BP920518 |
Clone id |
YMU001_000138_B02 |
Library |
YMU01 |
Length |
503 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000138_B02. |
Accession |
BP920518 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGAGCACTGTTTTGTTAAATTTGGAAAGAGAAGCTCATGTCGAGGATCTGTCGGCTTTA ATGTTGAACGAACAGGAGTGTTCTTCATTTGATGTTGTCGACCTCAACAAGGATGGCCAA CCTCAGTCTAGGCAGCATGCTTTGGGTGATGATAAACCTGAGGAGAACCAGTCGGAAAGC ATTGAAGGCATGTTTGCAAACTTGCCTCGTTTACGTTTCCCATGGATACTGAAGAAGGGG CGGAAACCTAAAAGTCAGCGCGCAGCTGTGATTGAGTCGTTTCAGTCTCTTCCTTACATA TCACCGTATAGGAACTCTCGCGAGCTCGTACTCCCTCCACACAAGACCTTGCAAACTGAC AAGTCTTTGGTGGGTTTGATTCATGAATTCTTGAGTCTTACTTTAGAGAAGAGAGCTACG GTCCAGCAGTTGGAGCTCTTCCAAAGACCATACCGGCTTCCAAATAACTTGGTGGAATTT TTACTCAAATATGATGGCATATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A3DN67 |
Definition |
sp|A3DN67|SYT_STAMF Threonyl-tRNA synthetase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) |
Align length |
101 |
Score (bit) |
33.1 |
E-value |
0.75 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PW14 |
Definition |
tr|A7PW14|A7PW14_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
97 |
Score (bit) |
65.9 |
E-value |
1.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920518|Adiantum capillus-veneris mRNA, clone: YMU001_000138_B02. (503 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PW14|A7PW14_VITVI Chromosome chr8 scaffold_34, whole genome... 66 1e-09 tr|Q2QY72|Q2QY72_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 62 2e-08 tr|Q0IQC7|Q0IQC7_ORYSJ Os12g0130100 protein (Fragment) OS=Oryza ... 62 2e-08 tr|A3CEM8|A3CEM8_ORYSJ Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|A2ZHS7|A2ZHS7_ORYSI Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|Q5ZDJ1|Q5ZDJ1_ORYSJ Amino acid transporter-like OS=Oryza sati... 61 3e-08 tr|Q5XVF2|Q5XVF2_ARATH Putative uncharacterized protein OS=Arabi... 61 3e-08 tr|Q0JL81|Q0JL81_ORYSJ Os01g0617600 protein OS=Oryza sativa subs... 61 3e-08 tr|O64539|O64539_ARATH YUP8H12R.26 protein (Putative uncharacter... 61 3e-08 tr|A2ZVF3|A2ZVF3_ORYSJ Putative uncharacterized protein OS=Oryza... 61 3e-08 tr|A2WSN0|A2WSN0_ORYSI Putative uncharacterized protein OS=Oryza... 61 3e-08 tr|A6MD09|A6MD09_9ORYZ Putative uncharacterized protein OS=Oryza... 61 3e-08 tr|Q9SJW7|Q9SJW7_ARATH Putative uncharacterized protein At2g3129... 60 4e-08 tr|Q570M8|Q570M8_ARATH Putative uncharacterized protein At2g3129... 60 4e-08 tr|A7Q7C7|A7Q7C7_VITVI Chromosome chr18 scaffold_59, whole genom... 60 8e-08 tr|A5C261|A5C261_VITVI Putative uncharacterized protein OS=Vitis... 60 8e-08 tr|Q75HB0|Q75HB0_ORYSJ Expressed protein (Putative uncharacteriz... 59 1e-07 tr|Q2A9E6|Q2A9E6_BRAOL Putative uncharacterized protein OS=Brass... 59 1e-07 tr|Q0DPS2|Q0DPS2_ORYSJ Os03g0667400 protein (Fragment) OS=Oryza ... 59 1e-07 tr|A2XKF0|A2XKF0_ORYSI Putative uncharacterized protein OS=Oryza... 59 1e-07 tr|Q9C590|Q9C590_ARATH Putative uncharacterized protein At5g2197... 57 4e-07 tr|Q6K4X2|Q6K4X2_ORYSJ Tyrosine-specific protein phosphatase-lik... 57 6e-07 tr|Q0E1B9|Q0E1B9_ORYSJ Os02g0464400 protein OS=Oryza sativa subs... 57 6e-07 tr|B8AHI0|B8AHI0_ORYSI Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|A3A6M2|A3A6M2_ORYSJ Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|Q2RAY8|Q2RAY8_ORYSJ D-mannose binding lectin family protein, ... 56 8e-07 tr|Q0IUV4|Q0IUV4_ORYSJ Os11g0132900 protein OS=Oryza sativa subs... 56 8e-07 tr|A2ZB34|A2ZB34_ORYSI Putative uncharacterized protein OS=Oryza... 56 8e-07 tr|A7QVY8|A7QVY8_VITVI Chromosome chr2 scaffold_196, whole genom... 55 1e-06 tr|A2XD81|A2XD81_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06
>tr|A7PW14|A7PW14_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025434001 PE=4 SV=1 Length = 425
Score = 65.9 bits (159), Expect = 1e-09 Identities = 36/97 (37%), Positives = 53/97 (54%) Frame = +1
Query: 211 LRFPWILKKGRKPKSQRAAVIESFQSLPYISPYRNSRELVLPPHKTLQTDKSLVGLIHEF 390 L FP +G + + A +E FQ LPYISPY +SR ++ P+ L +K +VG++HEF Sbjct: 233 LAFPMSFPRGYGAQKKVKAWMEEFQKLPYISPYEDSR--LIDPNSELM-EKRVVGVLHEF 289
Query: 391 LSLTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 LSLT+ K+ L + LP+ +Y GI Sbjct: 290 LSLTIHKKTKRNYLRSLREELNLPHKFTRIFTRYPGI 326
>tr|Q2QY72|Q2QY72_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os12g03630 PE=4 SV=1 Length = 546
Score = 62.0 bits (149), Expect = 2e-08 Identities = 34/95 (35%), Positives = 53/95 (55%) Frame = +1
Query: 217 FPWILKKGRKPKSQRAAVIESFQSLPYISPYRNSRELVLPPHKTLQTDKSLVGLIHEFLS 396 FP G K + + ++Q LPY Y N+ + P H Q +K +VG++HE LS Sbjct: 272 FPINFPTGFKIEKGFREKLGNWQRLPYTKAYENNE--LHPIHNVEQLEKHIVGILHELLS 329
Query: 397 LTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 LT+EK +++ F+RP+ + NL E +LK+ GI Sbjct: 330 LTVEKMIPLERFSHFRRPFDMEVNLRELILKHPGI 364
>tr|Q0IQC7|Q0IQC7_ORYSJ Os12g0130100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os12g0130100 PE=4 SV=1 Length = 216
Score = 62.0 bits (149), Expect = 2e-08 Identities = 34/95 (35%), Positives = 53/95 (55%) Frame = +1
Query: 217 FPWILKKGRKPKSQRAAVIESFQSLPYISPYRNSRELVLPPHKTLQTDKSLVGLIHEFLS 396 FP G K + + ++Q LPY Y N+ + P H Q +K +VG++HE LS Sbjct: 56 FPINFPTGFKIEKGFREKLGNWQRLPYTKAYENNE--LHPIHNVEQLEKHIVGILHELLS 113
Query: 397 LTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 LT+EK +++ F+RP+ + NL E +LK+ GI Sbjct: 114 LTVEKMIPLERFSHFRRPFDMEVNLRELILKHPGI 148
>tr|A3CEM8|A3CEM8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_033750 PE=4 SV=1 Length = 432
Score = 62.0 bits (149), Expect = 2e-08 Identities = 34/95 (35%), Positives = 53/95 (55%) Frame = +1
Query: 217 FPWILKKGRKPKSQRAAVIESFQSLPYISPYRNSRELVLPPHKTLQTDKSLVGLIHEFLS 396 FP G K + + ++Q LPY Y N+ + P H Q +K +VG++HE LS Sbjct: 272 FPINFPTGFKIEKGFREKLGNWQRLPYTKAYENNE--LHPIHNVEQLEKHIVGILHELLS 329
Query: 397 LTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 LT+EK +++ F+RP+ + NL E +LK+ GI Sbjct: 330 LTVEKMIPLERFSHFRRPFDMEVNLRELILKHPGI 364
>tr|A2ZHS7|A2ZHS7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37360 PE=4 SV=1 Length = 372
Score = 61.6 bits (148), Expect = 2e-08 Identities = 34/95 (35%), Positives = 53/95 (55%) Frame = +1
Query: 217 FPWILKKGRKPKSQRAAVIESFQSLPYISPYRNSRELVLPPHKTLQTDKSLVGLIHEFLS 396 FP G K + + ++Q LPY Y N+ + P H Q +K +VG++HE LS Sbjct: 212 FPINFPTGFKIEKGFREKLGNWQRLPYTKAYENNE--LHPIHNVEQLEKHIVGILHELLS 269
Query: 397 LTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 LT+EK +++ F+RP+ + NL E +LK+ GI Sbjct: 270 LTVEKMIPLERFSHFRRPFDMEVNLRELVLKHPGI 304
>tr|Q5ZDJ1|Q5ZDJ1_ORYSJ Amino acid transporter-like OS=Oryza sativa subsp. japonica GN=P0686E09.28 PE=4 SV=1 Length = 879
Score = 61.2 bits (147), Expect = 3e-08 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Frame = +1
Query: 208 RLRFPWILKKGRKPKSQRAAVIESFQSLPYISPYRN-SRELVLPPHKTLQTDKSLVGLIH 384 R FP G K + +Q LPY SPY + S + + +K V +H Sbjct: 668 RFAFPTRFPPGFKIGKYFRIAVWKWQRLPYASPYADVSGHDLRSLEARRRMEKRAVAAVH 727
Query: 385 EFLSLTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 E LSLT+EKR T+++L LF+ +P + EFLLKY GI Sbjct: 728 ELLSLTVEKRTTLERLALFRDALGVPKKIKEFLLKYQGI 766
>tr|Q5XVF2|Q5XVF2_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 413
Score = 61.2 bits (147), Expect = 3e-08 Identities = 36/100 (36%), Positives = 51/100 (51%) Frame = +1
Query: 202 LPRLRFPWILKKGRKPKSQRAAVIESFQSLPYISPYRNSRELVLPPHKTLQTDKSLVGLI 381 L R F G +P + E +Q + + SPY N+R K K +V ++ Sbjct: 259 LGRNAFKISFPPGFRPNASYLEEFEKWQKMEFPSPYLNARRFDAADPKAR---KRVVAVL 315
Query: 382 HEFLSLTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 HE LSLT+EKR T QL+ F Y LP+ L+ L+K+ GI Sbjct: 316 HELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIKHQGI 355
>tr|Q0JL81|Q0JL81_ORYSJ Os01g0617600 protein OS=Oryza sativa subsp. japonica GN=Os01g0617600 PE=4 SV=1 Length = 716
Score = 61.2 bits (147), Expect = 3e-08 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Frame = +1
Query: 208 RLRFPWILKKGRKPKSQRAAVIESFQSLPYISPYRN-SRELVLPPHKTLQTDKSLVGLIH 384 R FP G K + +Q LPY SPY + S + + +K V +H Sbjct: 505 RFAFPTRFPPGFKIGKYFRIAVWKWQRLPYASPYADVSGHDLRSLEARRRMEKRAVAAVH 564
Query: 385 EFLSLTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 E LSLT+EKR T+++L LF+ +P + EFLLKY GI Sbjct: 565 ELLSLTVEKRTTLERLALFRDALGVPKKIKEFLLKYQGI 603
>tr|O64539|O64539_ARATH YUP8H12R.26 protein (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=YUP8H12R.26 PE=2 SV=1 Length = 413
Score = 61.2 bits (147), Expect = 3e-08 Identities = 36/100 (36%), Positives = 51/100 (51%) Frame = +1
Query: 202 LPRLRFPWILKKGRKPKSQRAAVIESFQSLPYISPYRNSRELVLPPHKTLQTDKSLVGLI 381 L R F G +P + E +Q + + SPY N+R K K +V ++ Sbjct: 259 LGRNAFKISFPPGFRPNASYLEEFEKWQKMEFPSPYLNARRFDAADPKAR---KRVVAVL 315
Query: 382 HEFLSLTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 HE LSLT+EKR T QL+ F Y LP+ L+ L+K+ GI Sbjct: 316 HELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIKHQGI 355
>tr|A2ZVF3|A2ZVF3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002525 PE=4 SV=1 Length = 410
Score = 61.2 bits (147), Expect = 3e-08 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Frame = +1
Query: 208 RLRFPWILKKGRKPKSQRAAVIESFQSLPYISPYRN-SRELVLPPHKTLQTDKSLVGLIH 384 R FP G K + +Q LPY SPY + S + + +K V +H Sbjct: 199 RFAFPTRFPPGFKIGKYFRIAVWKWQRLPYASPYADVSGHDLRSLEARRRMEKRAVAAVH 258
Query: 385 EFLSLTLEKRATVQQLELFQRPYRLPNNLVEFLLKYDGI 501 E LSLT+EKR T+++L LF+ +P + EFLLKY GI Sbjct: 259 ELLSLTVEKRTTLERLALFRDALGVPKKIKEFLLKYQGI 297
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