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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920497
Clone id YMU001_000137_G08
Library
Length 607
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCAAGTATTATGCAGACGATCTTCAGGCAGCAAGGACCAACTATGCGAGGTCTTTAGAC
GTGCGAAGGAGTGCGTTGCAGGATGATACAGAGCTGTCATCCCAGGTGCTGGATCTCGCT
GTGTCACTTGCTAAAGTAGCAGATGTAGATAGAGCTCTTGGTAATGATGGGCCTGCGAGC
GAGGGCTTTCAAGAAGCAATAAAGATGCTCGAGAATCTTTCCGGGAAGTCTAAAGAGGAT
ACATCCCTTGAGCGACGACGCTTGTCAATTTTAGAGTTTTTGCATGGGCAAACAAAAAAG
GATGCTTGAGGTTGCTTGCCGCCTGGGGAGTTTCATCGATGAATTGTAAAAAAGGTAGCG
AGGCTGTCACACTTTTGCTGTGAGTGTATATAAAAGGGTTATTGTGGACTCTGTCATTGT
ATGACATTCAGTGATTGGAGGAGAGGCATGAGCCCTTGATGATCTTTCGTAATATCTTTA
CATCAGAGAATCCTATGAAGTGATAGTTGAATCTATGCTGTGGCTTGCCAATCCAATTGT
GCCCAGGAAAGGCATGTACGTCTTTTTTTGCACTATCAGTACAAATGTAAAGAACACTTC
TTGTGAT
■■Homology search results ■■ -
sp_hit_id Q9WV70
Definition sp|Q9WV70|NOC2L_MOUSE Nucleolar complex protein 2 homolog OS=Mus musculus
Align length 101
Score (bit) 30.8
E-value 5.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920497|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_G08.
         (607 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WV70|NOC2L_MOUSE Nucleolar complex protein 2 homolog OS=Mus...    31   5.6  

>sp|Q9WV70|NOC2L_MOUSE Nucleolar complex protein 2 homolog OS=Mus
           musculus GN=Noc2l PE=2 SV=2
          Length = 747

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
 Frame = +1

Query: 106 VLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLE-NLSGKSKEDTSLERRRLSILEFL 282
           VL   + + +  D +R  G        F   +K+   NL  K+  D  LE+    ILE+L
Sbjct: 476 VLPFILEIFQQVDFNRRPGRMSSKPINFSVILKLSSTNLQEKAYRDGLLEQLCDLILEYL 535

Query: 283 HGQTKKDA*GCLPPGEFHR*IVKKVARLSHFCCECI*KGYC 405
           H Q    A        F   ++  V +L  F  EC    YC
Sbjct: 536 HSQAHSIA--------FPELVLPTVLQLKSFLRECKVANYC 568
tr_hit_id B4FS59
Definition tr|B4FS59|B4FS59_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 97
Score (bit) 116.0
E-value 1.0e-24
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920497|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_G08.
         (607 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4FS59|B4FS59_MAIZE Putative uncharacterized protein OS=Zea m...   116   1e-24
tr|Q658D5|Q658D5_ORYSJ cDNA clone:001-006-B04, full insert seque...   112   2e-23
tr|Q0JRF2|Q0JRF2_ORYSJ Os01g0104100 protein (Fragment) OS=Oryza ...   112   2e-23
tr|B8ACS7|B8ACS7_ORYSI Putative uncharacterized protein OS=Oryza...   112   2e-23
tr|A2ZNA5|A2ZNA5_ORYSJ Putative uncharacterized protein OS=Oryza...   112   2e-23
tr|Q6K8Z1|Q6K8Z1_ORYSJ Os02g0795300 protein OS=Oryza sativa subs...   111   4e-23
tr|B8AE50|B8AE50_ORYSI Putative uncharacterized protein OS=Oryza...   111   4e-23
tr|A3AC90|A3AC90_ORYSJ Putative uncharacterized protein OS=Oryza...   111   4e-23
tr|A7QAJ4|A7QAJ4_VITVI Chromosome undetermined scaffold_71, whol...   110   5e-23
tr|Q9M2V1|Q9M2V1_ARATH RING finger-like protein OS=Arabidopsis t...   108   2e-22
tr|A9PIZ1|A9PIZ1_POPJC Putative uncharacterized protein OS=Popul...   107   7e-22
tr|A9RJS0|A9RJS0_PHYPA Predicted protein OS=Physcomitrella paten...   106   9e-22
tr|B6SKG7|B6SKG7_MAIZE Putative uncharacterized protein OS=Zea m...    85   4e-15
tr|B4SHG6|B4SHG6_PELPB SEFIR domain protein OS=Pelodictyon phaeo...    42   0.036
tr|B1BAG9|B1BAG9_CLOBO Helix-turn-helix domain protein OS=Clostr...    41   0.062
tr|A1BGR1|A1BGR1_CHLPD Tetratricopeptide TPR_2 repeat protein OS...    39   0.31 
tr|B8G2Z9|B8G2Z9_9CHLR Tetratricopeptide TPR_2 repeat protein OS...    38   0.52 
tr|Q12QP4|Q12QP4_SHEDO Transcriptional regulatory protein-like p...    37   0.89 
tr|B6M5N9|B6M5N9_BRAFL Putative uncharacterized protein OS=Branc...    37   1.2  
tr|B6LJG2|B6LJG2_BRAFL Putative uncharacterized protein OS=Branc...    36   2.0  
tr|B3G446|B3G446_9BILA TPR repeat containing protein-like protei...    35   2.6  
tr|Q4PA50|Q4PA50_USTMA Putative uncharacterized protein OS=Ustil...    35   2.6  
tr|B6NHT9|B6NHT9_BRAFL Putative uncharacterized protein OS=Branc...    35   3.4  
tr|B5JSL4|B5JSL4_9GAMM RNA polymerase sigma-54 factor OS=gamma p...    35   4.4  
tr|B6LJG3|B6LJG3_BRAFL Putative uncharacterized protein OS=Branc...    35   4.4  
tr|A5MQV8|A5MQV8_STRPN Immunoglobulin A1 protease OS=Streptococc...    34   5.8  
tr|A5LEZ4|A5LEZ4_STRPN Phosphopyruvate hydratase OS=Streptococcu...    34   5.8  
tr|B6PJ06|B6PJ06_BRAFL Putative uncharacterized protein OS=Branc...    34   5.8  
tr|B2VTN7|B2VTN7_PYRTR Phenylacetate 2-hydroxylase OS=Pyrenophor...    34   5.8  
tr|B6MIH5|B6MIH5_BRAFL Putative uncharacterized protein OS=Branc...    34   7.5  

>tr|B4FS59|B4FS59_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 379

 Score =  116 bits (290), Expect = 1e-24
 Identities = 61/97 (62%), Positives = 78/97 (80%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           L+YY  DLQ+AR  YARSLDVRR+A+++ + ++SQV+DLA SLAKVADVDR LGN+  A 
Sbjct: 280 LRYYDGDLQSARNYYARSLDVRRNAVKEHSAVASQVIDLATSLAKVADVDRNLGNESTAV 339

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQ 291
           EGF+EAI+ LE L   S E T+LE+RRLS+L+FLH Q
Sbjct: 340 EGFEEAIRCLEKLKLDS-EQTTLEQRRLSVLDFLHNQ 375


>tr|Q658D5|Q658D5_ORYSJ cDNA clone:001-006-B04, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0436E04.13 PE=2 SV=1
          Length = 363

 Score =  112 bits (280), Expect = 2e-23
 Identities = 61/97 (62%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           L+YY  DL +AR+ YARSLDVRRSA ++ + ++SQV+D+A SLAKVADVDR LGN+  A 
Sbjct: 264 LRYYDGDLHSARSYYARSLDVRRSAAKEHSAVASQVIDVATSLAKVADVDRNLGNESMAV 323

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQ 291
           EGF+EAIK LENL  +S E  SLE+RRLS+L+FL  Q
Sbjct: 324 EGFEEAIKCLENLKLESGE-ASLEQRRLSVLDFLQKQ 359


>tr|Q0JRF2|Q0JRF2_ORYSJ Os01g0104100 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0104100 PE=4 SV=1
          Length = 418

 Score =  112 bits (280), Expect = 2e-23
 Identities = 61/97 (62%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           L+YY  DL +AR+ YARSLDVRRSA ++ + ++SQV+D+A SLAKVADVDR LGN+  A 
Sbjct: 319 LRYYDGDLHSARSYYARSLDVRRSAAKEHSAVASQVIDVATSLAKVADVDRNLGNESMAV 378

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQ 291
           EGF+EAIK LENL  +S E  SLE+RRLS+L+FL  Q
Sbjct: 379 EGFEEAIKCLENLKLESGE-ASLEQRRLSVLDFLQKQ 414


>tr|B8ACS7|B8ACS7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00037 PE=4 SV=1
          Length = 409

 Score =  112 bits (280), Expect = 2e-23
 Identities = 61/97 (62%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           L+YY  DL +AR+ YARSLDVRRSA ++ + ++SQV+D+A SLAKVADVDR LGN+  A 
Sbjct: 310 LRYYDGDLHSARSYYARSLDVRRSAAKEHSAVASQVIDVATSLAKVADVDRNLGNESMAV 369

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQ 291
           EGF+EAIK LENL  +S E  SLE+RRLS+L+FL  Q
Sbjct: 370 EGFEEAIKCLENLKLESGE-ASLEQRRLSVLDFLQKQ 405


>tr|A2ZNA5|A2ZNA5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000027 PE=4 SV=1
          Length = 344

 Score =  112 bits (280), Expect = 2e-23
 Identities = 61/97 (62%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           L+YY  DL +AR+ YARSLDVRRSA ++ + ++SQV+D+A SLAKVADVDR LGN+  A 
Sbjct: 245 LRYYDGDLHSARSYYARSLDVRRSAAKEHSAVASQVIDVATSLAKVADVDRNLGNESMAV 304

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQ 291
           EGF+EAIK LENL  +S E  SLE+RRLS+L+FL  Q
Sbjct: 305 EGFEEAIKCLENLKLESGE-ASLEQRRLSVLDFLQKQ 340


>tr|Q6K8Z1|Q6K8Z1_ORYSJ Os02g0795300 protein OS=Oryza sativa subsp.
           japonica GN=OJ1695_H09.11 PE=2 SV=1
          Length = 365

 Score =  111 bits (277), Expect = 4e-23
 Identities = 61/97 (62%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           L YY  DL +AR+ YARSLDVRRSA+++ + ++SQV+D+A SLAKVADVDR LGN+  A 
Sbjct: 266 LCYYDGDLHSARSYYARSLDVRRSAVKEHSAVASQVIDVATSLAKVADVDRNLGNESMAV 325

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQ 291
           EGF+EAIK LENL  +S E  SLE+RRLS+L+FL  Q
Sbjct: 326 EGFEEAIKCLENLKLESGE-ASLEQRRLSVLDFLQKQ 361


>tr|B8AE50|B8AE50_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09273 PE=4 SV=1
          Length = 655

 Score =  111 bits (277), Expect = 4e-23
 Identities = 61/97 (62%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           L YY  DL +AR+ YARSLDVRRSA+++ + ++SQV+D+A SLAKVADVDR LGN+  A 
Sbjct: 556 LCYYDGDLHSARSYYARSLDVRRSAVKEHSAVASQVIDVATSLAKVADVDRNLGNESMAV 615

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQ 291
           EGF+EAIK LENL  +S E  SLE+RRLS+L+FL  Q
Sbjct: 616 EGFEEAIKCLENLKLESGE-ASLEQRRLSVLDFLQKQ 651


>tr|A3AC90|A3AC90_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008412 PE=4 SV=1
          Length = 623

 Score =  111 bits (277), Expect = 4e-23
 Identities = 61/97 (62%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           L YY  DL +AR+ YARSLDVRRSA+++ + ++SQV+D+A SLAKVADVDR LGN+  A 
Sbjct: 524 LCYYDGDLHSARSYYARSLDVRRSAVKEHSAVASQVIDVATSLAKVADVDRNLGNESMAV 583

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQ 291
           EGF+EAIK LENL  +S E  SLE+RRLS+L+FL  Q
Sbjct: 584 EGFEEAIKCLENLKLESGE-ASLEQRRLSVLDFLQKQ 619


>tr|A7QAJ4|A7QAJ4_VITVI Chromosome undetermined scaffold_71, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00033956001 PE=4 SV=1
          Length = 369

 Score =  110 bits (276), Expect = 5e-23
 Identities = 57/97 (58%), Positives = 80/97 (82%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           LKYY  DL+AAR+ Y++SLDVRR+A++D + + SQ+LD+AVSLAKVADV+R +GN+  A 
Sbjct: 268 LKYYDGDLEAARSYYSQSLDVRRNAIKDRSNVPSQILDVAVSLAKVADVNRNVGNEDVAI 327

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQ 291
            GF+EAIK+LE+L+  S E+  LE+RRLS++EFL+ Q
Sbjct: 328 NGFEEAIKLLESLT-LSSEEAGLEQRRLSVMEFLNKQ 363


>tr|Q9M2V1|Q9M2V1_ARATH RING finger-like protein OS=Arabidopsis
           thaliana GN=T12E18_50 PE=2 SV=1
          Length = 405

 Score =  108 bits (270), Expect = 2e-22
 Identities = 57/102 (55%), Positives = 79/102 (77%)
 Frame = +1

Query: 1   LKYYADDLQAARTNYARSLDVRRSALQDDTELSSQVLDLAVSLAKVADVDRALGNDGPAS 180
           LKYY +DLQAAR+ Y R+L+VRR A++      SQ+LD+AVSLAKVAD+DR L N+  A+
Sbjct: 301 LKYYDEDLQAARSYYDRALNVRRDAMKHHPNAPSQILDVAVSLAKVADIDRTLQNEVAAT 360

Query: 181 EGFQEAIKMLENLSGKSKEDTSLERRRLSILEFLHGQTKKDA 306
           +GF+E +++LE+L   S ED++LE+RRLS+LEFL  Q + DA
Sbjct: 361 DGFKEGMRLLESLKLDS-EDSALEQRRLSVLEFLKKQVETDA 401