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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920513
Clone id YMU001_000138_A05
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_A05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACAATCCTTGACCTTACCATTCTCATTCCGGATTATGTCCCTCCAACGATTTTGATTCTC
ATTGTTGTTACTGTTTCCTATTACTTAATCCCATGTCGACCCACCTTCCCCATAACTAAG
TCAAAAACTATATAGTACGTAGGACCAATAAATTCCCTTACGTAATCCAGCTACCATAAA
CATAAATTCATCTATAACTAGCAACATCATGTAACAAGCAAAAGCAACCCACTTTTTGAT
GCACATGAATAAGCACAAAGGTGTTGAAAGCTAGCAGCCTACAATATGCCTAACTGATTT
CCTTCACAACTTCGGCCCAATAAATTCTTTATGACCATGTCAGAAGGACAAACAACATTC
TTCAAGCCAAATGTGTGCCTTGACACTCCTTCTACAATGTTCTTAATTTGCCAAAGTCAC
TTTTCCATTGTTTACACTAATCAAAACCAGTCACGTTGCTCAATGCATCCTC
■■Homology search results ■■ -
sp_hit_id P32791
Definition sp|P32791|FRE1_YEAST Ferric/cupric reductase transmembrane component 1 OS=Saccharomyces cerevisiae
Align length 33
Score (bit) 29.3
E-value 9.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920513|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_A05.
         (472 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P32791|FRE1_YEAST Ferric/cupric reductase transmembrane compo...    29   9.3  

>sp|P32791|FRE1_YEAST Ferric/cupric reductase transmembrane
           component 1 OS=Saccharomyces cerevisiae GN=FRE1 PE=1
           SV=1
          Length = 686

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 234 KWVAFACYMMLLVIDEFMFMVAGLRKGIYWSYV 136
           KW A+ C+ ML V+   +   +G+++G++ S V
Sbjct: 295 KWSAYVCF-MLAVVHSIVMTASGVKRGVFQSLV 326
tr_hit_id A8GLU2
Definition tr|A8GLU2|A8GLU2_RICAH Putative uncharacterized protein OS=Rickettsia akari (strain Hartford)
Align length 69
Score (bit) 32.7
E-value 9.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920513|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_A05.
         (472 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8GLU2|A8GLU2_RICAH Putative uncharacterized protein OS=Ricke...    33   9.3  

>tr|A8GLU2|A8GLU2_RICAH Putative uncharacterized protein
           OS=Rickettsia akari (strain Hartford) GN=A1C_00160 PE=4
           SV=1
          Length = 222

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = -2

Query: 327 EFIGPKL*RKSVRHIVGC*LSTPLCLFMC---IKKWVAFACYMMLLVIDEFMFMVAGLRK 157
           E IG  +  + +R I+ C +S  + L +C   + K++A   +M    ID F+  +AG   
Sbjct: 51  ELIGKYMENEVIRIIIACIISYLVSLILCVFIVYKFLAIISFMRNGFIDRFLGSLAGFAV 110

Query: 156 GIYWSYVLY 130
           G   S VL+
Sbjct: 111 GTTISLVLF 119