| BP920475 |
| Clone id |
YMU001_000137_E06 |
| Library |
YMU01 |
| Length |
400 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000137_E06. |
| Accession |
BP920475 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1317Contig1 |
| Sequence |
CAGAGTCTACTAGAACATGCCCATAATTAACAGCGAGGGTTAGGGTTAGTGCTCTGCTAG CGATGGTTAACTCCTTAACCTCGCCGCACCTGCCCGAGTAGGGCAGGATGTTCCCAGCGT CTTTTCCCTTGCGCCCTCCTCTCCAATTGCATGCGTCACCCACTGGCAATGCATGGGATG CAGCCAATGCGCTACCGCACCGTACCTCTCTCTTGCTTCCAAACGTTCCATCCGCACATT TGGCCCCAATCGGGCCCCCTCAGGTCTTGTCATCGTCGGACCCTCCCATCACAAAGGTTC TACCACCTGAGTTAGCAGAAAAGCTTGTTCAAGCTCTCACTGCTCGGCATCAGCTCTTAT CAAGTAAATCCCCTGCTTGTGATGGTGACCACTCTCACCG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q91V98 |
| Definition |
sp|Q91V98|CD248_MOUSE Endosialin OS=Mus musculus |
| Align length |
120 |
| Score (bit) |
39.7 |
| E-value |
0.005 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920475|Adiantum capillus-veneris mRNA, clone: YMU001_000137_E06. (400 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q91V98|CD248_MOUSE Endosialin OS=Mus musculus GN=Cd248 PE=2 SV=1 40 0.005 sp|Q8BI84|MIA3_MOUSE Melanoma inhibitory activity protein 3 OS=M... 34 0.26 sp|Q0P5M0|PRR19_BOVIN Proline-rich protein 19 OS=Bos taurus GN=P... 33 0.34 sp|Q01705|NOTC1_MOUSE Neurogenic locus notch homolog protein 1 O... 33 0.34 sp|Q99988|GDF15_HUMAN Growth/differentiation factor 15 OS=Homo s... 33 0.58 sp|A2AQH4|BCORL_MOUSE BCoR-like protein 1 OS=Mus musculus GN=Bco... 33 0.58 sp|Q2T9I5|RBM26_XENLA RNA-binding protein 26 OS=Xenopus laevis G... 32 0.75 sp|Q9NVV2|YS055_HUMAN Putative uncharacterized protein FLJ10490 ... 32 0.98 sp|O13762|YF2C_SCHPO Uncharacterized ATP-dependent helicase C17A... 32 0.98 sp|Q92766|RREB1_HUMAN RAS-responsive element-binding protein 1 O... 32 0.98 sp|Q5R4H1|T22D1_PONAB TSC22 domain family protein 1 OS=Pongo abe... 32 1.3 sp|Q6FNU4|SEC31_CANGA Protein transport protein SEC31 OS=Candida... 32 1.3 sp|Q3YZ12|HCAB_SHISS 3-phenylpropionate-dihydrodiol/cinnamic aci... 31 1.7 sp|Q83QJ8|HCAB_SHIFL 3-phenylpropionate-dihydrodiol/cinnamic aci... 31 1.7 sp|Q0T1X8|HCAB_SHIF8 3-phenylpropionate-dihydrodiol/cinnamic aci... 31 1.7 sp|Q31XU9|HCAB_SHIBS 3-phenylpropionate-dihydrodiol/cinnamic aci... 31 1.7 sp|A8A347|HCAB_ECOHS 3-phenylpropionate-dihydrodiol/cinnamic aci... 31 1.7 sp|Q8XA72|HCAB_ECO57 3-phenylpropionate-dihydrodiol/cinnamic aci... 31 1.7 sp|A7ZPY4|HCAB_ECO24 3-phenylpropionate-dihydrodiol/cinnamic aci... 31 1.7 sp|Q03211|PEXLP_TOBAC Pistil-specific extensin-like protein OS=N... 31 1.7 sp|Q6VUC0|AP2E_HUMAN Transcription factor AP-2 epsilon OS=Homo s... 31 1.7 sp|O35817|AKA14_RAT A-kinase anchor protein 14 OS=Rattus norvegi... 31 1.7 sp|Q15714|T22D1_HUMAN TSC22 domain family protein 1 OS=Homo sapi... 31 2.2 sp|Q6C443|OXR1_YARLI Oxidation resistance protein 1 OS=Yarrowia ... 31 2.2 sp|Q03414|MEF2A_XENLA Myocyte-specific enhancer factor 2A homolo... 31 2.2 sp|Q63187|ELOA1_RAT Transcription elongation factor B polypeptid... 31 2.2 sp|Q5XK84|CARM1_XENLA Histone-arginine methyltransferase CARM1 O... 31 2.2 sp|Q5H9F3|BCORL_HUMAN BCoR-like protein 1 OS=Homo sapiens GN=BCO... 31 2.2 sp|Q50630|PG44_MYCTU Uncharacterized PE-PGRS family protein PE_P... 30 2.8 sp|Q5AHB1|PAN1_CANAL Actin cytoskeleton-regulatory complex prote... 30 2.9
>sp|Q91V98|CD248_MOUSE Endosialin OS=Mus musculus GN=Cd248 PE=2 SV=1 Length = 765
Score = 39.7 bits (91), Expect = 0.005 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 12/120 (10%) Frame = +3
Query: 75 LTSPHLPE*GRMFPASFPLR-PPLQLHASPTGNAWDAANALPHRTSLLL----------- 218 L H P+ G + +FP P +LH PT +A P+ +S++ Sbjct: 398 LAPTHPPDFGLPYRPNFPQDGEPQRLHLEPTWPPPLSAPRGPYHSSVVSATRPMVISATR 457
Query: 219 PNVPSAHLAPIGPPQVLSSSDPPITKVLPPELAEKLVQALTARHQLLSSKSPACDGDHSH 398 P +PSAH V+S++ PP++ V PP +A A+ + HQ+ K+ D H Sbjct: 458 PTLPSAHKT-----SVISATRPPLSPVHPPAMAPATPPAVFSEHQIPKIKANYPDLPFGH 512
>sp|Q8BI84|MIA3_MOUSE Melanoma inhibitory activity protein 3 OS=Mus musculus GN=Mia3 PE=1 SV=2 Length = 1930
Score = 33.9 bits (76), Expect = 0.26 Identities = 27/90 (30%), Positives = 37/90 (41%) Frame = +3
Query: 75 LTSPHLPE*GRMFPASFPLRPPLQLHASPTGNAWDAANALPHRTSLLLPNVPSAHLAPIG 254 L +P PE G P R P Q + P N D + P P + + + Sbjct: 1021 LVTPPPPEEGWARPGEE--RQPPQQDSLPQENTGDLSVQPPEE-----PELSDQPVTSVQ 1073
Query: 255 PPQVLSSSDPPITKVLPPELAEKLVQALTA 344 PP+ SD P+T V PPE E Q +T+ Sbjct: 1074 PPEEPELSDQPVTSVQPPEEPELSDQPVTS 1103
>sp|Q0P5M0|PRR19_BOVIN Proline-rich protein 19 OS=Bos taurus GN=PRR19 PE=2 SV=1 Length = 363
Score = 33.5 bits (75), Expect = 0.34 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = +3
Query: 114 PASFPLRPPLQLHASPTGNAWDAANALPHRTSL-LLPNVPSAHLAPIGPPQVLSSSDPPI 290 P P PPL SP+G AW A S+ L+ P IGPPQ+L P+ Sbjct: 264 PPKGPWPPPLSSLPSPSGAAWGPPTAFDLLKSIWLVATPPPPRPWGIGPPQLLPQPPSPL 323
>sp|Q01705|NOTC1_MOUSE Neurogenic locus notch homolog protein 1 OS=Mus musculus GN=Notch1 PE=1 SV=2 Length = 2531
Score = 33.5 bits (75), Expect = 0.34 Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 9/116 (7%) Frame = +3
Query: 78 TSPHLPE*GRMFPASFPLRPP-LQLHASPTGNAWDAANALPHRTSLLLPNVPS-AHLAPI 251 T PHL + ++ P + PL+P LQ + P + AAN H L PS A + P+ Sbjct: 2364 TQPHLVQTQQVQPQNLPLQPQNLQPPSQPHLSVSSAANG--HLGRSFLSGEPSQADVQPL 2421
Query: 252 GPPQV-LSSSDPPITKVLPPELAEKLV------QALTARHQLLSSKSPACDGDHSH 398 GP + + + P ++ LP L +V Q LT Q S SP D SH Sbjct: 2422 GPSSLPVHTILPQESQALPTSLPSSMVPPMTTTQFLTPPSQHSYSSSPV-DNTPSH 2476
>sp|Q99988|GDF15_HUMAN Growth/differentiation factor 15 OS=Homo sapiens GN=GDF15 PE=1 SV=2 Length = 308
Score = 32.7 bits (73), Expect = 0.58 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 7/83 (8%) Frame = +3
Query: 90 LPE*GRMFPASFPLRPPLQLHASPTGNAWDAANALPHRTSLLLPNVPSAHLAPIGPP--- 260 LPE R+ A F L P +WD L + SL P P+ HL PP Sbjct: 114 LPEASRLHRALFRLSPT-------ASRSWDVTRPLRRQLSLARPQAPALHLRLSPPPSQS 166
Query: 261 -QVL---SSSDPPITKVLPPELA 317 Q+L SS+ P + L P+ A Sbjct: 167 DQLLAESSSARPQLELHLRPQAA 189
>sp|A2AQH4|BCORL_MOUSE BCoR-like protein 1 OS=Mus musculus GN=Bcorl1 PE=2 SV=1 Length = 1781
Score = 32.7 bits (73), Expect = 0.58 Identities = 35/113 (30%), Positives = 46/113 (40%), Gaps = 14/113 (12%) Frame = +3
Query: 45 VSALLAMVNSLTSPHLPE*GRMFPASFPLRPPLQLHASPTGNAWDAANALPHRTSLLLPN 224 VSA + + +++PH P S P PL + S A A P +L+L + Sbjct: 271 VSASVLVPVPVSAPHSVP----VPLSAPAPTPLTVSVSAPPLALIQAPVPPSAPTLVLAS 326
Query: 225 VPSAHLAPI---------GPPQV-----LSSSDPPITKVLPPELAEKLVQALT 341 VP+ LAP+ PP V SS PP T L P A V A T Sbjct: 327 VPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPT 379
>sp|Q2T9I5|RBM26_XENLA RNA-binding protein 26 OS=Xenopus laevis GN=rbm26 PE=2 SV=2 Length = 1059
Score = 32.3 bits (72), Expect = 0.75 Identities = 22/62 (35%), Positives = 26/62 (41%) Frame = +3
Query: 123 FPLRPPLQLHASPTGNAWDAANALPHRTSLLLPNVPSAHLAPIGPPQVLSSSDPPITKVL 302 FP PP+ P G LP SLL P + P+ PP L S PP+T Sbjct: 370 FPAPPPVLEGPPPPG--------LPPPPSLLTPPPVNLQPPPVPPPGPLPPSLPPVTGPP 421
Query: 303 PP 308 PP Sbjct: 422 PP 423
>sp|Q9NVV2|YS055_HUMAN Putative uncharacterized protein FLJ10490 OS=Homo sapiens PE=2 SV=2 Length = 129
Score = 32.0 bits (71), Expect = 0.98 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = +3
Query: 114 PASFPLRPPLQLH-----ASPTGNAWDAANALPHRTSLLLPNVPSAHLAPIG 254 P S PLRPP +LH A+PT A P RT L++ + P P G Sbjct: 32 PHSAPLRPPRELHAAPPPATPTQTVVRPA-GFPRRTRLMVRSAPPTQRPPTG 82
>sp|O13762|YF2C_SCHPO Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe GN=SPAC17A2.12 PE=2 SV=1 Length = 897
Score = 32.0 bits (71), Expect = 0.98 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 10/75 (13%) Frame = +3
Query: 120 SFPLRPPLQLHAS----------PTGNAWDAANALPHRTSLLLPNVPSAHLAPIGPPQVL 269 +FP RPP +L ++ P+ ++ + +++PH TS + ++PS VL Sbjct: 100 NFPFRPPTRLTSTPSNSSSLPSIPSSSSTPSISSIPHTTSSVSNDIPS----------VL 149
Query: 270 SSSDPPITKVLPPEL 314 SSD PI P L Sbjct: 150 GSSDHPIDLDNPEHL 164
>sp|Q92766|RREB1_HUMAN RAS-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1 PE=1 SV=3 Length = 1687
Score = 32.0 bits (71), Expect = 0.98 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 5/99 (5%) Frame = +3
Query: 114 PASFPLRPPLQLHASPTGNAWDAANALPHRTSLLLPNVPSAHLAPIGPPQVLSSSDPPIT 293 P + PL+ P+QL +A ++ L ++LL +A L P+ P L PP+T Sbjct: 1003 PPAQPLQGPVQLAVPIYSSALVSSPPLVGSSALLSG---TALLRPLRPKPPLLLPKPPVT 1059
Query: 294 KVLPPELA-EKLVQALTARHQLLSSK----SPACDGDHS 395 + LPP + +++ ++++ LL +K PA G ++ Sbjct: 1060 EELPPLASIAQIISSVSSAPTLLKTKVADPGPASTGSNT 1098
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B6LLN6 |
| Definition |
tr|B6LLN6|B6LLN6_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae |
| Align length |
50 |
| Score (bit) |
38.9 |
| E-value |
0.13 |
| Report |
 |