BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920470|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_D12.
         (551 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q92KW1|MNME_RHIME tRNA modification GTPase mnmE OS=Rhizobium ...    33   0.92 
sp|P09084|PAX1_MOUSE Paired box protein Pax-1 OS=Mus musculus GN...    32   2.7  
sp|Q2WEA5|TRPM1_RAT Transient receptor potential cation channel ...    31   4.6  
sp|P14685|PSMD3_MOUSE 26S proteasome non-ATPase regulatory subun...    31   4.6  
sp|P15863|PAX1_HUMAN Paired box protein Pax-1 OS=Homo sapiens GN...    31   4.6  
sp|Q1A1A1|FOXG1_CERSI Forkhead box protein G1 OS=Ceratotherium s...    25   8.2  

>sp|Q92KW1|MNME_RHIME tRNA modification GTPase mnmE OS=Rhizobium
           meliloti GN=mnmE PE=3 SV=2
          Length = 439

 Score = 33.1 bits (74), Expect = 0.92
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
 Frame = +2

Query: 8   LAPRKLSLRAKVGGTKIDKLVEQTEEAAEKV*MGEIISNRSTWKFTEREGLRASK---AG 178
           LA R +++  +V GT  D L      A   V + +    R T +  EREG+R ++   A 
Sbjct: 237 LARRDIAIVTEVAGTTRDVLSVDLSLAGFSVKLFDTAGLRETDELVEREGIRRARQVIAD 296

Query: 179 EHAGKIFNEGKGH-RCGEIFMEPSPV----------SPPWLPLRVLLIATCGAGGG 313
                + +E  GH R  E+  E  PV          SP W P    +  +   G G
Sbjct: 297 ADLVLLLSEKPGHFRIDEVLPENVPVIRVATKVDRPSPSWAPSDADIFLSTRTGEG 352


>sp|P09084|PAX1_MOUSE Paired box protein Pax-1 OS=Mus musculus
           GN=Pax1 PE=1 SV=3
          Length = 361

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 17/96 (17%)
 Frame = -3

Query: 447 WPALETSTLNGICSMYFTIVSSHLSKIVRKL-----------------QAPYLVF*SMWQ 319
           W   +    +G+C  Y     S +S+I+R                     P L +  ++Q
Sbjct: 100 WEIRDRLLADGVCDKYNVPSVSSISRILRNKIGSLAQPGPYEASKQPPPQPALPYNHIYQ 159

Query: 318 YPPPPAPQVAMSSTRKGSHGGDTGEGSMKISPHLWP 211
           YP P    V+ + T+ G+H G  G       P  WP
Sbjct: 160 YPYPSP--VSPTGTKMGTHPGVPGSAGHVSIPRSWP 193


>sp|Q2WEA5|TRPM1_RAT Transient receptor potential cation channel
           subfamily M member 1 OS=Rattus norvegicus GN=Trpm1 PE=2
           SV=1
          Length = 1628

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 309 PPAPQVAMSSTRKGSHGGDTGEGSMKISPHLWPFPS 202
           PP P V  SST + +  GD   G   +S H   +P+
Sbjct: 64  PPLPSVTPSSTAEDTKQGDAQSGKWSVSKHTQSYPT 99


>sp|P14685|PSMD3_MOUSE 26S proteasome non-ATPase regulatory subunit
           3 OS=Mus musculus GN=Psmd3 PE=2 SV=2
          Length = 530

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 321 QYPPPPAPQVAMSSTRKGSHGGDTGEGSMK 232
           Q PPPPAPQ         +  G TGEG  K
Sbjct: 23  QEPPPPAPQDVEMKEEAAAGSGSTGEGDGK 52


>sp|P15863|PAX1_HUMAN Paired box protein Pax-1 OS=Homo sapiens
           GN=PAX1 PE=2 SV=3
          Length = 440

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 17/96 (17%)
 Frame = -3

Query: 447 WPALETSTLNGICSMYFTIVSSHLSKIVRKL-----------------QAPYLVF*SMWQ 319
           W   +    +G+C  Y     S +S+I+R                     P L +  ++Q
Sbjct: 100 WEIRDRLLADGVCDKYNVPSVSSISRILRNKIGSLAQPGPYEASKQPPSQPTLPYNHIYQ 159

Query: 318 YPPPPAPQVAMSSTRKGSHGGDTGEGSMKISPHLWP 211
           YP P    V+ +  + GSH G  G       P  WP
Sbjct: 160 YPYPSP--VSPTGAKMGSHPGVPGTAGHVSIPRSWP 193


>sp|Q1A1A1|FOXG1_CERSI Forkhead box protein G1 OS=Ceratotherium
           simum GN=FOXG1 PE=3 SV=1
          Length = 486

 Score = 25.4 bits (54), Expect(2) = 8.2
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 6/30 (20%)
 Frame = -3

Query: 315 PPPPAPQVAMSSTR------KGSHGGDTGE 244
           PPPP P  A+   +      KG  GG  GE
Sbjct: 104 PPPPPPAAALDGAKADGLGGKGEPGGGPGE 133



 Score = 22.3 bits (46), Expect(2) = 8.2
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 318 YPPPPAPQ 295
           +PPPPAPQ
Sbjct: 57  HPPPPAPQ 64

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920470|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_D12.
         (551 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q299X1|Q299X1_DROPS GA12858 OS=Drosophila pseudoobscura pseud...    34   5.9  
tr|B6KGL3|B6KGL3_TOXGO Putative uncharacterized protein OS=Toxop...    34   5.9  
tr|B4G391|B4G391_DROPE GL24437 OS=Drosophila persimilis GN=GL244...    34   5.9  
tr|Q0G0W2|Q0G0W2_9RHIZ Metalloprotease (Cell division protein) F...    33   10.0 
tr|B6KI51|B6KI51_TOXGO PHD-zinc finger (C3HC4 type) protein, put...    33   10.0 

>tr|Q299X1|Q299X1_DROPS GA12858 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA12858 PE=4 SV=2
          Length = 214

 Score = 33.9 bits (76), Expect = 5.9
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 303 APQVAMSSTRKGS-HGGDTGEGSMKISPHLW 214
           AP + M++   G+ HG +T  GS+ + PHLW
Sbjct: 167 APSIGMAALGNGNGHGNETSAGSVSVMPHLW 197


>tr|B6KGL3|B6KGL3_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_045560 PE=4 SV=1
          Length = 2009

 Score = 33.9 bits (76), Expect = 5.9
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +2

Query: 71  EQTEEAAEKV*MGEIISNRSTWKFTE-------REGLRASKAGEHAGKIFNEGKGHRCGE 229
           +QTEE  ++   G   +   T + TE       +E  R  K GEH G+  ++GKG R  E
Sbjct: 248 KQTEEETKETHTGTTETQEETTETTEEARKEGAKERCRGEKTGEHKGRSASQGKGRRDAE 307


>tr|B4G391|B4G391_DROPE GL24437 OS=Drosophila persimilis GN=GL24437
           PE=4 SV=1
          Length = 214

 Score = 33.9 bits (76), Expect = 5.9
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 303 APQVAMSSTRKGS-HGGDTGEGSMKISPHLW 214
           AP + M++   G+ HG +T  GS+ + PHLW
Sbjct: 167 APSIGMAALGNGNGHGNETSAGSVSVMPHLW 197


>tr|Q0G0W2|Q0G0W2_9RHIZ Metalloprotease (Cell division protein) FtsH
           OS=Fulvimarina pelagi HTCC2506 GN=FP2506_18354 PE=4 SV=1
          Length = 644

 Score = 33.1 bits (74), Expect = 10.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 315 PPPPAPQVAMSSTRKGSHGGDTGEGSMKISP 223
           PP     +  + T + SHGG+TGEG M+  P
Sbjct: 613 PPSRGSSIPKAGTSRPSHGGETGEGGMEPQP 643


>tr|B6KI51|B6KI51_TOXGO PHD-zinc finger (C3HC4 type) protein,
           putative OS=Toxoplasma gondii ME49 GN=TGME49_004140 PE=4
           SV=1
          Length = 2139

 Score = 33.1 bits (74), Expect = 10.0
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +3

Query: 126 GRRGNLQREKG*ERAKQESTRAKFSTKERATGAEKSSWSPHLCLHHGYPCGCCSLPPAE 302
           G+R  ++ +   E   Q +TRA  S K    G++K + +  L L     C CC LPP E
Sbjct: 54  GKRAKIETQHIGEHGLQ-TTRADLSQKTGDCGSDKETKTKLLWLSARRRCACCLLPPQE 111