| BP920469 |
| Clone id |
YMU001_000137_D11 |
| Library |
YMU01 |
| Length |
312 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000137_D11. |
| Accession |
BP920469 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL771Contig1 |
| Sequence |
ACCTTCAATGCTAACTGGCGGAGAGTTGCGGCCATACCAACTCGAAGGCCTCCAGTGGAT
GCTCTCTCTTTATAATAACAATTTGAATGGTATTTTGGCTGATGAGATGGGCCTAGGAAA
AACCATTCAAACTATTGCTTTACTATCTTACCTGATGGAAAACAAGAGATTGTCTGGCCC
CCACCTTATTATAGCCCCAAAGGCAGTTTTGCCCAATTGGGATCACGAATTCAGAACTTG
GACTCCAAGCATTGTTGCAGTGTTGTATGATGGAAATCGCTTGGAACGCAAAGGCATACG
AGAGATATACAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P51531 |
| Definition |
sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens |
| Align length |
98 |
| Score (bit) |
134.0 |
| E-value |
1.0e-31 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7NWI8 |
| Definition |
tr|A7NWI8|A7NWI8_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
101 |
| Score (bit) |
171.0 |
| E-value |
2.0e-41 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920469|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_D11.
(312 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7NWI8|A7NWI8_VITVI Chromosome chr5 scaffold_2, whole genome ... 171 2e-41
tr|A5ASC6|A5ASC6_VITVI Putative uncharacterized protein OS=Vitis... 171 2e-41
tr|Q60EX7|Q60EX7_ORYSJ Os05g0144300 protein OS=Oryza sativa subs... 168 1e-40
tr|A3AZW2|A3AZW2_ORYSJ Putative uncharacterized protein OS=Oryza... 168 1e-40
tr|A2Y0B5|A2Y0B5_ORYSI Putative uncharacterized protein OS=Oryza... 168 1e-40
tr|A9S7V7|A9S7V7_PHYPA Chromatin remodeling complex SWI/SNF prot... 166 7e-40
tr|Q9SFG5|Q9SFG5_ARATH Putative transcriptional regulator OS=Ara... 163 4e-39
tr|Q3E9C2|Q3E9C2_ARATH Uncharacterized protein At5g19310.1 OS=Ar... 157 2e-37
tr|B6KPM5|B6KPM5_TOXGO SNF2 family N-terminal domain-containing ... 144 2e-33
tr|B6AJZ0|B6AJZ0_9CRYT SNF2 family helicase, putative OS=Cryptos... 138 1e-31
tr|Q90755|Q90755_CHICK BRM protein OS=Gallus gallus GN=brm PE=2 ... 135 8e-31
tr|B6K7N8|B6K7N8_SCHJP SNF2 family ATP-dependent chromatin-remod... 135 1e-30
tr|Q7TND4|Q7TND4_MOUSE Smarca2 protein (Fragment) OS=Mus musculu... 134 2e-30
tr|Q6DIC0|Q6DIC0_MOUSE Smarca2 protein OS=Mus musculus GN=Smarca... 134 2e-30
tr|Q3UHL2|Q3UHL2_MOUSE Putative uncharacterized protein OS=Mus m... 134 2e-30
tr|A5PKK5|A5PKK5_BOVIN SMARCA2 protein OS=Bos taurus GN=SMARCA2 ... 134 2e-30
tr|A9VAE6|A9VAE6_MONBE Predicted protein OS=Monosiga brevicollis... 134 2e-30
tr|B4DK35|B4DK35_HUMAN cDNA FLJ61591, highly similar to Probable... 134 2e-30
tr|A7RK66|A7RK66_NEMVE Predicted protein OS=Nematostella vectens... 134 3e-30
tr|Q55C32|Q55C32_DICDI SNF2-related domain-containing protein OS... 133 4e-30
tr|Q6C828|Q6C828_YARLI YALI0D23287p OS=Yarrowia lipolytica GN=YA... 133 5e-30
tr|Q7ZSY3|Q7ZSY3_DANRE Brahma protein-like protein 1 OS=Danio re... 132 7e-30
tr|Q4T3E8|Q4T3E8_TETNG Chromosome 18 SCAF10091, whole genome sho... 132 9e-30
tr|Q5CVY6|Q5CVY6_CRYPV Brahma like protein with a HSA domain, SN... 132 9e-30
tr|A8QEY4|A8QEY4_BRUMA BRM protein, putative OS=Brugia malayi GN... 132 1e-29
tr|Q4RV11|Q4RV11_TETNG Chromosome 12 SCAF14993, whole genome sho... 131 1e-29
tr|B8MR98|B8MR98_9EURO RSC complex subunit (Sth1), putative OS=T... 131 1e-29
tr|B6Q1R2|B6Q1R2_PENMA RSC complex subunit (Sth1), putative OS=P... 131 1e-29
tr|B2VV70|B2VV70_PYRTR SNF2 family ATP-dependent chromatin-remod... 131 1e-29
tr|A8Q0N1|A8Q0N1_MALGO Putative uncharacterized protein OS=Malas... 131 2e-29
>tr|A7NWI8|A7NWI8_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019937001
PE=4 SV=1
Length = 1077
Score = 171 bits (433), Expect = 2e-41
Identities = 80/101 (79%), Positives = 91/101 (90%)
Frame = +2
Query: 2 PSMLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGP 181
P+ML GGELRPYQLEGLQWMLSL+NNNLNGILADEMGLGKTIQTI+L++YL+ENK ++GP
Sbjct: 362 PAMLQGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLVENKGVTGP 421
Query: 182 HLIIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKGIRE 304
HLI+APKAVLPNW +EF TW PSI AVLYDG ERK +RE
Sbjct: 422 HLIVAPKAVLPNWVNEFSTWAPSIAAVLYDGRLDERKALRE 462
>tr|A5ASC6|A5ASC6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_012191 PE=4 SV=1
Length = 568
Score = 171 bits (433), Expect = 2e-41
Identities = 80/101 (79%), Positives = 91/101 (90%)
Frame = +2
Query: 2 PSMLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGP 181
P+ML GGELRPYQLEGLQWMLSL+NNNLNGILADEMGLGKTIQTI+L++YL+ENK ++GP
Sbjct: 377 PAMLQGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLVENKGVTGP 436
Query: 182 HLIIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKGIRE 304
HLI+APKAVLPNW +EF TW PSI AVLYDG ERK +RE
Sbjct: 437 HLIVAPKAVLPNWVNEFSTWAPSIAAVLYDGRLDERKALRE 477
>tr|Q60EX7|Q60EX7_ORYSJ Os05g0144300 protein OS=Oryza sativa subsp.
japonica GN=OJ1607_F09.9 PE=4 SV=1
Length = 1128
Score = 168 bits (426), Expect = 1e-40
Identities = 78/101 (77%), Positives = 89/101 (88%)
Frame = +2
Query: 2 PSMLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGP 181
PS L GGELRPYQLEGLQWMLSL+NNNLNGILADEMGLGKTIQTIAL++YL+E K ++GP
Sbjct: 433 PSALEGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEKKEVTGP 492
Query: 182 HLIIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKGIRE 304
HLIIAPKAVLPNW +EF+TW PSI +LYDG +RK +RE
Sbjct: 493 HLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPDDRKALRE 533
>tr|A3AZW2|A3AZW2_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_016334 PE=4 SV=1
Length = 1087
Score = 168 bits (426), Expect = 1e-40
Identities = 78/101 (77%), Positives = 89/101 (88%)
Frame = +2
Query: 2 PSMLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGP 181
PS L GGELRPYQLEGLQWMLSL+NNNLNGILADEMGLGKTIQTIAL++YL+E K ++GP
Sbjct: 457 PSALEGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEKKEVTGP 516
Query: 182 HLIIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKGIRE 304
HLIIAPKAVLPNW +EF+TW PSI +LYDG +RK +RE
Sbjct: 517 HLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPDDRKALRE 557
>tr|A2Y0B5|A2Y0B5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_18430 PE=4 SV=1
Length = 1088
Score = 168 bits (426), Expect = 1e-40
Identities = 78/101 (77%), Positives = 89/101 (88%)
Frame = +2
Query: 2 PSMLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGP 181
PS L GGELRPYQLEGLQWMLSL+NNNLNGILADEMGLGKTIQTIAL++YL+E K ++GP
Sbjct: 458 PSALEGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEKKEVTGP 517
Query: 182 HLIIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKGIRE 304
HLIIAPKAVLPNW +EF+TW PSI +LYDG +RK +RE
Sbjct: 518 HLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPDDRKALRE 558
>tr|A9S7V7|A9S7V7_PHYPA Chromatin remodeling complex SWI/SNF protein
OS=Physcomitrella patens subsp. patens GN=CHR1546 PE=4
SV=1
Length = 1289
Score = 166 bits (419), Expect = 7e-40
Identities = 79/103 (76%), Positives = 86/103 (83%)
Frame = +2
Query: 2 PSMLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGP 181
P ML GG+LR YQ+EGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYL+ENK + GP
Sbjct: 538 PKMLQGGQLRAYQIEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLLENKGVVGP 597
Query: 182 HLIIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKGIREIY 310
H+IIAPKAVLPNW HE TW P I VLYDG ER+ +RE Y
Sbjct: 598 HIIIAPKAVLPNWAHELSTWAPGIQTVLYDGRAEERRLLREEY 640
>tr|Q9SFG5|Q9SFG5_ARATH Putative transcriptional regulator
OS=Arabidopsis thaliana GN=At3g06010 PE=4 SV=1
Length = 1132
Score = 163 bits (413), Expect = 4e-39
Identities = 77/101 (76%), Positives = 88/101 (87%)
Frame = +2
Query: 2 PSMLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGP 181
PS+L GGELR YQLEGLQWM+SL+NNNLNGILADEMGLGKTIQTI+L++YL+ENK + GP
Sbjct: 425 PSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGP 484
Query: 182 HLIIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKGIRE 304
+LI+APKAVLPNW +EF TW PSI A LYDG ERK IRE
Sbjct: 485 YLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIRE 525
>tr|Q3E9C2|Q3E9C2_ARATH Uncharacterized protein At5g19310.1
OS=Arabidopsis thaliana GN=At5g19310 PE=4 SV=1
Length = 1064
Score = 157 bits (398), Expect = 2e-37
Identities = 74/100 (74%), Positives = 87/100 (87%)
Frame = +2
Query: 2 PSMLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGP 181
PS+L GGELR YQLEGLQWM+SLYNN+ NGILADEMGLGKTIQTIAL++YL+E+K L GP
Sbjct: 378 PSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGP 437
Query: 182 HLIIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKGIR 301
HLI+APKAVLPNW++EF W PSI A LYDG++ +R IR
Sbjct: 438 HLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR 477
>tr|B6KPM5|B6KPM5_TOXGO SNF2 family N-terminal domain-containing
protein OS=Toxoplasma gondii ME49 GN=TGME49_120300 PE=4
SV=1
Length = 1606
Score = 144 bits (363), Expect = 2e-33
Identities = 69/100 (69%), Positives = 80/100 (80%)
Frame = +2
Query: 2 PSMLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGP 181
PS LTGG+L PYQ+ GL WMLSLYNN+L+GILADEMGLGKTIQTIALL+YL E K SGP
Sbjct: 682 PSTLTGGDLMPYQMAGLSWMLSLYNNDLHGILADEMGLGKTIQTIALLAYLKEFKNNSGP 741
Query: 182 HLIIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKGIR 301
HLIIAP + LPNW EFR W PS+ V+ G RLER+ ++
Sbjct: 742 HLIIAPLSTLPNWADEFRRWCPSLKVVVLKGGRLERRELQ 781
>tr|B6AJZ0|B6AJZ0_9CRYT SNF2 family helicase, putative
OS=Cryptosporidium muris RN66 GN=CMU_003700 PE=4 SV=1
Length = 1313
Score = 138 bits (348), Expect = 1e-31
Identities = 66/101 (65%), Positives = 80/101 (79%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 MLTGGELRPYQLEGLQWMLSLYNNNLNGILADEMGLGKTIQTIALLSYLMENKRLSGPHL 187
+L GGEL PYQ+ G++WMLSLYNNNL+GILADEMGLGKTIQTIALL+YL E+K GPHL
Sbjct: 488 LLVGGELLPYQIVGVEWMLSLYNNNLHGILADEMGLGKTIQTIALLTYLYEHKNNYGPHL 547
Query: 188 IIAPKAVLPNWDHEFRTWTPSIVAVLYDGNRLERKG-IREI 307
I+ P + LPNW EF W+PS+ + + GNR ERK IRE+
Sbjct: 548 IVVPLSTLPNWLKEFNIWSPSLKLLCFKGNRYERKNLIREL 588
|