BP920514 |
Clone id |
YMU001_000138_A08 |
Library |
YMU01 |
Length |
486 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000138_A08. |
Accession |
BP920514 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACTAGGCCAACTTTGACAGCTTCTCCATTTTGGTACGCCTCAACCACCTCAACCATTTTG GTAGGCCAACTTTGACAGCTTCTCCATTTTGGTACGCCTCAACCACAGGCGAGGGTTTGT GGTGGTACCTACTTTGAACCACCTCAACCTCAGCCTCAGCCTAACAAAGGATGTCAAGCA CAATGGGCTCGGCTCATTCATCTTTCGCTAGAGAATCAAACTCTTGAGCTACCTAATTTT TTGTCAAAGAGCCTCCGAAGAAGATAAACTTGAAGAACACTGGCTCCAATAAGGGCAAGG GCTTCCCACACCGCCTTATATACAAGCCGTTTCCCAAGTTTCTCATTCAATGTAGCCTGC CTTTCTGTTTGCGCATAAAGCCAGTGCTGTTCGAATTGCACGGAATAAATTGCCTCTTCA AGCCGTGCAATCTGGCCCATGAGAGGGTCAATATGATCATCTTTAGCTTTTTCATCGTCG TAAACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O35587 |
Definition |
sp|O35587|TMEDA_MESAU Transmembrane protein Tmp21 OS=Mesocricetus auratus |
Align length |
80 |
Score (bit) |
46.2 |
E-value |
8.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q9A0 |
Definition |
tr|A7Q9A0|A7Q9A0_VITVI Chromosome chr19 scaffold_66, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
88 |
Score (bit) |
126.0 |
E-value |
5.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920514|Adiantum capillus-veneris mRNA, clone: YMU001_000138_A08. (486 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q9A0|A7Q9A0_VITVI Chromosome chr19 scaffold_66, whole genom... 126 5e-28 tr|Q9S7M9|Q9S7M9_ARATH Putative coated vesicle membrane protein ... 125 1e-27 tr|Q8L987|Q8L987_ARATH Putative coated vesicle membrane protein ... 125 1e-27 tr|A7Q2Y1|A7Q2Y1_VITVI Chromosome chr12 scaffold_47, whole genom... 123 5e-27 tr|A0MAU7|A0MAU7_WHEAT Coated vesicle membrane protein-like OS=T... 122 9e-27 tr|Q6YZD2|Q6YZD2_ORYSJ Os08g0532900 protein OS=Oryza sativa subs... 120 3e-26 tr|A2YXG3|A2YXG3_ORYSI Putative uncharacterized protein OS=Oryza... 120 3e-26 tr|A9TN56|A9TN56_PHYPA Predicted protein OS=Physcomitrella paten... 120 3e-26 tr|A9P981|A9P981_POPTR Putative uncharacterized protein OS=Popul... 120 3e-26 tr|A9SKH6|A9SKH6_PHYPA Predicted protein OS=Physcomitrella paten... 120 4e-26 tr|B6TE63|B6TE63_MAIZE Transmembrane emp24 domain-containing pro... 119 7e-26 tr|B4FE73|B4FE73_MAIZE Putative uncharacterized protein OS=Zea m... 119 7e-26 tr|B6SUS5|B6SUS5_MAIZE Transmembrane emp24 domain-containing pro... 119 1e-25 tr|Q0J0I4|Q0J0I4_ORYSJ Os09g0507600 protein OS=Oryza sativa subs... 116 5e-25 tr|A2Z2X8|A2Z2X8_ORYSI Putative uncharacterized protein OS=Oryza... 114 3e-24 tr|A9SXC5|A9SXC5_PHYPA Predicted protein OS=Physcomitrella paten... 73 8e-12 tr|B4FV79|B4FV79_MAIZE Putative uncharacterized protein OS=Zea m... 72 2e-11 tr|Q84MP2|Q84MP2_ORYSJ Os03g0744800 protein OS=Oryza sativa subs... 71 2e-11 tr|A3AML5|A3AML5_ORYSJ Putative uncharacterized protein OS=Oryza... 71 2e-11 tr|A2XLX1|A2XLX1_ORYSI Putative uncharacterized protein OS=Oryza... 71 2e-11 tr|B4FIW7|B4FIW7_MAIZE Putative uncharacterized protein OS=Zea m... 69 9e-11 tr|A9NNL1|A9NNL1_PICSI Putative uncharacterized protein OS=Picea... 69 1e-10 tr|Q9LIL4|Q9LIL4_ARATH Coated vesicle membrane protein-like (AT3... 66 7e-10 tr|A7NWU4|A7NWU4_VITVI Chromosome chr5 scaffold_2, whole genome ... 66 7e-10 tr|A9T3W4|A9T3W4_PHYPA Predicted protein OS=Physcomitrella paten... 65 2e-09 tr|A7PUH6|A7PUH6_VITVI Chromosome chr7 scaffold_31, whole genome... 64 5e-09 tr|A5BNW4|A5BNW4_VITVI Putative uncharacterized protein OS=Vitis... 64 5e-09 tr|A5AV45|A5AV45_VITVI Putative uncharacterized protein OS=Vitis... 63 6e-09 tr|A9RFU0|A9RFU0_PHYPA Predicted protein OS=Physcomitrella paten... 62 2e-08 tr|Q53GF9|Q53GF9_HUMAN Full-length cDNA 5-PRIME end of clone CS0... 46 0.001
>tr|A7Q9A0|A7Q9A0_VITVI Chromosome chr19 scaffold_66, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033393001 PE=3 SV=1 Length = 211
Score = 126 bits (317), Expect = 5e-28 Identities = 58/88 (65%), Positives = 77/88 (87%) Frame = -2
Query: 482 YDDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWE 303 Y D+ AKD+H +PL+ QI++LEEA+Y++QFEQHWL AQTERQA +N+ + +R VYKA +E Sbjct: 124 YYDQHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQARVNDAMNRRAVYKAFYE 183
Query: 302 ALALIGASVLQVYLLRRLFDKKLGSSRV 219 + ALIGAS+LQVYLLRRLF++KLG+SRV Sbjct: 184 SAALIGASILQVYLLRRLFERKLGTSRV 211
>tr|Q9S7M9|Q9S7M9_ARATH Putative coated vesicle membrane protein OS=Arabidopsis thaliana GN=MLP3.13 PE=2 SV=1 Length = 208
Score = 125 bits (313), Expect = 1e-27 Identities = 59/88 (67%), Positives = 75/88 (85%) Frame = -2
Query: 482 YDDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWE 303 Y D+ AKD+H PLM QI++LEEA+Y++QFEQHWL AQT+RQA +NE + KR V+KA++E Sbjct: 121 YYDQHAKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFE 180
Query: 302 ALALIGASVLQVYLLRRLFDKKLGSSRV 219 + ALIGAS LQVYLLRRLF++KLG SRV Sbjct: 181 SFALIGASFLQVYLLRRLFERKLGMSRV 208
>tr|Q8L987|Q8L987_ARATH Putative coated vesicle membrane protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 208
Score = 125 bits (313), Expect = 1e-27 Identities = 59/88 (67%), Positives = 75/88 (85%) Frame = -2
Query: 482 YDDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWE 303 Y D+ AKD+H PLM QI++LEEA+Y++QFEQHWL AQT+RQA +NE + KR V+KA++E Sbjct: 121 YYDQHAKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFE 180
Query: 302 ALALIGASVLQVYLLRRLFDKKLGSSRV 219 + ALIGAS LQVYLLRRLF++KLG SRV Sbjct: 181 SFALIGASFLQVYLLRRLFERKLGMSRV 208
>tr|A7Q2Y1|A7Q2Y1_VITVI Chromosome chr12 scaffold_47, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029074001 PE=3 SV=1 Length = 214
Score = 123 bits (308), Expect = 5e-27 Identities = 56/88 (63%), Positives = 78/88 (88%) Frame = -2
Query: 482 YDDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWE 303 Y D+ AKD+H +PL+ QIA+LEEA+Y++QFEQHWL AQT+RQA +NE + +R V+KA++E Sbjct: 127 YYDQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNEGMSQRAVHKAMFE 186
Query: 302 ALALIGASVLQVYLLRRLFDKKLGSSRV 219 ++AL+GASVLQ+YLL+RLF++KLG SRV Sbjct: 187 SVALVGASVLQIYLLQRLFERKLGISRV 214
>tr|A0MAU7|A0MAU7_WHEAT Coated vesicle membrane protein-like OS=Triticum aestivum PE=2 SV=1 Length = 212
Score = 122 bits (306), Expect = 9e-27 Identities = 56/88 (63%), Positives = 75/88 (85%) Frame = -2
Query: 482 YDDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWE 303 Y D+ AKD+H PL QIA+L+EA+Y++QFEQHWL AQT+RQA LNE + +R ++KA++E Sbjct: 125 YFDQHAKDEHFSPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAIHKALFE 184
Query: 302 ALALIGASVLQVYLLRRLFDKKLGSSRV 219 + ALI ASV+QVYLLRRLF++KLG+SRV Sbjct: 185 SAALIAASVIQVYLLRRLFERKLGTSRV 212
>tr|Q6YZD2|Q6YZD2_ORYSJ Os08g0532900 protein OS=Oryza sativa subsp. japonica GN=P0702E04.27 PE=2 SV=1 Length = 212
Score = 120 bits (302), Expect = 3e-26 Identities = 57/88 (64%), Positives = 74/88 (84%) Frame = -2
Query: 482 YDDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWE 303 Y D+ AKD+H PL QIA+L+EA+Y++QFEQHWL AQT+RQA LNE + +R V+KA+ E Sbjct: 125 YFDQHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHKALLE 184
Query: 302 ALALIGASVLQVYLLRRLFDKKLGSSRV 219 + ALI ASV+QVYLLRRLF++KLG+SRV Sbjct: 185 SAALIAASVIQVYLLRRLFERKLGTSRV 212
>tr|A2YXG3|A2YXG3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30027 PE=3 SV=1 Length = 212
Score = 120 bits (302), Expect = 3e-26 Identities = 57/88 (64%), Positives = 74/88 (84%) Frame = -2
Query: 482 YDDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWE 303 Y D+ AKD+H PL QIA+L+EA+Y++QFEQHWL AQT+RQA LNE + +R V+KA+ E Sbjct: 125 YFDQHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHKALLE 184
Query: 302 ALALIGASVLQVYLLRRLFDKKLGSSRV 219 + ALI ASV+QVYLLRRLF++KLG+SRV Sbjct: 185 SAALIAASVIQVYLLRRLFERKLGTSRV 212
>tr|A9TN56|A9TN56_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148040 PE=3 SV=1 Length = 219
Score = 120 bits (301), Expect = 3e-26 Identities = 59/88 (67%), Positives = 74/88 (84%), Gaps = 1/88 (1%) Frame = -2
Query: 479 DDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWEA 300 D + KD+HIDPL+ QI RLEE++YS+QFEQHWL AQT+RQ +N+ + KRL+YKA+ EA Sbjct: 132 DVQLVKDEHIDPLIWQIERLEESLYSIQFEQHWLLAQTDRQEIVNDAMSKRLIYKAILEA 191
Query: 299 LALIGASVLQVYLLRRLFDKKLG-SSRV 219 LAL+G SV+QV LLRRLF+KKLG SSRV Sbjct: 192 LALVGCSVVQVVLLRRLFEKKLGQSSRV 219
>tr|A9P981|A9P981_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 213
Score = 120 bits (301), Expect = 3e-26 Identities = 54/88 (61%), Positives = 74/88 (84%) Frame = -2
Query: 482 YDDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWE 303 Y DE AKD+H PL+ QI++LEEA+Y++QFEQHWL AQT+RQA +N+ + +R ++KA +E Sbjct: 126 YYDEHAKDEHFQPLLEQISKLEEALYNIQFEQHWLEAQTDRQAIINDAMSRRTIHKAFFE 185
Query: 302 ALALIGASVLQVYLLRRLFDKKLGSSRV 219 + AL+ AS+LQVYLLRRLF++KLG SRV Sbjct: 186 SAALVAASILQVYLLRRLFERKLGMSRV 213
>tr|A9SKH6|A9SKH6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_131440 PE=3 SV=1 Length = 219
Score = 120 bits (300), Expect = 4e-26 Identities = 57/87 (65%), Positives = 73/87 (83%) Frame = -2
Query: 479 DDEKAKDDHIDPLMGQIARLEEAIYSVQFEQHWLYAQTERQATLNEKLGKRLVYKAVWEA 300 D+E KD+HI+PLM QI LEE++YS+QFEQHWL AQT++Q +N+ + +R+VYKA+ EA Sbjct: 133 DEEHVKDEHIEPLMMQIESLEESLYSIQFEQHWLLAQTDQQEIVNKAMSRRVVYKAMLEA 192
Query: 299 LALIGASVLQVYLLRRLFDKKLGSSRV 219 LAL+G SVLQV LLRRLF+KKLG SRV Sbjct: 193 LALMGCSVLQVVLLRRLFEKKLGQSRV 219
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