BP920517 |
Clone id |
YMU001_000138_A12 |
Library |
YMU01 |
Length |
405 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000138_A12. |
Accession |
BP920517 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2479Contig1 |
Sequence |
AATGATTGGCCTGTTTCAACCATCAGTAGCTAGCGGAGCAGTTGAATCTGATCGTACTGC AAGATTTTTAAGCTACATAGAGGATTTAGAGAAGCGTGGGGGAGGACAGCAGGTTCCAGA ATTTCAGCCACAGCTAGAATGGCTCAACACAGCTCCTCTAAAGTTACAGAAGGATTTGGC TGGAAAGGTAGTCGTTTAAGATTTTTGGACTTATTGCTGCATAAATTGCATGCATATTCT TCCAGATTTAGAGTACCTGTAAAAAAAGTACAATGATAGACCGCTGTCAGTGGTTGGTGT CCACTCTGCAAAGTTCGATAATGATAAGGATCTGAATGCTATTCGGAATGCTGTTCGGAG ATACAATGTCACACATCCGGTGGTGAATGATGATGATATGGTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BZW8 |
Definition |
sp|Q8BZW8|NHLC2_MOUSE NHL repeat-containing protein 2 OS=Mus musculus |
Align length |
109 |
Score (bit) |
128.0 |
E-value |
8.0e-30 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SEV6 |
Definition |
tr|A9SEV6|A9SEV6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
131 |
Score (bit) |
189.0 |
E-value |
6.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920517|Adiantum capillus-veneris mRNA, clone: YMU001_000138_A12. (405 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SEV6|A9SEV6_PHYPA Predicted protein OS=Physcomitrella paten... 189 6e-47 tr|A7PRQ1|A7PRQ1_VITVI Chromosome chr14 scaffold_27, whole genom... 181 1e-44 tr|Q9C7X1|Q9C7X1_ARATH Putative uncharacterized protein F13N6.21... 176 4e-43 tr|Q8VZ10|Q8VZ10_ARATH Putative uncharacterized protein At1g5650... 176 4e-43 tr|Q0DSF3|Q0DSF3_ORYSJ Os03g0311300 protein (Fragment) OS=Oryza ... 170 4e-41 tr|B8AI99|B8AI99_ORYSI Putative uncharacterized protein OS=Oryza... 170 4e-41 tr|A5BN38|A5BN38_VITVI Putative uncharacterized protein OS=Vitis... 160 2e-38 tr|Q10ME8|Q10ME8_ORYSJ HAD-superfamily hydrolase, subfamily IA, ... 138 1e-31 tr|Q10ME7|Q10ME7_ORYSJ HAD-superfamily hydrolase, subfamily IA, ... 138 1e-31 tr|A3AHA2|A3AHA2_ORYSJ Putative uncharacterized protein OS=Oryza... 138 1e-31 tr|Q4RG76|Q4RG76_TETNG Chromosome 2 SCAF15106, whole genome shot... 128 1e-28 tr|Q9CW64|Q9CW64_MOUSE Putative uncharacterized protein (Fragmen... 128 1e-28 tr|B2RR26|B2RR26_MOUSE NHL repeat containing 2 OS=Mus musculus G... 128 1e-28 tr|A6CB17|A6CB17_9PLAN Putative uncharacterized protein OS=Planc... 121 2e-26 tr|A0ZAP2|A0ZAP2_NODSP NHL repeat protein OS=Nodularia spumigena... 119 1e-25 tr|Q7NNM4|Q7NNM4_GLOVI Gll0387 protein OS=Gloeobacter violaceus ... 117 3e-25 tr|Q8YY39|Q8YY39_ANASP Alr1013 protein OS=Anabaena sp. (strain P... 114 2e-24 tr|Q3M6W0|Q3M6W0_ANAVT NHL repeat OS=Anabaena variabilis (strain... 112 7e-24 tr|B2J486|B2J486_NOSP7 Redoxin domain protein OS=Nostoc punctifo... 112 7e-24 tr|B4W485|B4W485_9CYAN Redoxin family OS=Microcoleus chthonoplas... 112 7e-24 tr|Q7Q8Q9|Q7Q8Q9_ANOGA AGAP010610-PA (Fragment) OS=Anopheles gam... 111 2e-23 tr|B0XF45|B0XF45_CULQU NHL repeat containing 2 OS=Culex quinquef... 110 3e-23 tr|A7RH97|A7RH97_NEMVE Predicted protein OS=Nematostella vectens... 110 4e-23 tr|B6AMF4|B6AMF4_9BACT NHL repeat domain protein OS=Leptospirill... 110 5e-23 tr|A3EPU1|A3EPU1_9BACT Putative uncharacterized protein OS=Lepto... 110 5e-23 tr|Q17MM7|Q17MM7_AEDAE Putative uncharacterized protein OS=Aedes... 110 5e-23 tr|A0B8N4|A0B8N4_METTP NHL repeat containing protein OS=Methanos... 102 1e-20 tr|A4A166|A4A166_9PLAN NHL repeat protein OS=Blastopirellula mar... 100 3e-20 tr|A7GGY4|A7GGY4_CLOBL NHL repeat protein OS=Clostridium botulin... 100 4e-20 tr|B1KYI2|B1KYI2_CLOBM NHL repeat protein OS=Clostridium botulin... 100 5e-20
>tr|A9SEV6|A9SEV6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_128572 PE=4 SV=1 Length = 1040
Score = 189 bits (480), Expect = 6e-47 Identities = 90/131 (68%), Positives = 107/131 (81%) Frame = +2
Query: 8 GLFQPSVASGAVESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLNTAPLKLQKDLAGK 187 G+ QP +A+G S+R +F YI D+E + GQ VPEFQP+LEWLNTAPL L+KDL GK Sbjct: 341 GVGQPLLANG---SERVRQFKQYITDIESKYAGQVVPEFQPKLEWLNTAPLSLKKDLKGK 397
Query: 188 VVV*DFWTYCCINCMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLNAIRNAVRRYN 367 VVV DFWTYCCINCMHILPDL +L KKY D+P++V+GVHSAKFDN+KD AIRNAV RY+ Sbjct: 398 VVVLDFWTYCCINCMHILPDLAFLEKKYKDQPMTVIGVHSAKFDNEKDSAAIRNAVLRYD 457
Query: 368 VTHPVVNDDDM 400 VTHPVVND +M Sbjct: 458 VTHPVVNDGEM 468
>tr|A7PRQ1|A7PRQ1_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022589001 PE=4 SV=1 Length = 1054
Score = 181 bits (460), Expect = 1e-44 Identities = 85/135 (62%), Positives = 103/135 (76%), Gaps = 2/135 (1%) Frame = +2
Query: 2 MIGLFQPSVASGAVESD--RTARFLSYIEDLEKRGGGQQVPEFQPQLEWLNTAPLKLQKD 175 + G+ +P+ ES R +F++YI DLE RG VPEF QL+WLN+APL+L++D Sbjct: 362 LFGVNRPTFGKNEGESQTGRIQQFVNYISDLESRGNATTVPEFPSQLDWLNSAPLQLRRD 421
Query: 176 LAGKVVV*DFWTYCCINCMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLNAIRNAV 355 L GKVVV DFWTYCCINCMH+LPDLE+L KY D+P +VVGVHSAKFDN+KDL AIRNAV Sbjct: 422 LKGKVVVLDFWTYCCINCMHVLPDLEFLETKYKDKPFTVVGVHSAKFDNEKDLEAIRNAV 481
Query: 356 RRYNVTHPVVNDDDM 400 RY + HPVVND DM Sbjct: 482 LRYGINHPVVNDGDM 496
>tr|Q9C7X1|Q9C7X1_ARATH Putative uncharacterized protein F13N6.21 OS=Arabidopsis thaliana GN=F13N6.21 PE=4 SV=1 Length = 1041
Score = 176 bits (447), Expect = 4e-43 Identities = 82/133 (61%), Positives = 101/133 (75%) Frame = +2
Query: 2 MIGLFQPSVASGAVESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLNTAPLKLQKDLA 181 ++G PS E R +F+ YI DLE + VPEF +L+WLNTAPL+ ++DL Sbjct: 360 LVGAKSPSFTQNQGEG-RVQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLK 418
Query: 182 GKVVV*DFWTYCCINCMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLNAIRNAVRR 361 GKVV+ DFWTYCCINCMH+LPDLE+L KKY D P +VVGVHSAKFDN+KDL+AIRNAV R Sbjct: 419 GKVVILDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLDAIRNAVLR 478
Query: 362 YNVTHPVVNDDDM 400 Y+++HPVVND DM Sbjct: 479 YDISHPVVNDGDM 491
>tr|Q8VZ10|Q8VZ10_ARATH Putative uncharacterized protein At1g56500 OS=Arabidopsis thaliana GN=At1g56500 PE=2 SV=1 Length = 1055
Score = 176 bits (447), Expect = 4e-43 Identities = 82/133 (61%), Positives = 101/133 (75%) Frame = +2
Query: 2 MIGLFQPSVASGAVESDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLNTAPLKLQKDLA 181 ++G PS E R +F+ YI DLE + VPEF +L+WLNTAPL+ ++DL Sbjct: 360 LVGAKSPSFTQNQGEG-RVQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLK 418
Query: 182 GKVVV*DFWTYCCINCMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLNAIRNAVRR 361 GKVV+ DFWTYCCINCMH+LPDLE+L KKY D P +VVGVHSAKFDN+KDL+AIRNAV R Sbjct: 419 GKVVILDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLDAIRNAVLR 478
Query: 362 YNVTHPVVNDDDM 400 Y+++HPVVND DM Sbjct: 479 YDISHPVVNDGDM 491
>tr|Q0DSF3|Q0DSF3_ORYSJ Os03g0311300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0311300 PE=4 SV=1 Length = 425
Score = 170 bits (430), Expect = 4e-41 Identities = 76/118 (64%), Positives = 92/118 (77%) Frame = +2
Query: 47 SDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLNTAPLKLQKDLAGKVVV*DFWTYCCIN 226 + R + Y+ D E G VPEF +L+WLNTAPL+ +DL G+VV+ DFWTYCCIN Sbjct: 68 TSRVQQIKKYLADFETGGSATCVPEFPRKLDWLNTAPLQFGRDLKGRVVLLDFWTYCCIN 127
Query: 227 CMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLNAIRNAVRRYNVTHPVVNDDDM 400 CMH+LPDLE++ KKY D+P +VVGVHSAKFDN+KDL AIRNAV RYN+THPVVND DM Sbjct: 128 CMHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDM 185
>tr|B8AI99|B8AI99_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07299 PE=4 SV=1 Length = 1103
Score = 170 bits (430), Expect = 4e-41 Identities = 76/118 (64%), Positives = 92/118 (77%) Frame = +2
Query: 47 SDRTARFLSYIEDLEKRGGGQQVPEFQPQLEWLNTAPLKLQKDLAGKVVV*DFWTYCCIN 226 + R + Y+ D E G VPEF +L+WLNTAPL+ +DL G+VV+ DFWTYCCIN Sbjct: 391 TSRVQQIKKYLADFETGGSATCVPEFPRKLDWLNTAPLQFGRDLKGRVVLLDFWTYCCIN 450
Query: 227 CMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLNAIRNAVRRYNVTHPVVNDDDM 400 CMH+LPDLE++ KKY D+P +VVGVHSAKFDN+KDL AIRNAV RYN+THPVVND DM Sbjct: 451 CMHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDM 508
>tr|A5BN38|A5BN38_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030553 PE=4 SV=1 Length = 659
Score = 160 bits (406), Expect = 2e-38 Identities = 78/135 (57%), Positives = 96/135 (71%), Gaps = 2/135 (1%) Frame = +2
Query: 2 MIGLFQPSVASGAVESD--RTARFLSYIEDLEKRGGGQQVPEFQPQLEWLNTAPLKLQKD 175 + G+ +P+ ES R +F++YI DLE F +WLN+APL+L++D Sbjct: 392 LFGVNRPTFGKNEGESQTGRIQQFVNYISDLES--------SFHLNFDWLNSAPLQLRRD 443
Query: 176 LAGKVVV*DFWTYCCINCMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLNAIRNAV 355 L GKVVV DFWTYCCINCMH+LPDLE+L KY D+P +VVGVHSAKFDN+KDL AIRNAV Sbjct: 444 LKGKVVVLDFWTYCCINCMHVLPDLEFLETKYKDKPFTVVGVHSAKFDNEKDLEAIRNAV 503
Query: 356 RRYNVTHPVVNDDDM 400 RY + HPVVND DM Sbjct: 504 LRYGINHPVVNDGDM 518
>tr|Q10ME8|Q10ME8_ORYSJ HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g19760 PE=4 SV=1 Length = 1064
Score = 138 bits (348), Expect = 1e-31 Identities = 61/81 (75%), Positives = 71/81 (87%) Frame = +2
Query: 158 LKLQKDLAGKVVV*DFWTYCCINCMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLN 337 L + KDL G+VV+ DFWTYCCINCMH+LPDLE++ KKY D+P +VVGVHSAKFDN+KDL Sbjct: 416 LLVMKDLKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLE 475
Query: 338 AIRNAVRRYNVTHPVVNDDDM 400 AIRNAV RYN+THPVVND DM Sbjct: 476 AIRNAVLRYNITHPVVNDGDM 496
>tr|Q10ME7|Q10ME7_ORYSJ HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g19760 PE=4 SV=1 Length = 772
Score = 138 bits (348), Expect = 1e-31 Identities = 61/81 (75%), Positives = 71/81 (87%) Frame = +2
Query: 158 LKLQKDLAGKVVV*DFWTYCCINCMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLN 337 L + KDL G+VV+ DFWTYCCINCMH+LPDLE++ KKY D+P +VVGVHSAKFDN+KDL Sbjct: 416 LLVMKDLKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLE 475
Query: 338 AIRNAVRRYNVTHPVVNDDDM 400 AIRNAV RYN+THPVVND DM Sbjct: 476 AIRNAVLRYNITHPVVNDGDM 496
>tr|A3AHA2|A3AHA2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010174 PE=4 SV=1 Length = 1028
Score = 138 bits (348), Expect = 1e-31 Identities = 61/81 (75%), Positives = 71/81 (87%) Frame = +2
Query: 158 LKLQKDLAGKVVV*DFWTYCCINCMHILPDLEYL*KKYNDRPLSVVGVHSAKFDNDKDLN 337 L + KDL G+VV+ DFWTYCCINCMH+LPDLE++ KKY D+P +VVGVHSAKFDN+KDL Sbjct: 330 LLVMKDLKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLE 389
Query: 338 AIRNAVRRYNVTHPVVNDDDM 400 AIRNAV RYN+THPVVND DM Sbjct: 390 AIRNAVLRYNITHPVVNDGDM 410
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