCTTGGCTGCTTCTGCAGCTGATTTGGTAGTAGGAATCCCTCTACC CCCTTGTAGCACTATCGTAAATGGATCTGCACAGATTCTTTCGTCTGACAAGTCTGCTAC CGTTGCCGTACATGCAGGTGAACGGTCGGGACGCCCTAAAGTCTCTGACTCCCTAACTAC TCCCATTGTTCAGACATCAACCTACACTTTTACTGATACTGCCCAGCTGATAGCATACCA GGATGGGACTTACAAAAGCTTTGAGTATGGACGGTATGGCAATCCAACAACTCATGCAGC ACAGCAGAACCTAAGTGCGCTTGAGAAGGCTGAAGCAACATTGCTAATGGCCTCTGGCAT GAGTGCAGCAACGACAATGTTACTTGCATTGATGCCTAGTGGTGGTCACATAGTAACCAC TACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P55217 |
Definition |
sp|P55217|METB_ARATH Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana |
Align length |
117 |
Score (bit) |
131.0 |
E-value |
1.0e-30 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T1Q4 |
Definition |
tr|A9T1Q4|A9T1Q4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
115 |
Score (bit) |
162.0 |
E-value |
1.0e-38 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920468|Adiantum capillus-veneris mRNA, clone: YMU001_000137_D10. (424 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T1Q4|A9T1Q4_PHYPA Predicted protein OS=Physcomitrella paten... 162 1e-38 tr|A9S5H9|A9S5H9_PHYPA Predicted protein OS=Physcomitrella paten... 155 7e-37 tr|B8LL39|B8LL39_PICSI Putative uncharacterized protein OS=Picea... 148 1e-34 tr|A8J355|A8J355_CHLRE Cystathionine gamma-synthase OS=Chlamydom... 141 1e-32 tr|B4F935|B4F935_MAIZE Putative uncharacterized protein OS=Zea m... 140 4e-32 tr|O04982|O04982_MAIZE Cystathionine gamma-synthase OS=Zea mays ... 139 9e-32 tr|O04981|O04981_MAIZE Cystathionine gamma-synthase OS=Zea mays ... 138 1e-31 tr|A4S2B4|A4S2B4_OSTLU Cystathione gamma synthase OS=Ostreococcu... 137 3e-31 tr|Q8S7G4|Q8S7G4_ORYSA Putative cystathionine gamma synthase OS=... 135 1e-30 tr|Q9ZPL5|Q9ZPL5_TOBAC Cystathionine gamma-synthase OS=Nicotiana... 134 2e-30 tr|O23944|O23944_FRAVE Cystathionine gamma synthase OS=Fragaria ... 132 8e-30 tr|Q9MT29|Q9MT29_SOLTU Cystathionine gamma-synthase isoform 2 OS... 132 1e-29 tr|Q9MT30|Q9MT30_SOLTU Cystathionine gamma-synthase isoform 1 OS... 129 5e-29 tr|Q6R8F6|Q6R8F6_SOLLC Cystathionine gamma synthase OS=Solanum l... 129 5e-29 tr|O81334|O81334_MESCR Cystathionine gamma-synthase OS=Mesembrya... 129 9e-29 tr|A7PMZ2|A7PMZ2_VITVI Chromosome chr14 scaffold_21, whole genom... 127 3e-28 tr|Q9XFG0|Q9XFG0_SOYBN Cystathionine-gamma-synthase OS=Glycine m... 121 2e-26 tr|Q10KP4|Q10KP4_ORYSJ Cys/Met metabolism PLP-dependent enzyme f... 119 6e-26 tr|Q0GC25|Q0GC25_MEDSA Cystathionine gamma-synthase OS=Medicago ... 118 1e-25 tr|A2Z703|A2Z703_ORYSI Putative uncharacterized protein OS=Oryza... 118 1e-25 tr|Q94I44|Q94I44_ORYSJ Os10g0399200 protein OS=Oryza sativa subs... 117 3e-25 tr|Q94I39|Q94I39_ORYSJ Os10g0399700 protein OS=Oryza sativa subs... 114 2e-24 tr|A2Z705|A2Z705_ORYSI Putative uncharacterized protein OS=Oryza... 114 2e-24 tr|Q94I45|Q94I45_ORYSJ Putative O-succinylhomoserine (Thiol)-lya... 114 2e-24 tr|Q338K0|Q338K0_ORYSJ Cys/Met metabolism PLP-dependent enzyme f... 114 2e-24 tr|A3C4H7|A3C4H7_ORYSJ Putative uncharacterized protein OS=Oryza... 114 2e-24 tr|A2Z702|A2Z702_ORYSI Putative uncharacterized protein OS=Oryza... 114 2e-24 tr|A2Z701|A2Z701_ORYSI Putative uncharacterized protein OS=Oryza... 114 2e-24 tr|Q9SPT6|Q9SPT6_SOLTU Cystathionine-gamma-synthase OS=Solanum t... 112 1e-23 tr|A9WAC7|A9WAC7_CHLAA Cystathionine gamma-synthase OS=Chlorofle... 107 2e-22
>tr|A9T1Q4|A9T1Q4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_138984 PE=3 SV=1 Length = 532
Score = 162 bits (409), Expect = 1e-38 Identities = 80/115 (69%), Positives = 96/115 (83%) Frame = +2
Query: 80 NGSAQILSSDKSATVAVHAGERSGRPKVSDSLTTPIVQTSTYTFTDTAQLIAYQDGTYKS 259 + A+ S K +T+AVH GER+ RPKV D+LT PI QTSTYTF DTA+LIA+Q+GT+ S Sbjct: 133 SSEAKKSSRSKPSTLAVHGGERTRRPKVQDTLTIPICQTSTYTFKDTAELIAFQEGTFTS 192
Query: 260 FEYGRYGNPTTHAAQQNLSALEKAEATLLMASGMSAATTMLLALMPSGGHIVTTT 424 FEYGRYGNPTT+A ++ +SALE AEATLL ASGM AATTMLLAL+P+GGHIVTTT Sbjct: 193 FEYGRYGNPTTNAVEEKISALEGAEATLLSASGMCAATTMLLALVPAGGHIVTTT 247
>tr|A9S5H9|A9S5H9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_124339 PE=3 SV=1 Length = 526
Score = 155 bits (393), Expect = 7e-37 Identities = 77/105 (73%), Positives = 90/105 (85%) Frame = +2
Query: 110 KSATVAVHAGERSGRPKVSDSLTTPIVQTSTYTFTDTAQLIAYQDGTYKSFEYGRYGNPT 289 KS+T+AVH GE RPKV D+LT PI QTSTYTF DTA+LIA+Q+GT+ SFEYGRYGNPT Sbjct: 137 KSSTLAVHGGEWLLRPKVQDTLTIPICQTSTYTFKDTAELIAFQEGTFTSFEYGRYGNPT 196
Query: 290 THAAQQNLSALEKAEATLLMASGMSAATTMLLALMPSGGHIVTTT 424 T+A ++ +SALE AE TLL ASGM AATTMLLAL+P+GGHIVTTT Sbjct: 197 TNAVEEKISALEGAETTLLSASGMCAATTMLLALVPAGGHIVTTT 241
>tr|B8LL39|B8LL39_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 521
Score = 148 bits (374), Expect = 1e-34 Identities = 68/102 (66%), Positives = 90/102 (88%) Frame = +2
Query: 119 TVAVHAGERSGRPKVSDSLTTPIVQTSTYTFTDTAQLIAYQDGTYKSFEYGRYGNPTTHA 298 T+AVH+GE++GR V+D++ TPIVQTSTYTF +TA+LIA+Q+G + S+EYGRYGNPTT Sbjct: 135 TLAVHSGEKTGRAIVTDAIATPIVQTSTYTFKNTAELIAFQEGRHISYEYGRYGNPTTQV 194
Query: 299 AQQNLSALEKAEATLLMASGMSAATTMLLALMPSGGHIVTTT 424 A++ +SALE+AE TLL+ASGM A TTM+LAL+P+GGHI+TTT Sbjct: 195 AEEKISALERAETTLLLASGMCATTTMMLALLPAGGHIITTT 236
>tr|A8J355|A8J355_CHLRE Cystathionine gamma-synthase OS=Chlamydomonas reinhardtii GN=CGS1 PE=3 SV=1 Length = 466
Score = 141 bits (356), Expect = 1e-32 Identities = 71/125 (56%), Positives = 92/125 (73%), Gaps = 2/125 (1%) Frame = +2
Query: 56 LPPCSTIVNGSAQI--LSSDKSATVAVHAGERSGRPKVSDSLTTPIVQTSTYTFTDTAQL 229 L P S NG+ + + K +T AVH GER GRP+V+D+LTTPIVQTSTY F +TA+L Sbjct: 56 LEPTSASSNGAPKNNGVQFTKLSTTAVHGGERGGRPRVADALTTPIVQTSTYHFRNTAEL 115
Query: 230 IAYQDGTYKSFEYGRYGNPTTHAAQQNLSALEKAEATLLMASGMSAATTMLLALMPSGGH 409 I Y +G + S+EYGRYGNPT A + + ALE AE L+ ASGM+A T+MLL+L+P+GGH Sbjct: 116 IEYNEGRFDSYEYGRYGNPTAQACENKIKALEGAEDCLVSASGMNAVTSMLLSLVPAGGH 175
Query: 410 IVTTT 424 IVTT+ Sbjct: 176 IVTTS 180
>tr|B4F935|B4F935_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 481
Score = 140 bits (352), Expect = 4e-32 Identities = 76/143 (53%), Positives = 101/143 (70%), Gaps = 3/143 (2%) Frame = +2
Query: 5 WAVPLAASAADLVVGIP---LPPCSTIVNGSAQILSSDKSATVAVHAGERSGRPKVSDSL 175 W+ AASAA V IP + S +V +L SD A++AVHAGER GR +D++ Sbjct: 57 WSDCPAASAAAEVSAIPNAKVAQPSAVVLAERNLLGSD--ASLAVHAGERLGRRIATDAI 114
Query: 176 TTPIVQTSTYTFTDTAQLIAYQDGTYKSFEYGRYGNPTTHAAQQNLSALEKAEATLLMAS 355 TTP+V TS Y F ++ +LI +++G + SFEYGRYGNPTT A ++ +SALEKAE+T+ +AS Sbjct: 115 TTPVVNTSAYWFNNSQELIDFKEGRHASFEYGRYGNPTTEALEKKMSALEKAESTVFVAS 174
Query: 356 GMSAATTMLLALMPSGGHIVTTT 424 GM AA ML AL+P+GGHIVTTT Sbjct: 175 GMYAAVAMLSALVPAGGHIVTTT 197
>tr|O04982|O04982_MAIZE Cystathionine gamma-synthase OS=Zea mays GN=CGS1 PE=3 SV=1 Length = 509
Score = 139 bits (349), Expect = 9e-32 Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 3/138 (2%) Frame = +2
Query: 20 AASAADLVVGIP---LPPCSTIVNGSAQILSSDKSATVAVHAGERSGRPKVSDSLTTPIV 190 AASAA V IP + S +V +L SD A++AVHAGER GR +D++TTP+V Sbjct: 90 AASAAAEVSAIPNAKVAQPSAVVLAERNLLGSD--ASLAVHAGERLGRRIATDAITTPVV 147
Query: 191 QTSTYTFTDTAQLIAYQDGTYKSFEYGRYGNPTTHAAQQNLSALEKAEATLLMASGMSAA 370 TS Y F ++ +LI +++G + SFEYGRYGNPTT A ++ +SALEKAE+T+ +ASGM AA Sbjct: 148 NTSAYWFNNSQELIDFKEGRHASFEYGRYGNPTTEALEKKMSALEKAESTVFVASGMYAA 207
Query: 371 TTMLLALMPSGGHIVTTT 424 ML AL+P+GGHIVTTT Sbjct: 208 AAMLSALVPAGGHIVTTT 225
>tr|O04981|O04981_MAIZE Cystathionine gamma-synthase OS=Zea mays GN=CGS1 PE=2 SV=1 Length = 509
Score = 138 bits (348), Expect = 1e-31 Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 3/138 (2%) Frame = +2
Query: 20 AASAADLVVGIP---LPPCSTIVNGSAQILSSDKSATVAVHAGERSGRPKVSDSLTTPIV 190 AASAA V IP + S +V +L SD A++AVHAGER GR +D++TTP+V Sbjct: 90 AASAAADVSAIPNAKVAQPSAVVLAERNLLGSD--ASLAVHAGERLGRRIATDAITTPVV 147
Query: 191 QTSTYTFTDTAQLIAYQDGTYKSFEYGRYGNPTTHAAQQNLSALEKAEATLLMASGMSAA 370 TS Y F ++ +LI +++G + SFEYGRYGNPTT A ++ +SALEKAE+T+ +ASGM AA Sbjct: 148 NTSAYWFNNSQELIDFKEGRHASFEYGRYGNPTTEALEKKMSALEKAESTVFVASGMYAA 207
Query: 371 TTMLLALMPSGGHIVTTT 424 ML AL+P+GGHIVTTT Sbjct: 208 VAMLSALVPAGGHIVTTT 225
>tr|A4S2B4|A4S2B4_OSTLU Cystathione gamma synthase OS=Ostreococcus lucimarinus (strain CCE9901) GN=CGS1 PE=3 SV=1 Length = 433
Score = 137 bits (344), Expect = 3e-31 Identities = 71/104 (68%), Positives = 80/104 (76%), Gaps = 1/104 (0%) Frame = +2
Query: 116 ATVAVHAGERS-GRPKVSDSLTTPIVQTSTYTFTDTAQLIAYQDGTYKSFEYGRYGNPTT 292 +T V GER GRP+VSDSLTTPIV TSTY F DT +LIAYQ+G Y SFEYGRYGNPTT Sbjct: 45 STQCVQNGERKEGRPRVSDSLTTPIVCTSTYHFKDTEELIAYQEGRYGSFEYGRYGNPTT 104
Query: 293 HAAQQNLSALEKAEATLLMASGMSAATTMLLALMPSGGHIVTTT 424 A ++ + LE E LL ASGM ATTMLLAL+P+GGHIVTTT Sbjct: 105 KACEEKIRQLEGGEDALLSASGMCTATTMLLALVPAGGHIVTTT 148
>tr|Q8S7G4|Q8S7G4_ORYSA Putative cystathionine gamma synthase OS=Oryza sativa GN=OSJNBb0048D20.9 PE=3 SV=1 Length = 446
Score = 135 bits (340), Expect = 1e-30 Identities = 67/120 (55%), Positives = 90/120 (75%) Frame = +2
Query: 65 CSTIVNGSAQILSSDKSATVAVHAGERSGRPKVSDSLTTPIVQTSTYTFTDTAQLIAYQD 244 CS I G AQI A++AVHAGER GR +D++TTP+V TS Y F ++ +LI +++ Sbjct: 45 CSNI--GVAQIALLGSDASLAVHAGERLGRRIATDAITTPVVNTSAYWFNNSQELIDFKE 102
Query: 245 GTYKSFEYGRYGNPTTHAAQQNLSALEKAEATLLMASGMSAATTMLLALMPSGGHIVTTT 424 G + SFEYGRYGNPTT A ++ +SALEKAE+T+ +ASGM A+ ML AL+P+GGH+VTTT Sbjct: 103 GRHASFEYGRYGNPTTEALEKKMSALEKAESTVFVASGMYASVAMLSALVPAGGHVVTTT 162
>tr|Q9ZPL5|Q9ZPL5_TOBAC Cystathionine gamma-synthase OS=Nicotiana tabacum GN=metB PE=1 SV=1 Length = 445
Score = 134 bits (337), Expect = 2e-30 Identities = 69/112 (61%), Positives = 87/112 (77%) Frame = +2
Query: 89 AQILSSDKSATVAVHAGERSGRPKVSDSLTTPIVQTSTYTFTDTAQLIAYQDGTYKSFEY 268 A L+SD S VA+HAGER GR V+D++TTP+V TS Y F T++LI +++ SFEY Sbjct: 51 ASFLNSDGS--VAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEY 108
Query: 269 GRYGNPTTHAAQQNLSALEKAEATLLMASGMSAATTMLLALMPSGGHIVTTT 424 GRYGNPTT ++ +SALE AE+TLLMASGM A+T MLLAL+P+GGHIVTTT Sbjct: 109 GRYGNPTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTT 160
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