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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920502
Clone id YMU001_000137_H01
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000137_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGCTGATACAGTGGGAATAGACTCCCCTTTAAGCTTTACATCCAGAATGTGAGTCTTTCC
CCTGCTCTGTACAGTGATCTTTTTGTTGTAGGCATCCAGGATTCCCTGTACACGGAACAA
CCAAGGAATACCTAACAACACATCACATCCGTCCAGTGGCATGATGTAAAATTCTTCAGC
ATCTACATAGGACTGGATATGTAGACGCAACTTTCCAATGATGGGTGTCACAGCTTCTGT
ATGGCCAGGACATGCCAAACCTGCCTCTGCTGTATACCCCATCTCTTCAAGTCTGATTCC
CAACTTTGAAGCCAATTCTGGGGAAATGAAGTTGGCTTTGGCACCTAGATCAAAGAAGAT
AAGCATTGTTTGATCCTTGACCTTTCCCCATGCTCTGCAAAGCTCACTTGCATTTGAATT
TGGCTTGTCGCCCACCATATCTGGCACTAGACCATCCATGGGCTTCTTTCCTTTCTTGTC
TTCCTTGCCATCAGAATCAACTGGCC
■■Homology search results ■■ -
sp_hit_id A0JPP7
Definition sp|A0JPP7|DDI1_RAT Protein DDI1 homolog 1 OS=Rattus norvegicus
Align length 116
Score (bit) 30.4
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920502|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_H01.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A0JPP7|DDI1_RAT Protein DDI1 homolog 1 OS=Rattus norvegicus G...    30   4.9  
sp|Q6L786|MRGRD_MACFA Mas-related G-protein coupled receptor mem...    30   6.5  
sp|Q8WXI3|ASB10_HUMAN Ankyrin repeat and SOCS box protein 10 OS=...    30   6.5  
sp|Q4ZUN7|RRAA_PSEU2 Regulator of ribonuclease activity A OS=Pse...    30   8.4  

>sp|A0JPP7|DDI1_RAT Protein DDI1 homolog 1 OS=Rattus norvegicus
           GN=Ddi1 PE=2 SV=1
          Length = 408

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
 Frame = -3

Query: 384 KVKDQTMLIFFDLGAKANFISPELASKLGI-RLEEMGYTAEAGLACPGHTEAVTPIIGKL 208
           KV    +  F D GA+   +S   A +  I RL +  +   AG+A    T+ +   +   
Sbjct: 255 KVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRW---AGVAKGVGTQRIMGRVHLA 311

Query: 207 RLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITVQSRG-KTHIL 43
           ++ I+       F I+     D+LLG+  L R Q  +D     + + + G +TH L
Sbjct: 312 QIQIEGDFLQCSFSILEEQPMDILLGLDMLRRHQCSIDLKKNVLVIGTTGSQTHFL 367


>sp|Q6L786|MRGRD_MACFA Mas-related G-protein coupled receptor member
           D OS=Macaca fascicularis GN=MRGPRD PE=2 SV=1
          Length = 320

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +1

Query: 19  RLPFKLYIQNVSLSPALYSDLFVVGIQDSLYTEQPRNT*QHITSVQWHDVKFFSIYIGLD 198
           R PF +YI N++ +  L+  +F +    SL T+   +T   +  +    +K+F+  +GL 
Sbjct: 58  RTPFSIYILNLAAADLLF--VFCMAAMLSLETQPLVSTTDKVHELMKR-LKYFAYTVGLS 114

Query: 199 M*TQLSNDGCHS 234
           + T +S   C S
Sbjct: 115 LLTAISTQRCLS 126


>sp|Q8WXI3|ASB10_HUMAN Ankyrin repeat and SOCS box protein 10
           OS=Homo sapiens GN=ASB10 PE=2 SV=2
          Length = 467

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
 Frame = -3

Query: 435 VGDKPNSNASELCRAWGKVKDQTMLIFFDLGAKANFISPE-------LASKLGIRLEEMG 277
           + D+       LCR  G ++   +L+ F  GA+ +  S E       +A++LG  +E   
Sbjct: 176 IADQDGKRPLHLCRGPGTLECAELLLRF--GARVDGRSEEEEETPLHVAARLG-HVELAD 232

Query: 276 YTAEAGLACPG--HTEAVTPIIGKLRLHIQSYVDAEEFYIMPLDGCDVLL 133
                G ACP   + E  TP++    +  QS  DAE      L  C +LL
Sbjct: 233 LLLRRG-ACPDARNAEGWTPLLAACDVRCQSITDAEATTARCLQLCSLLL 281


>sp|Q4ZUN7|RRAA_PSEU2 Regulator of ribonuclease activity A
           OS=Pseudomonas syringae pv. syringae (strain B728a)
           GN=rraA PE=3 SV=1
          Length = 162

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -3

Query: 450 LVPDMVGDKPNSNASELCRAWGKVKDQTMLIFFDLGAKANFISPELASKLGI 295
           L+ DM+ DK   N  E    +G ++D  ++   DLG +A    P+   K GI
Sbjct: 73  LLGDMLADKAAKNGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKTEKRGI 124
tr_hit_id B5U9W4
Definition tr|B5U9W4|B5U9W4_LOTJA Putative uncharacterized protein OS=Lotus japonicus
Align length 118
Score (bit) 53.5
E-value 6.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920502|Adiantum capillus-veneris mRNA, clone:
YMU001_000137_H01.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5U9W4|B5U9W4_LOTJA Putative uncharacterized protein OS=Lotus...    54   6e-06
tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein OS=Lotus...    54   6e-06
tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein OS=Lotus...    54   6e-06
tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein OS=Lotus...    54   6e-06
tr|Q01LV8|Q01LV8_ORYSA OSIGBa0139I12.6 protein OS=Oryza sativa G...    53   1e-05
tr|B5U9V7|B5U9V7_LOTJA Putative uncharacterized protein OS=Lotus...    53   1e-05
tr|Q01M65|Q01M65_ORYSA OSIGBa0097I11.2 protein OS=Oryza sativa G...    52   2e-05
tr|Q01M64|Q01M64_ORYSA OSIGBa0097I11.3 protein OS=Oryza sativa G...    52   2e-05
tr|Q01LT3|Q01LT3_ORYSA OSIGBa0116O04.4 protein OS=Oryza sativa G...    52   2e-05
tr|Q01LT2|Q01LT2_ORYSA OSIGBa0116O04.5 protein OS=Oryza sativa G...    52   2e-05
tr|Q01MK0|Q01MK0_ORYSA OSIGBa0093M15.5 protein OS=Oryza sativa G...    52   2e-05
tr|Q01LS6|Q01LS6_ORYSA OSIGBa0161P06.6 protein OS=Oryza sativa G...    51   3e-05
tr|Q8LNB2|Q8LNB2_ORYSJ Putative retroelement OS=Oryza sativa sub...    51   4e-05
tr|Q7XL40|Q7XL40_ORYSJ OSJNBa0056L23.17 protein OS=Oryza sativa ...    51   4e-05
tr|Q33AI5|Q33AI5_ORYSJ Retrotransposon protein, putative, Ty3-gy...    51   4e-05
tr|Q01MW1|Q01MW1_ORYSA H0207B04.5 protein OS=Oryza sativa GN=H02...    51   4e-05
tr|Q01M95|Q01M95_ORYSA OSIGBa0146N20.5 protein OS=Oryza sativa G...    51   4e-05
tr|Q53N07|Q53N07_ORYSJ Retrotransposon protein, putative, Ty3-gy...    50   5e-05
tr|Q2QRR0|Q2QRR0_ORYSJ Retrotransposon protein, putative, Ty3-gy...    50   5e-05
tr|Q10LD3|Q10LD3_ORYSJ Retrotransposon protein, putative, Ty3-gy...    50   5e-05
tr|Q01MK2|Q01MK2_ORYSA OSIGBa0093M15.3 protein OS=Oryza sativa G...    50   5e-05
tr|Q01M76|Q01M76_ORYSA H0616A11.3 protein OS=Oryza sativa GN=H06...    50   5e-05
tr|Q01LT1|Q01LT1_ORYSA OSIGBa0161P06.1 protein OS=Oryza sativa G...    50   5e-05
tr|Q01HC7|Q01HC7_ORYSA H0807C06-H0308C08.6 protein OS=Oryza sati...    50   5e-05
tr|Q53L75|Q53L75_ORYSJ Retrotransposon protein, putative, Ty3-gy...    50   6e-05
tr|Q7XS91|Q7XS91_ORYSJ OSJNBa0074B10.9 protein OS=Oryza sativa s...    50   8e-05
tr|Q2R8H9|Q2R8H9_ORYSJ Retrotransposon protein, putative, Ty3-gy...    50   8e-05
tr|Q94HV6|Q94HV6_ORYSA Putative retroelement OS=Oryza sativa GN=...    49   1e-04
tr|Q8S5K3|Q8S5K3_ORYSJ Putative retroelement OS=Oryza sativa sub...    49   1e-04
tr|Q8LM86|Q8LM86_ORYSJ Putative retroelement (Fragment) OS=Oryza...    49   1e-04

>tr|B5U9W4|B5U9W4_LOTJA Putative uncharacterized protein OS=Lotus
           japonicus PE=4 SV=1
          Length = 1558

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = -3

Query: 387 GKVKDQTMLIFFDLGAKANFISPELASKLGIR-LEEMGYTAEAGLACPGHTEAVTPIIGK 211
           GK+ ++ +LI  D GA +NFIS +L  +L I  +    Y  E G    G  E  + +   
Sbjct: 429 GKIGNREVLILIDCGATSNFISQDLVVELEIPVIATSEYVVEVG---NGAKERNSGVCKN 485

Query: 210 LRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITVQ--SRGKTHIL 43
           L+L +Q     + F+I+ L G +V+LG+ WL  + G ++A  +++ +Q  S+G+  +L
Sbjct: 486 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASL-GNIEANFQELIIQWVSQGQKMVL 542


>tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein OS=Lotus
           japonicus PE=4 SV=1
          Length = 1558

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = -3

Query: 387 GKVKDQTMLIFFDLGAKANFISPELASKLGIR-LEEMGYTAEAGLACPGHTEAVTPIIGK 211
           GK+ ++ +LI  D GA +NFIS +L  +L I  +    Y  E G    G  E  + +   
Sbjct: 429 GKIGNREVLILIDCGATSNFISQDLVVELEIPVIATSEYVVEVG---NGAKERNSGVCKN 485

Query: 210 LRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITVQ--SRGKTHIL 43
           L+L +Q     + F+I+ L G +V+LG+ WL  + G ++A  +++ +Q  S+G+  +L
Sbjct: 486 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASL-GNIEANFQELIIQWVSQGQKMVL 542


>tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein OS=Lotus
           japonicus PE=4 SV=1
          Length = 1558

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = -3

Query: 387 GKVKDQTMLIFFDLGAKANFISPELASKLGIR-LEEMGYTAEAGLACPGHTEAVTPIIGK 211
           GK+ ++ +LI  D GA +NFIS +L  +L I  +    Y  E G    G  E  + +   
Sbjct: 429 GKIGNREVLILIDCGATSNFISQDLVVELEIPVIATSEYVVEVG---NGAKERNSGVCKN 485

Query: 210 LRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITVQ--SRGKTHIL 43
           L+L +Q     + F+I+ L G +V+LG+ WL  + G ++A  +++ +Q  S+G+  +L
Sbjct: 486 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASL-GNIEANFQELIIQWVSQGQKMVL 542


>tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein OS=Lotus
           japonicus PE=4 SV=1
          Length = 1558

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = -3

Query: 387 GKVKDQTMLIFFDLGAKANFISPELASKLGIR-LEEMGYTAEAGLACPGHTEAVTPIIGK 211
           GK+ ++ +LI  D GA +NFIS +L  +L I  +    Y  E G    G  E  + +   
Sbjct: 429 GKIGNREVLILIDCGATSNFISQDLVVELEIPVIATSEYVVEVG---NGAKERNSGVCKN 485

Query: 210 LRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITVQ--SRGKTHIL 43
           L+L +Q     + F+I+ L G +V+LG+ WL  + G ++A  +++ +Q  S+G+  +L
Sbjct: 486 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASL-GNIEANFQELIIQWVSQGQKMVL 542


>tr|Q01LV8|Q01LV8_ORYSA OSIGBa0139I12.6 protein OS=Oryza sativa
           GN=OSIGBa0139I12.6 PE=4 SV=1
          Length = 1443

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 32/117 (27%), Positives = 54/117 (46%)
 Frame = -3

Query: 414 NASELCRAWGKVKDQTMLIFFDLGAKANFISPELASKLGIRLEEMGYTAEAGLACPGHTE 235
           NA ++      V      + FD GA  +F+S   ASK GI +  +G         PG+  
Sbjct: 329 NAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGIEVVSLGRPLLVNT--PGNQV 386

Query: 234 AVTPIIGKLRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITVQS 64
             T     + + I+  +      ++     DV+LG+ WL R +G++D  N+K+T+ S
Sbjct: 387 FSTQYCPSVTIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTS 443


>tr|B5U9V7|B5U9V7_LOTJA Putative uncharacterized protein OS=Lotus
           japonicus PE=4 SV=1
          Length = 1520

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
 Frame = -3

Query: 387 GKVKDQTMLIFFDLGAKANFISPELASKLGIR-LEEMGYTAEAGLACPGHTEAVTPIIGK 211
           GK+ ++ +LI  D GA  NFIS +L  +L I  +    Y  E G    G  E  + +   
Sbjct: 391 GKIGNREVLILIDCGATINFISQDLVVELEIPVIATSEYVVEVG---NGAKERNSGVCKN 447

Query: 210 LRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITVQ--SRGKTHIL 43
           L+L +Q     + F+I+ L G +V+LG+ WL  + G ++A  +++ +Q  S+G+  +L
Sbjct: 448 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASL-GNIEANFQELIIQWVSQGQKMVL 504


>tr|Q01M65|Q01M65_ORYSA OSIGBa0097I11.2 protein OS=Oryza sativa
           GN=OSIGBa0097I11.2 PE=4 SV=1
          Length = 1527

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = -3

Query: 414 NASELCRAWGKVKDQTMLIFFDLGAKANFISPELASKLGIRLEEMGYTAEAGLACPGHTE 235
           NA ++      V      + FD GA  +F+S   ASK G+ +  +G         PG+  
Sbjct: 627 NAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNT--PGNQV 684

Query: 234 AVTPIIGKLRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITV-QSRG 58
             T     + + I+  +      ++     DV+LG+ WL R +G++D  N+K+T+  S G
Sbjct: 685 FSTQYCPSVTIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTNSNG 744

Query: 57  KT 52
           +T
Sbjct: 745 ET 746


>tr|Q01M64|Q01M64_ORYSA OSIGBa0097I11.3 protein OS=Oryza sativa
           GN=OSIGBa0097I11.3 PE=4 SV=1
          Length = 1477

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = -3

Query: 414 NASELCRAWGKVKDQTMLIFFDLGAKANFISPELASKLGIRLEEMGYTAEAGLACPGHTE 235
           NA ++      V      + FD GA  +F+S   ASK G+ +  +G         PG+  
Sbjct: 577 NAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNT--PGNQV 634

Query: 234 AVTPIIGKLRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITV-QSRG 58
             T     + + I+  +      ++     DV+LG+ WL R +G++D  N+K+T+  S G
Sbjct: 635 FSTQYCPSVTIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTNSNG 694

Query: 57  KT 52
           +T
Sbjct: 695 ET 696


>tr|Q01LT3|Q01LT3_ORYSA OSIGBa0116O04.4 protein OS=Oryza sativa
           GN=OSIGBa0116O04.4 PE=4 SV=1
          Length = 1527

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = -3

Query: 414 NASELCRAWGKVKDQTMLIFFDLGAKANFISPELASKLGIRLEEMGYTAEAGLACPGHTE 235
           NA ++      V      + FD GA  +F+S   ASK G+ +  +G         PG+  
Sbjct: 627 NAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNT--PGNQV 684

Query: 234 AVTPIIGKLRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITV-QSRG 58
             T     + + I+  +      ++     DV+LG+ WL R +G++D  N+K+T+  S G
Sbjct: 685 FSTQYCPSVTIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTNSNG 744

Query: 57  KT 52
           +T
Sbjct: 745 ET 746


>tr|Q01LT2|Q01LT2_ORYSA OSIGBa0116O04.5 protein OS=Oryza sativa
           GN=OSIGBa0116O04.5 PE=4 SV=1
          Length = 1477

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = -3

Query: 414 NASELCRAWGKVKDQTMLIFFDLGAKANFISPELASKLGIRLEEMGYTAEAGLACPGHTE 235
           NA ++      V      + FD GA  +F+S   ASK G+ +  +G         PG+  
Sbjct: 577 NAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNT--PGNQV 634

Query: 234 AVTPIIGKLRLHIQSYVDAEEFYIMPLDGCDVLLGIPWLFRVQGILDAYNKKITV-QSRG 58
             T     + + I+  +      ++     DV+LG+ WL R +G++D  N+K+T+  S G
Sbjct: 635 FSTQYCPSVTIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTNSNG 694

Query: 57  KT 52
           +T
Sbjct: 695 ET 696