BP920525
Clone id YMU001_000138_B10
Library
Length 609
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGCTTTTGCTTTATAGCCTGGTGGATGAAAAAATACAAAGAGTGCCACTCAATGGTGGAG
ATCAGAAAATCTTTACACAATTCAACAACTAATACACCTATAAGCTCTCCCTCATCAACT
TATCATCATAATCGAACAGGCAAACTATAATTTTGAAACACTCGTATCTCCCCTCCGGAA
CCACCGGTCACTATGACAAGACCCCATGCTGATGCCATTGAGGCCAGATTGGCATGTTCC
ACTGAGAGCCGCATCCTTGTGTTGACCATGTGTTGGTGGATATTGTTTAAGGGAAAGAAG
CTTCTCTTCTGGCCATGTTGCAGATCCTTTGCAGTCTGAAAAGAACCCATTACTCCCAAT
ATGTTGTGCTGACACGCAATTTGAAAGCAAGGAACTTCTACAACAGCTATCTCGGTAGGC
ATCTAGCCTCGGAGGTTTGGAGGTAGAATCAAACCTCAGAGGTGTTGTAGGCCTTGTGAC
AACTTCAGAAAACTCCACATCTTGAAGATCAGACAAACTAGAAATTAAGTTTATCAAACC
TGCCGGTCTTTCTATAGCTCCTGTGCTTGACATGTTGCCAAACTCTGCACCATCAGACAA
TGATCTCTC
■■Homology search results ■■ -
sp_hit_id Q8JZQ5
Definition sp|Q8JZQ5|ABP1_MOUSE Amiloride-sensitive amine oxidase [copper-containing] OS=Mus musculus
Align length 38
Score (bit) 31.6
E-value 3.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920525|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_B10.
(609 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8JZQ5|ABP1_MOUSE Amiloride-sensitive amine oxidase [copper-c... 32 3.3
sp|Q0VQV5|PPNK_ALCBS Probable inorganic polyphosphate/ATP-NAD ki... 31 4.3
sp|P36633|ABP1_RAT Amiloride-sensitive amine oxidase [copper-con... 31 5.6
sp|P19801|ABP1_HUMAN Amiloride-sensitive amine oxidase [copper-c... 30 7.4

>sp|Q8JZQ5|ABP1_MOUSE Amiloride-sensitive amine oxidase
[copper-containing] OS=Mus musculus GN=Abp1 PE=2 SV=1
Length = 751

Score = 31.6 bits (70), Expect = 3.3
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2

Query: 353 VMGSFQTAKDLQHGQKRSFFPLNNIHQHMVNTRMRLSV 240
V +F T + L+HG + L NIH H+V+ R+ L V
Sbjct: 485 VHATFYTPEGLRHGTRLQTHLLGNIHTHLVHYRVDLDV 522


>sp|Q0VQV5|PPNK_ALCBS Probable inorganic polyphosphate/ATP-NAD
kinase OS=Alcanivorax borkumensis (strain SK2 / ATCC
700651 / DSM 11573) GN=ppnK PE=3 SV=1
Length = 300

Score = 31.2 bits (69), Expect = 4.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2

Query: 281 IHQHMVNTRMRLSVEHANLASMASAWGLVIVTGGSG---GEIRVFQNYSLPV 135
+ +H++ + ++ A+ + M A LVIV GG G G R Y +PV
Sbjct: 44 LDKHIIGHLPEMGLQAASASQMGEACDLVIVVGGDGSLLGAARTLARYKVPV 95


>sp|P36633|ABP1_RAT Amiloride-sensitive amine oxidase
[copper-containing] OS=Rattus norvegicus GN=Abp1 PE=2
SV=1
Length = 746

Score = 30.8 bits (68), Expect = 5.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2

Query: 353 VMGSFQTAKDLQHGQKRSFFPLNNIHQHMVNTRMRLSV 240
V +F T + L+HG + L NIH H+V+ R+ + V
Sbjct: 480 VHATFYTPEGLRHGTRLQTHLLGNIHTHLVHYRVDMDV 517


>sp|P19801|ABP1_HUMAN Amiloride-sensitive amine oxidase
[copper-containing] OS=Homo sapiens GN=ABP1 PE=1 SV=3
Length = 751

Score = 30.4 bits (67), Expect = 7.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2

Query: 353 VMGSFQTAKDLQHGQKRSFFPLNNIHQHMVNTRMRLSV 240
V +F T + L+HG + + NIH H+V+ R+ L V
Sbjct: 485 VHATFYTPEGLRHGTRLHTHLIGNIHTHLVHYRVDLDV 522


tr_hit_id A9TQH8
Definition tr|A9TQH8|A9TQH8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 35
Score (bit) 51.6
E-value 7.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920525|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_B10.
(609 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TQH8|A9TQH8_PHYPA Predicted protein OS=Physcomitrella paten... 52 7e-10
tr|A7P1I9|A7P1I9_VITVI Chromosome chr19 scaffold_4, whole genome... 50 1e-09
tr|B8ASC7|B8ASC7_ORYSI Putative uncharacterized protein OS=Oryza... 49 3e-08
tr|Q7XS41|Q7XS41_ORYSJ OSJNBa0074L08.11 protein OS=Oryza sativa ... 49 3e-08
tr|A9TFC5|A9TFC5_PHYPA Predicted protein (Fragment) OS=Physcomit... 51 3e-08
tr|A9S405|A9S405_PHYPA Predicted protein OS=Physcomitrella paten... 51 3e-08
tr|Q9LDG7|Q9LDG7_ARATH WD-40 repeat protein-like (AT3g15470/MJK1... 48 1e-07
tr|A5AKI0|A5AKI0_VITVI Putative uncharacterized protein OS=Vitis... 43 3e-07
tr|Q9FK21|Q9FK21_ARATH Similarity to WD-containing protein OS=Ar... 49 5e-07
tr|A7QB92|A7QB92_VITVI Chromosome chr4 scaffold_73, whole genome... 47 1e-06
tr|B6SVA8|B6SVA8_MAIZE Protein phosphatase type 2A regulator/ si... 42 2e-06
tr|A7QWG6|A7QWG6_VITVI Chromosome undetermined scaffold_203, who... 43 5e-06
tr|B4FFW3|B4FFW3_MAIZE Putative uncharacterized protein OS=Zea m... 49 7e-06
tr|Q9FJD3|Q9FJD3_ARATH Similarity to unknown protein (Putative u... 46 1e-05
tr|Q3E971|Q3E971_ARATH Uncharacterized protein At5g24320.2 OS=Ar... 42 1e-05
tr|Q0JAY4|Q0JAY4_ORYSJ Os04g0568400 protein OS=Oryza sativa subs... 38 1e-05
tr|Q9FNF0|Q9FNF0_ARATH Similarity to unknown protein OS=Arabidop... 42 1e-05
tr|Q01JP7|Q01JP7_ORYSA OSIGBa0139P06.1 protein (OSIGBa0103M18.5 ... 38 1e-05
tr|B8AT38|B8AT38_ORYSI Putative uncharacterized protein OS=Oryza... 38 1e-05
tr|Q7F9S6|Q7F9S6_ORYSJ OSJNBb0032E06.1 protein OS=Oryza sativa s... 38 1e-05
tr|B6U7W0|B6U7W0_MAIZE Signal transducer OS=Zea mays PE=2 SV=1 52 3e-05
tr|B4FG57|B4FG57_MAIZE Putative uncharacterized protein OS=Zea m... 52 3e-05
tr|A7QF05|A7QF05_VITVI Chromosome chr16 scaffold_86, whole genom... 40 3e-05
tr|Q7FAN9|Q7FAN9_ORYSJ Os04g0678300 protein OS=Oryza sativa subs... 49 4e-05
tr|B8ARG9|B8ARG9_ORYSI Putative uncharacterized protein OS=Oryza... 49 4e-05
tr|A3AYN3|A3AYN3_ORYSJ Putative uncharacterized protein OS=Oryza... 49 4e-05
tr|Q259C8|Q259C8_ORYSA H0801D08.5 protein (H0402C08.15 protein) ... 49 4e-05
tr|Q9SGV4|Q9SGV4_ARATH F1N19.18 OS=Arabidopsis thaliana PE=4 SV=1 39 7e-05
tr|Q8VZK1|Q8VZK1_ARATH Putative uncharacterized protein At1g6461... 39 7e-05
tr|Q9FHY2|Q9FHY2_ARATH Similarity to unknown protein OS=Arabidop... 39 9e-05

>tr|A9TQH8|A9TQH8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_224465 PE=4 SV=1
Length = 635

Score = 51.6 bits (122), Expect(2) = 7e-10
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2

Query: 233 ANLASMASAWGLVIVTGGSGGEIRVFQNYSLPVRL 129
A+LA++++AWGLVIVT G GG I FQNY PVRL
Sbjct: 601 ADLATVSAAWGLVIVTAGLGGNITTFQNYGFPVRL 635



Score = 34.7 bits (78), Expect(2) = 7e-10
Identities = 41/127 (32%), Positives = 51/127 (40%), Gaps = 6/127 (4%)
Frame = -1

Query: 585 EFGNMSSTGAIERPAGLINLISSLS-DLQDVEFSEVVTRPTTPLRFDSTSKPPRLDAYRD 409
EF + + AI P + SSLS + V+ S V P+ PL D+ P
Sbjct: 489 EFTSRYVSVAISWPGSSTHHNSSLSRNTSQVDVSSKVFGPSPPL--DARQSSP------- 539

Query: 408 SCCRSSLLSNCVSAQHIGSNGFF--SDCKGSATWPEEKLLSLKQY---PPTHGQHKDAAL 244
S + C S FF S KGSATWPEEKL + + PT Q
Sbjct: 540 ----SHMQQRCTS--------FFLESGPKGSATWPEEKLSTFNKQVSSTPTMTQSASIGS 587

Query: 243 SGTCQSG 223
S T SG
Sbjct: 588 SMTAHSG 594


>tr|A7P1I9|A7P1I9_VITVI Chromosome chr19 scaffold_4, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027633001
PE=4 SV=1
Length = 769

Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -2

Query: 263 NTRMRLSVEHANLASMASAWGLVIVTGGSGGEIRVFQNYSLPVRL 129
NT SV+ AN SAWG+VIVT G GEIR FQN+ LPVR+
Sbjct: 729 NTSPHASVDFAN----GSAWGMVIVTAGLRGEIRTFQNFGLPVRI 769



Score = 35.4 bits (80), Expect(2) = 1e-09
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -1

Query: 408 SCCRSSLLSNCVSAQHIGSNGFFSDCKGSATWPEEKLL 295
S C SS L+ +S+ +NG+F D + SATWPEEKLL
Sbjct: 691 SVCTSSPLNGTISS---ATNGYFFD-RISATWPEEKLL 724


>tr|B8ASC7|B8ASC7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_16737 PE=4 SV=1
Length = 770

Score = 48.5 bits (114), Expect(2) = 3e-08
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -2

Query: 233 ANLASMASAWGLVIVTGGSGGEIRVFQNYSLPVRL 129
A A SAWGLVIVT G GG+IR FQN+ PVR+
Sbjct: 736 AGQAPSRSAWGLVIVTAGRGGQIRAFQNFGFPVRV 770



Score = 32.3 bits (72), Expect(2) = 3e-08
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1

Query: 378 CVSAQHIGSNGFFSDCKGSATWPEEKLLSLKQYPPT 271
C+S + ++ S + SATWPEE + KQ PP+
Sbjct: 693 CLSGNGLSTSSNHSGDRTSATWPEELMTPSKQSPPS 728


>tr|Q7XS41|Q7XS41_ORYSJ OSJNBa0074L08.11 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0074L08.11 PE=4 SV=2
Length = 767

Score = 48.5 bits (114), Expect(2) = 3e-08
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -2

Query: 233 ANLASMASAWGLVIVTGGSGGEIRVFQNYSLPVRL 129
A A SAWGLVIVT G GG+IR FQN+ PVR+
Sbjct: 733 AGQAPSRSAWGLVIVTAGRGGQIRAFQNFGFPVRV 767



Score = 32.3 bits (72), Expect(2) = 3e-08
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1

Query: 378 CVSAQHIGSNGFFSDCKGSATWPEEKLLSLKQYPPT 271
C+S + ++ S + SATWPEE + KQ PP+
Sbjct: 690 CLSGNGLSTSSNHSGDRTSATWPEELMTPSKQSPPS 725


>tr|A9TFC5|A9TFC5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_144791 PE=4 SV=1
Length = 666

Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = -2

Query: 233 ANLASMASAWGLVIVTGGSGGEIRVFQNYSLPVRL 129
++L ++++AWGLVIVT G GGEI FQNY PVRL
Sbjct: 632 SDLVNVSAAWGLVIVTAGLGGEITTFQNYGFPVRL 666



Score = 30.0 bits (66), Expect(2) = 3e-08
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = -1

Query: 345 FFSDCKGSATWPEEKLLSLKQYPPTHGQHKDAALSGTCQSGLNG 214
FF + +GS TWPEEKL SL+ P+ Q +A + S LNG
Sbjct: 586 FFPE-RGSTTWPEEKLDSLRMSRPSMMQ---SASIVSNMSDLNG 625


>tr|A9S405|A9S405_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_74281 PE=4 SV=1
Length = 328

Score = 51.2 bits (121), Expect(2) = 3e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -2

Query: 230 NLASMASAWGLVIVTGGSGGEIRVFQNYSLPVRL 129
+LA +++AWGLVIVT G GGEI FQNY PVRL
Sbjct: 295 DLAPVSAAWGLVIVTAGLGGEITAFQNYGFPVRL 328



Score = 29.6 bits (65), Expect(2) = 3e-08
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1

Query: 330 KGSATWPEEKLLSLKQYPPTHGQ 262
+G+ATWPEEKL SL+ P Q
Sbjct: 255 RGTATWPEEKLDSLRMTRPNMTQ 277


>tr|Q9LDG7|Q9LDG7_ARATH WD-40 repeat protein-like
(AT3g15470/MJK13_13) (MJK13.13 protein) OS=Arabidopsis
thaliana GN=MJK13.13 PE=2 SV=1
Length = 883

Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = -2

Query: 248 LSVEHANLASMASAWGLVIVTGGSGGEIRVFQNYSLPVRL 129
+S + N +++++WG+VIVT G GEIR FQN+ LP+R+
Sbjct: 844 MSSSNGNSGNVSASWGMVIVTAGLRGEIRTFQNFGLPIRI 883



Score = 30.4 bits (67), Expect(2) = 1e-07
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1

Query: 354 SNGFFSDCKGSATWPEEKLL 295
+NG+F D + SATWPEEKLL
Sbjct: 812 TNGYFFD-RMSATWPEEKLL 830


>tr|A5AKI0|A5AKI0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_019124 PE=4 SV=1
Length = 717

Score = 43.1 bits (100), Expect(2) = 3e-07
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2

Query: 209 AWGLVIVTGGSGGEIRVFQNYSLPVR 132
AWGLVIVT G G IR FQNY LP+R
Sbjct: 691 AWGLVIVTAGWDGRIRSFQNYGLPIR 716



Score = 34.3 bits (77), Expect(2) = 3e-07
Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
Frame = -1

Query: 351 NGFFSDC--KGSATWPEEKLLS 292
+GFFS+ KGSATWPEEKLL+
Sbjct: 639 HGFFSESLPKGSATWPEEKLLT 660


>tr|Q9FK21|Q9FK21_ARATH Similarity to WD-containing protein
OS=Arabidopsis thaliana GN=At5g54200 PE=4 SV=1
Length = 825

Score = 48.9 bits (115), Expect(2) = 5e-07
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Frame = -2

Query: 275 QHMVNTRMRLSVEHANLA----SMASAWGLVIVTGGSGGEIRVFQNYSLPVRL 129
++ T R+SV+ +N+ ASAW +VIVTG GEIR+FQN+ PVRL
Sbjct: 773 KNRARTSPRVSVDMSNIQVNTKPSASAWSMVIVTGSLRGEIRIFQNFGFPVRL 825



Score = 27.7 bits (60), Expect(2) = 5e-07
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -1

Query: 453 FDSTSKPPRLDAYRDSCCRSSLLSNCVSAQHIGSNGFFSDCKGSATWPEEKLL 295
F + + PP D ++ + +S+ +N +F D + SATWPEEKLL
Sbjct: 723 FTANNNPPT--PVNDPTNNKTVTNGIISS---ATNRYFFD-RVSATWPEEKLL 769


>tr|A7QB92|A7QB92_VITVI Chromosome chr4 scaffold_73, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034856001
PE=4 SV=1
Length = 659

Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = -2

Query: 278 HQHMVNTRMRLSVEHANLASMASAWGLVIVTGGSGGEIRVFQNYSLPVRL 129
H H + V++ N +++ AWGLVI T G G IR F NY LPVRL
Sbjct: 611 HDHQ-QQQQHNDVQNHNHLALSEAWGLVIATAGWDGTIRTFHNYGLPVRL 659



Score = 28.9 bits (63), Expect(2) = 1e-06
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1

Query: 333 CKGSATWPEEKL 298
C+G ATWPEEKL
Sbjct: 587 CRGGATWPEEKL 598