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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920496
Clone id YMU001_000137_G07
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AATTCGCGGCCGCGAATTCTTCCAGTTTGTGCAAAAAATTTAATAAGCTTTGATGAACCT
ATATGCACAATCCTTGCATAATAAAATGCAGGCGACTGTGAGTACATGATAACAACGGTT
CCCGATCAACAAGTCAAGTGTCACATGATTCCGTCCCCAATCAACAAGTCAGTGTCACAT
GATTGGGAATACCTGCTGTCGTCTTCACTCTGACTGGGTAAGATCACTTCGTCCACCTCT
GTTGAGGGTGGGAGGTAGTTCAAATTGCTAAACTTCCAGAGCAATTTTGAGATGCGATGC
GTGAAGTCTGGAATTTGCACATTGTCCTCAGATAGGAGAAGGGATGGCTGTATCCCTAGC
CTCTGCATCGAGGTACATAGTTGCCCTTCAAAATGTGGAGATAATGTCGCATGGCTGTTC
CCTGCATCTCTGTGAAGAGGAAGCCCAAAGTCTGATCTGGAAATCCATGGTTGCTGTGAC
TTCTCGTCATAAAAGGGTGGAAATGCAGAGGACTTATGGAGTATCTTATCTGCGTCCTCC
CGCAATGC
■■Homology search results ■■ -
sp_hit_id P26981
Definition sp|P26981|GPA1_SOLLC Guanine nucleotide-binding protein alpha-1 subunit OS=Solanum lycopersicum
Align length 58
Score (bit) 33.9
E-value 0.48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920496|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_G07.
         (521 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P26981|GPA1_SOLLC Guanine nucleotide-binding protein alpha-1 ...    34   0.48 
sp|Q7TMV3|FAKD5_MOUSE FAST kinase domain-containing protein 5 OS...    32   1.4  
sp|Q7ULB5|MACB_RHOBA Macrolide export ATP-binding/permease prote...    31   3.1  
sp|P93564|GPA1_SOLTU Guanine nucleotide-binding protein alpha-1 ...    31   3.1  
sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sa...    30   5.3  
sp|P40996|SCD2_SCHPO Protein scd2/ral3 OS=Schizosaccharomyces po...    30   5.3  
sp|Q0KK59|K1409_MOUSE Uncharacterized protein KIAA1409 OS=Mus mu...    30   5.3  
sp|Q9P2D8|K1409_HUMAN Uncharacterized protein KIAA1409 OS=Homo s...    30   5.3  
sp|Q5RFI6|FAKD5_PONAB FAST kinase domain-containing protein 5 OS...    30   5.3  
sp|Q95KD0|FAKD5_MACFA FAST kinase domain-containing protein 5 OS...    30   5.3  
sp|Q7L8L6|FAKD5_HUMAN FAST kinase domain-containing protein 5 OS...    30   5.3  
sp|Q6P4S2|SHIP1_XENLA Phosphatidylinositol-3,4,5-trisphosphate 5...    30   6.9  
sp|Q62191|RO52_MOUSE 52 kDa Ro protein OS=Mus musculus GN=Trim21...    30   6.9  
sp|Q0SSJ0|RBSA_CLOPS Ribose import ATP-binding protein rbsA OS=C...    30   6.9  
sp|Q8XJX3|RBSA_CLOPE Ribose import ATP-binding protein rbsA OS=C...    30   6.9  
sp|Q0TPX5|RBSA_CLOP1 Ribose import ATP-binding protein rbsA OS=C...    30   6.9  
sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate c...    30   6.9  
sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate c...    30   6.9  
sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate c...    30   6.9  
sp|Q6P5H2|NEST_MOUSE Nestin OS=Mus musculus GN=Nes PE=1 SV=1           30   9.0  
sp|Q8BJ34|LKAP_MOUSE Limkain-b1 OS=Mus musculus GN=Lkap PE=1 SV=2      30   9.0  

>sp|P26981|GPA1_SOLLC Guanine nucleotide-binding protein alpha-1
           subunit OS=Solanum lycopersicum GN=GPA1 PE=2 SV=1
          Length = 384

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 371 PHFEGQLCTSMQRLGIQPSL---LLSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEV 207
           PH    L   ++ L   P++   LL  + +Q+PD  H   + L +FS+++Y+P   +V
Sbjct: 130 PHLTKDLVQDIEALWKDPAIQETLLRGNELQVPDCAHYFMENLERFSDVHYIPTKEDV 187


>sp|Q7TMV3|FAKD5_MOUSE FAST kinase domain-containing protein 5
           OS=Mus musculus GN=Fastkd5 PE=2 SV=1
          Length = 762

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 266 ISKLLWKFSNLNYLPPSTE 210
           ++K+LW F  LNY PP+TE
Sbjct: 429 VAKILWSFGTLNYKPPNTE 447


>sp|Q7ULB5|MACB_RHOBA Macrolide export ATP-binding/permease protein
           macB OS=Rhodopirellula baltica GN=macB PE=3 SV=1
          Length = 684

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 245 FSNLNYLPPSTEVDEVILPSQSEDDSRYSQSCDTD 141
           F N N LP +T +D V+LP+    D R  + C  D
Sbjct: 89  FQNFNLLPRATALDNVMLPTIYASDGRSRRECIED 123


>sp|P93564|GPA1_SOLTU Guanine nucleotide-binding protein alpha-1
           subunit OS=Solanum tuberosum GN=GPA1 PE=2 SV=1
          Length = 384

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -1

Query: 371 PHFEGQLCTSMQRLGIQPSL---LLSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEV 207
           P     L   ++ L   P++   LL  + +Q+PD  H   + L +FS+++Y+P   +V
Sbjct: 130 PRLTKDLVQDIEALWKDPAIQETLLRGNELQVPDCAHYFMENLERFSDIHYIPTKEDV 187


>sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo
           sapiens GN=UBR5 PE=1 SV=2
          Length = 2799

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +2

Query: 317 MAVSLASASRYIVALQNVEIMS-HGCSLHLCEEEAQSLIWKSMVAVTSRHKRVEMQR 484
           +A  L   ++    LQ   I+S H C+L+ C +   SL W  +V  + R K +E  R
Sbjct: 454 VASKLEHTAQTYSELQGERIVSLHCCALYTCAQLENSLYWWGVVPFSQRKKMLEKAR 510


>sp|P40996|SCD2_SCHPO Protein scd2/ral3 OS=Schizosaccharomyces pombe
           GN=scd2 PE=1 SV=1
          Length = 536

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 20/81 (24%), Positives = 37/81 (45%)
 Frame = -1

Query: 374 SPHFEGQLCTSMQRLGIQPSLLLSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEVDEVI 195
           +P   G  C    RLG +   L    ++   DF  R++  L +  +L+Y   +      +
Sbjct: 452 APTTAGSTCKVKVRLGDETFALRVPSDISFEDFCERLTNKLGECEHLSYRDTNA---NKV 508

Query: 194 LPSQSEDDSRYSQSCDTDLLI 132
           LP  + DD R + S ++ +L+
Sbjct: 509 LPLNNVDDLRKACSQESGVLL 529


>sp|Q0KK59|K1409_MOUSE Uncharacterized protein KIAA1409 OS=Mus
           musculus GN=Kiaa1409 PE=1 SV=1
          Length = 2596

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 17/66 (25%), Positives = 34/66 (51%)
 Frame = +2

Query: 323 VSLASASRYIVALQNVEIMSHGCSLHLCEEEAQSLIWKSMVAVTSRHKRVEMQRTYGVSY 502
           V+L+++S  ++A+Q      + C L  C  + +  +WK ++ V +          YG S 
Sbjct: 219 VNLSASSMLMIAMQYTSNPVYHCQLLECLMKYKQEVWKDLLYVIA----------YGPSQ 268

Query: 503 LRPPAM 520
           ++PPA+
Sbjct: 269 VKPPAV 274


>sp|Q9P2D8|K1409_HUMAN Uncharacterized protein KIAA1409 OS=Homo
           sapiens GN=KIAA1409 PE=2 SV=3
          Length = 2635

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 17/66 (25%), Positives = 34/66 (51%)
 Frame = +2

Query: 323 VSLASASRYIVALQNVEIMSHGCSLHLCEEEAQSLIWKSMVAVTSRHKRVEMQRTYGVSY 502
           V+L+++S  ++A+Q      + C L  C  + +  +WK ++ V +          YG S 
Sbjct: 219 VNLSASSMLMIAMQYTSNPVYHCQLLECLMKYKQEVWKDLLYVIA----------YGPSQ 268

Query: 503 LRPPAM 520
           ++PPA+
Sbjct: 269 VKPPAV 274


>sp|Q5RFI6|FAKD5_PONAB FAST kinase domain-containing protein 5
           OS=Pongo abelii GN=FASTKD5 PE=2 SV=1
          Length = 764

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 266 ISKLLWKFSNLNYLPPSTE 210
           ++K+LW F  LNY PP+ E
Sbjct: 430 VAKILWSFGTLNYKPPNAE 448


>sp|Q95KD0|FAKD5_MACFA FAST kinase domain-containing protein 5
           OS=Macaca fascicularis GN=FASTKD5 PE=2 SV=1
          Length = 764

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 266 ISKLLWKFSNLNYLPPSTE 210
           ++K+LW F  LNY PP+ E
Sbjct: 430 VAKILWSFGTLNYKPPNAE 448
tr_hit_id Q9FV62
Definition tr|Q9FV62|Q9FV62_TOBAC Heterotrimeric GTP-binding protein subunit alpha 2 OS=Nicotiana tabacum
Align length 58
Score (bit) 35.4
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920496|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_G07.
         (521 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FV62|Q9FV62_TOBAC Heterotrimeric GTP-binding protein subuni...    35   1.7  
tr|Q8W3P4|Q8W3P4_TOBAC Heterotrimeric GTP binding protein alpha ...    35   1.7  
tr|Q8W3P3|Q8W3P3_TOBAC Heterotrimeric GTP binding protein alpha ...    35   1.7  
tr|Q8W3P2|Q8W3P2_NICSY Heterotrimeric GTP binding protein alpha ...    35   1.7  
tr|Q8W3P1|Q8W3P1_NICTO Heterotrimeric GTP binding protein alpha ...    35   1.7  
tr|Q40404|Q40404_NICPL Heterotrimeric G protein subunit OS=Nicot...    35   2.2  
tr|Q17LD1|Q17LD1_AEDAE Kek1 OS=Aedes aegypti GN=AAEL001368 PE=4 ...    34   5.0  
tr|B0X983|B0X983_CULQU Kek1 OS=Culex quinquefasciatus GN=CpipJ_C...    34   5.0  
tr|Q5P4I5|Q5P4I5_AZOSE Putative iron-sulfur binding protein OS=A...    33   8.5  
tr|Q1JTE4|Q1JTE4_TOXGO Putative uncharacterized protein OS=Toxop...    33   8.5  
tr|B6KQY2|B6KQY2_TOXGO Putative uncharacterized protein OS=Toxop...    33   8.5  
tr|A2ER94|A2ER94_TRIVA GP63-like OS=Trichomonas vaginalis G3 GN=...    33   8.5  

>tr|Q9FV62|Q9FV62_TOBAC Heterotrimeric GTP-binding protein subunit
           alpha 2 OS=Nicotiana tabacum PE=2 SV=1
          Length = 384

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 371 PHFEGQLCTSMQRLGIQPSL---LLSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEV 207
           PH    L   ++ L   P++   +L  + +Q+PD  H   + L +FS++NY+P   +V
Sbjct: 130 PHLTKDLVQDIEALWKDPAIQETILRGNELQVPDCAHYFMENLQRFSDINYVPSKEDV 187


>tr|Q8W3P4|Q8W3P4_TOBAC Heterotrimeric GTP binding protein alpha
           subunit OS=Nicotiana tabacum GN=NtGA2 PE=4 SV=1
          Length = 384

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 371 PHFEGQLCTSMQRLGIQPSL---LLSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEV 207
           PH    L   ++ L   P++   +L  + +Q+PD  H   + L +FS++NY+P   +V
Sbjct: 130 PHLTKDLVQDIEALRKDPAIQETILRGNELQVPDCAHYFMENLQRFSDINYVPSKEDV 187


>tr|Q8W3P3|Q8W3P3_TOBAC Heterotrimeric GTP binding protein alpha
           subunit (Fragment) OS=Nicotiana tabacum GN=NtGA1 PE=4
           SV=1
          Length = 366

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 371 PHFEGQLCTSMQRLGIQPSL---LLSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEV 207
           PH    L   ++ L   P++   +L  + +Q+PD  H   + L +FS++NY+P   +V
Sbjct: 119 PHLTKDLVQDIEALWKDPAIQETILRGNELQVPDCAHYFMENLQRFSDINYVPSKEDV 176


>tr|Q8W3P2|Q8W3P2_NICSY Heterotrimeric GTP binding protein alpha
           subunit (Fragment) OS=Nicotiana sylvestris GN=NtGA1s
           PE=4 SV=1
          Length = 366

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 371 PHFEGQLCTSMQRLGIQPSL---LLSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEV 207
           PH    L   ++ L   P++   +L  + +Q+PD  H   + L +FS++NY+P   +V
Sbjct: 119 PHLTKDLVQDIEALWKDPAIQETILRGNELQVPDCAHYFMENLQRFSDINYVPSKEDV 176


>tr|Q8W3P1|Q8W3P1_NICTO Heterotrimeric GTP binding protein alpha
           subunit (Fragment) OS=Nicotiana tomentosiformis
           GN=NtGA2t PE=4 SV=1
          Length = 366

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 371 PHFEGQLCTSMQRLGIQPSL---LLSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEV 207
           PH    L   ++ L   P++   +L  + +Q+PD  H   + L +FS++NY+P   +V
Sbjct: 119 PHLTKDLVQDIEALWKDPAIQETILRGNELQVPDCAHYFMENLQRFSDINYVPSKEDV 176


>tr|Q40404|Q40404_NICPL Heterotrimeric G protein subunit
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 372

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 371 PHFEGQLCTSMQRLGIQPSL---LLSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEV 207
           PH    L   ++ L   P++   +L  + +Q+PD  H   + L +FS++NY+P   +V
Sbjct: 138 PHLTKDLVQDIEALWRDPAIQETILRGNELQVPDCAHYFMENLQRFSDVNYVPSKEDV 195


>tr|Q17LD1|Q17LD1_AEDAE Kek1 OS=Aedes aegypti GN=AAEL001368 PE=4
           SV=1
          Length = 815

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 26/97 (26%), Positives = 41/97 (42%)
 Frame = -1

Query: 428 SDFGLPLHRDAGNSHATLSPHFEGQLCTSMQRLGIQPSLLLSEDNVQIPDFTHRISKLLW 249
           SD+GLP+   A   H  LS               IQP+   S  ++ +   T R+    W
Sbjct: 737 SDYGLPIVPGAEQLHNKLS--------------SIQPAHHGSTGSMPMNAKTLRV----W 778

Query: 248 KFSNLNYLPPSTEVDEVILPSQSEDDSRYSQSCDTDL 138
           +   +  LPP T +   +  S++  D  Y + C TD+
Sbjct: 779 QKGGVPVLPPVTALKRALSNSRNSPDEGYQEGCGTDV 815


>tr|B0X983|B0X983_CULQU Kek1 OS=Culex quinquefasciatus
           GN=CpipJ_CPIJ015995 PE=4 SV=1
          Length = 777

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 26/97 (26%), Positives = 41/97 (42%)
 Frame = -1

Query: 428 SDFGLPLHRDAGNSHATLSPHFEGQLCTSMQRLGIQPSLLLSEDNVQIPDFTHRISKLLW 249
           SD+GLP+   A   H  LS               IQP+   S  ++ +   T R+    W
Sbjct: 699 SDYGLPIVPGAEQLHNKLS--------------SIQPAHHGSTGSMPMNAKTLRV----W 740

Query: 248 KFSNLNYLPPSTEVDEVILPSQSEDDSRYSQSCDTDL 138
           +   +  LPP T +   +  S++  D  Y + C TD+
Sbjct: 741 QKGGVPVLPPVTALKRALSNSRNSPDEGYQEGCGTDV 777


>tr|Q5P4I5|Q5P4I5_AZOSE Putative iron-sulfur binding protein
           OS=Azoarcus sp. (strain EbN1) GN=AZOSEA16530 PE=4 SV=1
          Length = 689

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
 Frame = +1

Query: 265 MRCVK---SGICTLSSDRRRDGCIPSLCIEVHSCPSKCGDNVAWLFP-----ASL*RGSP 420
           M CV    SG  + +SD  R G I   C++   C S C +N   L P      S  R  P
Sbjct: 561 MSCVSACPSGALSAASDAMRLGFIEKSCVQCGLCASSCPENAVTLMPRLLLDESARRTVP 620

Query: 421 KSDLEIHGC 447
             + EI  C
Sbjct: 621 LREAEIFHC 629


>tr|Q1JTE4|Q1JTE4_TOXGO Putative uncharacterized protein OS=Toxoplasma
            gondii RH GN=TgIa.0760c PE=4 SV=1
          Length = 2465

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = -1

Query: 308  LSEDNVQIPDFTHRISKLLWKFSNLNYLPPSTEVDEVILPSQSEDDSRYSQSCDTDLLIG 129
            L  D  Q+P     ++      +NL+ + P T+       S S   SR +QSC     + 
Sbjct: 1797 LRGDPPQMPKVVGSLAVKAAPPANLSVIAPKTQTHREAAASLSSSPSRAAQSCLLSGSVA 1856

Query: 128  DGIM-*HLTC*SGTVVIMYSQSPAFYYA 48
             G+   H +C     V +++  P  YYA
Sbjct: 1857 SGVFPNHRSCSVAPGVSLHASEPRLYYA 1884