BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920486|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_F07.
         (543 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2LR98|SYY_SYNAS Tyrosyl-tRNA synthetase OS=Syntrophus acidit...    31   3.4  
sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=H...    30   5.8  
sp|Q3KQE5|T38BA_XENLA Trimeric intracellular cation channel type...    30   7.6  
sp|Q9AY27|YS1_MAIZE Iron-phytosiderophore transporter yellow str...    30   9.9  
sp|Q9HDB5|NRX3B_HUMAN Neurexin-3-beta OS=Homo sapiens GN=NRXN3 P...    30   9.9  

>sp|Q2LR98|SYY_SYNAS Tyrosyl-tRNA synthetase OS=Syntrophus
           aciditrophicus (strain SB) GN=tyrS PE=3 SV=1
          Length = 428

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
 Frame = -3

Query: 322 LSTHGSTSIAFIELTSAELGSPCAFSWPTTGQRMISTSRIQPPAVL----*AQYKSTFTK 155
           L  HG TSIA +   +A +G P   S  T  +++++  +I+  A       A+Y S   K
Sbjct: 60  LQRHGHTSIALVGGGTALIGDP---SGKTEMRQILTREKIELNATCMRRQFARYLSFEDK 116

Query: 154 ASTLMCDLKWFEPLPKIADLA*VKLHFPIQQTLQQQAHNI 35
            + ++ +  W   L  I+ L  +  HF + + L  +++ +
Sbjct: 117 KAMMINNADWLTKLNYISFLRDIGRHFSVNKMLAAESYKM 156


>sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo
            sapiens GN=RAPTOR PE=1 SV=1
          Length = 1335

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
 Frame = -2

Query: 230  PKNDLHISNSTSSCPLSPIQE--HFHQSKHFDV*SQMV*TTSKDSRFGMSKASFPN---- 69
            P+  L  S+ T S P SP  +  H HQ+      S    T+S      ++K         
Sbjct: 847  PQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASS---TSSSSLTNDVAKQPVSRDLPS 903

Query: 68   --PTNTAAAGTQYRPDTHQEPPLR 3
              P  T  AG QY P +HQ P  R
Sbjct: 904  GRPGTTGPAGAQYTPHSHQFPRTR 927


>sp|Q3KQE5|T38BA_XENLA Trimeric intracellular cation channel type
           B-A OS=Xenopus laevis GN=tmem38b-A PE=2 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +3

Query: 114 SGSNHLRSHIKVLALVKVLLYWAQRTAGG*IRDVEIILWPVVGQEKAQGLPSSADV 281
           SG  H  SH K   LV + + WA+   GG I + E ++  V   E  + L  S  V
Sbjct: 127 SGVTHAHSHYKDALLVMITIGWARGAGGGLISNFEQLVRGVWKPESNEFLKMSYPV 182


>sp|Q9AY27|YS1_MAIZE Iron-phytosiderophore transporter yellow stripe
           1 OS=Zea mays GN=YS1 PE=2 SV=1
          Length = 682

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 117 GSNHLRSH-IKVLALVKVLLYWAQRTAGG*IRDVEIILWPVVGQEKAQGLPSSADVSSMK 293
           G+  + SH + +  L+  +L W              ILWP++ ++K +  P++   SSMK
Sbjct: 280 GAGMICSHLVNISTLLGAILSWG-------------ILWPLISKQKGEWYPANIPESSMK 326

Query: 294 AM 299
           ++
Sbjct: 327 SL 328


>sp|Q9HDB5|NRX3B_HUMAN Neurexin-3-beta OS=Homo sapiens GN=NRXN3 PE=1
           SV=4
          Length = 637

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 233 WPKNDLHISNSTSSCPLSPIQE--HFHQSKHFDV 138
           W  +++  S+STSS P S  Q   HFH SKH  V
Sbjct: 34  WSSSNVASSSSTSSSPGSHSQHEHHFHGSKHHSV 67

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920486|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_F07.
         (543 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0WNB7|Q0WNB7_ARATH Putative uncharacterized protein At3g5048...    33   7.4  

>tr|Q0WNB7|Q0WNB7_ARATH Putative uncharacterized protein At3g50480
           OS=Arabidopsis thaliana GN=At3g50480 PE=2 SV=1
          Length = 200

 Score = 33.5 bits (75), Expect = 7.4
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +3

Query: 138 HIKVLALVKVLLYWAQRTAGG*IRDVEIILWPVVGQEKAQGLPSSADVSSMKAMDVDPWV 317
           +IK L  +++ L W  R       ++++  W  + + KA  +    D+  MKA+ VD W 
Sbjct: 105 YIKKLESIELELVWVAR-------EIQVHQWTDIKEMKAIQVHQWTDIKEMKAIQVDQWT 157

Query: 318 D 320
           D
Sbjct: 158 D 158