| BP920521 |
| Clone id |
YMU001_000138_B05 |
| Library |
YMU01 |
| Length |
391 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000138_B05. |
| Accession |
BP920521 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CTCTAGCTTTCTCTTCAGTCTGGTGGTTACCCAGGGAGCTATAGGTTGCTCTTCTTCCTT
GTCTTTTGTCAGCTTCAACCAGTCAATCTATGATGGAGGAAGAGGCCACTGGCCCTTAGC
ATGTAGATCTTCATATATCACCTTTGTGAGCATCTCCCCTGCTGCAATGTATGTAGGATT
CGGCGTTCCCATCCTCACAATGTTGTATTGTAGGTACACCGCATAATCAATCTCCCCTGG
CCTGCTTGTTTTCATTGCCCATGTGAACGTTGTTCCAATTGCCGCAGGTAGTGCAGTGTA
CTTTTGAGGCCTTTTGGTGCAAATATGCAAATATTGGTTGTAAAGTTGGCACATGGTTGC
CACCATTGGATCTGCAACATCCTTGAAGGTG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P49384 |
| Definition |
sp|P49384|ADH3_KLULA Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis |
| Align length |
40 |
| Score (bit) |
32.3 |
| E-value |
0.76 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920521|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_B05.
(391 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P49384|ADH3_KLULA Alcohol dehydrogenase 3, mitochondrial OS=K... 32 0.76
sp|O00097|ADH1_PICST Alcohol dehydrogenase 1 OS=Pichia stipitis ... 30 2.9
sp|P46680|AIP1_YEAST Actin-interacting protein 1 OS=Saccharomyce... 30 3.8
sp|P32248|CCR7_HUMAN C-C chemokine receptor type 7 OS=Homo sapie... 30 4.9
sp|P80966|PA21B_OPHHA Phospholipase A2, acidic 1 OS=Ophiophagus ... 30 4.9
sp|Q81N43|Y3374_BACAN UPF0078 membrane protein BA_3374/GBAA3374/... 29 6.4
sp|A5DJQ5|ALG3_PICGU Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl ... 29 6.4
sp|P07246|ADH3_YEAST Alcohol dehydrogenase 3, mitochondrial OS=S... 29 6.4
sp|P81166|PA2A_MICNI Phospholipase A2 OS=Micrurus nigrocinctus P... 29 6.4
sp|P79678|VPL_BPMU Tail sheath protein OS=Enterobacteria phage M... 29 8.4
sp|O42201|RXA_XENLA Retinal homeobox protein Rx-A OS=Xenopus lae... 29 8.4
sp|Q6P6T1|C1S_RAT Complement C1s subcomponent OS=Rattus norvegic... 29 8.4
sp|P14411|PA2X_BUNFA Phospholipase A2 isozyme 10 (Fragment) OS=B... 29 8.4
>sp|P49384|ADH3_KLULA Alcohol dehydrogenase 3, mitochondrial
OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2
Length = 374
Score = 32.3 bits (72), Expect = 0.76
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 213 LQYNIVRMGTPNPTYIAAGEMLTKVIYEDLHA-KGQWPLP 97
L+Y + + P P I + V + DLHA KG WPLP
Sbjct: 45 LEYKDIPVPKPKPNEILINVKYSGVCHTDLHAWKGDWPLP 84
>sp|O00097|ADH1_PICST Alcohol dehydrogenase 1 OS=Pichia stipitis
GN=ADH1 PE=3 SV=1
Length = 348
Score = 30.4 bits (67), Expect = 2.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 213 LQYNIVRMGTPNPTYIAAGEMLTKVIYEDLHA-KGQWPL 100
L Y + + TP P I + V + DLHA KG WPL
Sbjct: 19 LLYKDIPVPTPKPNEILINVKYSGVCHTDLHAWKGDWPL 57
>sp|P46680|AIP1_YEAST Actin-interacting protein 1 OS=Saccharomyces
cerevisiae GN=AIP1 PE=1 SV=1
Length = 615
Score = 30.0 bits (66), Expect = 3.8
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Frame = -2
Query: 186 TPNPTYIAAGEMLTKVIYEDLHAK----GQWPLPPS*ID---WLKLTKDKEEEQ 46
+P+ TYIAAG+++ K++ DL ++ +W S I+ W K EE+
Sbjct: 497 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFHTSKINAISWKPAEKGANEEE 550
>sp|P32248|CCR7_HUMAN C-C chemokine receptor type 7 OS=Homo sapiens
GN=CCR7 PE=1 SV=2
Length = 378
Score = 29.6 bits (65), Expect = 4.9
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +2
Query: 119 ACRSSYIT-----FVSISPAAMYVGFGVPILTMLYC 211
A R S IT F++I A M +GF VP+L M +C
Sbjct: 207 AMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMSFC 242
>sp|P80966|PA21B_OPHHA Phospholipase A2, acidic 1 OS=Ophiophagus
hannah PE=1 SV=2
Length = 151
Score = 29.6 bits (65), Expect = 4.9
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 270 LFQLPQVVQCTFEAF--WCKYANIGCKVG 350
L Q ++QCT F W KYA+ GC G
Sbjct: 29 LIQFGNMIQCTVPGFLSWIKYADYGCYCG 57
>sp|Q81N43|Y3374_BACAN UPF0078 membrane protein
BA_3374/GBAA3374/BAS3128 OS=Bacillus anthracis
GN=BA_3374 PE=3 SV=1
Length = 190
Score = 29.3 bits (64), Expect = 6.4
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 143 FVSISPAAMYVGFGVPILTMLYCRYTA-*SISPGLLVFI 256
F+ +SP + VGF V +LT+L+ +Y + S+ G+ +FI
Sbjct: 111 FLFLSPLGVLVGFVVFVLTLLFTKYVSLSSMLAGIALFI 149
>sp|A5DJQ5|ALG3_PICGU Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl
mannosyltransferase OS=Pichia guilliermondii GN=ALG3
PE=3 SV=2
Length = 475
Score = 29.3 bits (64), Expect = 6.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 370 SNGGNHVPTLQPIFAYLHQKASKVHCTT 287
S+GG +P +Q +F YLH + C T
Sbjct: 128 SSGGEDIPVVQSVFGYLHTLTVLLTCCT 155
>sp|P07246|ADH3_YEAST Alcohol dehydrogenase 3, mitochondrial
OS=Saccharomyces cerevisiae GN=ADH3 PE=1 SV=2
Length = 375
Score = 29.3 bits (64), Expect = 6.4
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 213 LQYNIVRMGTPNPTYIAAGEMLTKVIYEDLHA-KGQWPLP 97
L Y + + P P I + V + DLHA G WPLP
Sbjct: 46 LHYKDIPVPEPKPNEILINVKYSGVCHTDLHAWHGDWPLP 85
>sp|P81166|PA2A_MICNI Phospholipase A2 OS=Micrurus nigrocinctus PE=1
SV=1
Length = 118
Score = 29.3 bits (64), Expect = 6.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 270 LFQLPQVVQCTFEAFWCKYANIGCKVG 350
L+QL +++CT W + N GC G
Sbjct: 2 LYQLKNMIKCTNTRHWVSFTNYGCYCG 28
>sp|P79678|VPL_BPMU Tail sheath protein OS=Enterobacteria phage Mu
GN=L PE=4 SV=1
Length = 495
Score = 28.9 bits (63), Expect = 8.4
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -2
Query: 360 ATMCQLYNQYLHICTKRPQKYTALPA----AIGTTFTWAMKTS 244
AT+C + +Q L I RP + LP A+G FTW+ + +
Sbjct: 305 ATLCAVASQALSIDPARPLQTLTLPGRMPPAVGDRFTWSERNA 347
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q75UM5 |
| Definition |
tr|Q75UM5|Q75UM5_CANBO Alcohol dehydrogenase OS=Candida boidinii |
| Align length |
40 |
| Score (bit) |
34.3 |
| E-value |
3.2 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920521|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_B05.
(391 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q75UM5|Q75UM5_CANBO Alcohol dehydrogenase OS=Candida boidinii... 34 3.2
tr|Q75EJ5|Q75EJ5_ASHGO AAR084Wp OS=Ashbya gossypii GN=AAR084W PE... 34 3.2
tr|Q6XQ71|Q6XQ71_SACKL Alcohol dehydrogenase 4 OS=Saccharomyces ... 34 3.2
tr|Q8YEQ3|Q8YEQ3_BRUME DNA POLYMERASE I OS=Brucella melitensis G... 33 7.1
tr|Q8G329|Q8G329_BRUSU DNA polymerase I OS=Brucella suis GN=polA... 33 7.1
tr|B0CIN6|B0CIN6_BRUSI DNA polymerase I OS=Brucella suis (strain... 33 7.1
tr|A9M768|A9M768_BRUC2 DNA polymerase I OS=Brucella canis (strai... 33 7.1
tr|A5VN63|A5VN63_BRUO2 DNA polymerase I OS=Brucella ovis (strain... 33 7.1
tr|A1U0M6|A1U0M6_MARAV Putative uncharacterized protein OS=Marin... 33 7.1
tr|B0EKK1|B0EKK1_ENTDI Putative uncharacterized protein OS=Entam... 33 7.1
tr|Q6XQ80|Q6XQ80_9SACH Alcohol dehydrogenase 3 OS=Kluyveromyces ... 33 9.3
tr|Q659I1|Q659I1_HANAN Alcohol dehydrogenase OS=Hansenula anomal... 33 9.3
tr|Q659I0|Q659I0_HANAN Mitochondrial alcohol dehydrogenase II OS... 33 9.3
tr|B2R487|B2R487_KLUMA Alcohol dehydrogenase OS=Kluyveromyces ma... 33 9.3
tr|B0D655|B0D655_LACBS Predicted protein OS=Laccaria bicolor (st... 33 9.3
tr|A6RFZ5|A6RFZ5_AJECN Alcohol dehydrogenase I OS=Ajellomyces ca... 33 9.3
tr|A1IIA4|A1IIA4_KLUMA Alcohol dehydrogenase IV OS=Kluyveromyces... 33 9.3
>tr|Q75UM5|Q75UM5_CANBO Alcohol dehydrogenase OS=Candida boidinii
GN=ADH3 PE=3 SV=1
Length = 371
Score = 34.3 bits (77), Expect = 3.2
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 213 LQYNIVRMGTPNPTYIAAGEMLTKVIYEDLHA-KGQWPLP 97
L+Y + + P PT I + V + DLHA KG WPLP
Sbjct: 42 LEYKEIPVPKPKPTEILINVKYSGVCHTDLHAWKGDWPLP 81
>tr|Q75EJ5|Q75EJ5_ASHGO AAR084Wp OS=Ashbya gossypii GN=AAR084W PE=3
SV=1
Length = 385
Score = 34.3 bits (77), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 213 LQYNIVRMGTPNPTYIAAGEMLTKVIYEDLHA-KGQWPLP 97
L+Y + + P PT + + V + DLHA KG WPLP
Sbjct: 56 LEYREIEVPEPKPTELLINVKYSGVCHTDLHAWKGDWPLP 95
>tr|Q6XQ71|Q6XQ71_SACKL Alcohol dehydrogenase 4 OS=Saccharomyces
kluyveri GN=ADH4 PE=3 SV=1
Length = 377
Score = 34.3 bits (77), Expect = 3.2
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 273 TTFTWAMKTSRPGEIDYAV--YLQYNIVRMGTPNPTYIAAGEMLTKVIYEDLHA-KGQWP 103
+T A+ T++ G I Y L+Y + + P P I + V + DLHA KG WP
Sbjct: 26 STVAPAIPTTQKGVIFYESGGKLEYKDIPVPKPKPNEILINVKYSGVCHTDLHAWKGDWP 85
Query: 102 LP 97
LP
Sbjct: 86 LP 87
>tr|Q8YEQ3|Q8YEQ3_BRUME DNA POLYMERASE I OS=Brucella melitensis
GN=BMEI1825 PE=3 SV=1
Length = 994
Score = 33.1 bits (74), Expect = 7.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 195 RMGTPNPTYIAAGEMLTKV-IYEDLHAKGQWPLPPS*IDWLKLTKDKEEEQPIAP-WVTT 22
+MG P + G+ T + EDL A+G PLP +DW +LTK K P ++
Sbjct: 654 KMGLPGASKTKTGQWSTSAQVLEDLAAEGH-PLPRKIVDWRQLTKLKSTYTDALPGFINP 712
Query: 21 RLKR 10
+ KR
Sbjct: 713 QTKR 716
>tr|Q8G329|Q8G329_BRUSU DNA polymerase I OS=Brucella suis GN=polA
PE=3 SV=1
Length = 979
Score = 33.1 bits (74), Expect = 7.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 195 RMGTPNPTYIAAGEMLTKV-IYEDLHAKGQWPLPPS*IDWLKLTKDKEEEQPIAP-WVTT 22
+MG P + G+ T + EDL A+G PLP +DW +LTK K P ++
Sbjct: 639 KMGLPGASKTKTGQWSTSAQVLEDLAAEGH-PLPRKIVDWRQLTKLKSTYTDALPGFINP 697
Query: 21 RLKR 10
+ KR
Sbjct: 698 QTKR 701
>tr|B0CIN6|B0CIN6_BRUSI DNA polymerase I OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=polA PE=4 SV=1
Length = 978
Score = 33.1 bits (74), Expect = 7.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 195 RMGTPNPTYIAAGEMLTKV-IYEDLHAKGQWPLPPS*IDWLKLTKDKEEEQPIAP-WVTT 22
+MG P + G+ T + EDL A+G PLP +DW +LTK K P ++
Sbjct: 638 KMGLPGASKTKTGQWSTSAQVLEDLAAEGH-PLPRKIVDWRQLTKLKSTYTDALPGFINP 696
Query: 21 RLKR 10
+ KR
Sbjct: 697 QTKR 700
>tr|A9M768|A9M768_BRUC2 DNA polymerase I OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=polA PE=4 SV=1
Length = 979
Score = 33.1 bits (74), Expect = 7.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 195 RMGTPNPTYIAAGEMLTKV-IYEDLHAKGQWPLPPS*IDWLKLTKDKEEEQPIAP-WVTT 22
+MG P + G+ T + EDL A+G PLP +DW +LTK K P ++
Sbjct: 639 KMGLPGASKTKTGQWSTSAQVLEDLAAEGH-PLPRKIVDWRQLTKLKSTYTDALPGFINP 697
Query: 21 RLKR 10
+ KR
Sbjct: 698 QTKR 701
>tr|A5VN63|A5VN63_BRUO2 DNA polymerase I OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=polA PE=3 SV=1
Length = 978
Score = 33.1 bits (74), Expect = 7.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 195 RMGTPNPTYIAAGEMLTKV-IYEDLHAKGQWPLPPS*IDWLKLTKDKEEEQPIAP-WVTT 22
+MG P + G+ T + EDL A+G PLP +DW +LTK K P ++
Sbjct: 638 KMGLPGASKTKTGQWSTSAQVLEDLAAEGH-PLPRKIVDWRQLTKLKSTYTDALPGFINP 696
Query: 21 RLKR 10
+ KR
Sbjct: 697 QTKR 700
>tr|A1U0M6|A1U0M6_MARAV Putative uncharacterized protein
OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM
11845 / VT8) GN=Maqu_1460 PE=3 SV=1
Length = 391
Score = 33.1 bits (74), Expect = 7.1
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = -2
Query: 303 KYTALPAAIGTTFTWAMKTSRPGEIDYAVYLQYNIVRMGTPNPTYIAAGEMLTKVIYEDL 124
K TAL A + + M + R G++ A L +VRMGTP + G K+ E +
Sbjct: 34 KSTALQALLLIS---QMVSGRHGDVSAA--LNGELVRMGTPGDVLRSDGSKEIKIGIETV 88
Query: 123 HAKGQWPLPPS 91
K QW L PS
Sbjct: 89 EQKIQWTLVPS 99
>tr|B0EKK1|B0EKK1_ENTDI Putative uncharacterized protein
OS=Entamoeba dispar SAW760 GN=EDI_344200 PE=4 SV=1
Length = 1471
Score = 33.1 bits (74), Expect = 7.1
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -2
Query: 363 VATMCQLYNQYLHICTKRPQKYTALPAAIGTTFTWAMKTSRPGEIDYAVYLQYNIVRMGT 184
V T+ L +++ I K KY A IG W + P E +Y + + I+++ T
Sbjct: 128 VETLVPLLARFVSISAKIGLKYAAKERTIGVVQRWIQGCNNPKESNYWMKEIHEILKLLT 187
Query: 183 PNPTYIAAGEMLTKVI 136
P+ EM+ ++I
Sbjct: 188 PHALEDMMNEMMKELI 203
|