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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920533
Clone id YMU001_000138_C08
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCATGTAGGTGTGTGCTGCAGGAGTCATGGCAACGGTAGCGAACAAAGAGGCAAGATGGT
ACGTTCTGGGTGACGCACAGCAAAATTATGGTCCCTATACTGCGGAGGAGTTGCAAGATC
ATTTTGCATCTGGGTATCTTACGGGCAGCTCATTGCTGTGGGCGGAAGGGAGGCCTGAAT
GGTGTCCTTTGTCTGCCATCGATGAACTCAAGACACTGGTTGTAATCCAAAACCCAGCAG
TGCACCAGTCGCCCCTTCCTTCTTGTCAAATAAAGTAAGAGCTACCCTTGCCCACAGGGA
ACGAAGAGGAAGACTTCTTGAGATGGCAGGAAGAGATTAGGAAAGCGGAACAAGAGCAGG
CTCGCTTGAAGTCAGGTAAAGGTAGAGGTGGCGGTAAAACTGCACCGGTCGTTTATGCAG
AGAAACCTCCCACTGAGCTAATAGAAAAAGAGGAAGACAGGACTCTTCAAAGATTCCATA
AATGAACTGAGTACCTGCAGGTAA
■■Homology search results ■■ -
sp_hit_id O75165
Definition sp|O75165|DJC13_HUMAN DnaJ homolog subfamily C member 13 OS=Homo sapiens
Align length 65
Score (bit) 45.8
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920533|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_C08.
         (504 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O75165|DJC13_HUMAN DnaJ homolog subfamily C member 13 OS=Homo...    46   1e-04
sp|O23372|ATXR3_ARATH Probable histone-lysine N-methyltransferas...    30   6.4  
sp|Q2MKA7|RSPO1_HUMAN R-spondin-1 OS=Homo sapiens GN=RSPO1 PE=2 ...    30   8.4  

>sp|O75165|DJC13_HUMAN DnaJ homolog subfamily C member 13 OS=Homo
            sapiens GN=DNAJC13 PE=1 SV=4
          Length = 2243

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +3

Query: 48   EARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDELKTLVVI 227
            E  WY     ++  GPY   E+Q+ +  G L   +  WA+G   W PL +I +LK  ++ 
Sbjct: 973  EKEWYFGNADKERSGPYGFHEMQELWTKGMLNAKTRCWAQGMDGWRPLQSIPQLKWCLLA 1032

Query: 228  QNPAV 242
               AV
Sbjct: 1033 SGQAV 1037


>sp|O23372|ATXR3_ARATH Probable histone-lysine N-methyltransferase
            ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=1 SV=1
          Length = 2351

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 57   WYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAI 200
            W+    A Q  GP +  ELQ     G++   S ++ +    W P+++I
Sbjct: 900  WFYTDGAGQEQGPLSFSELQKLVEKGFIKSHSSVFRKSDKIWVPVTSI 947


>sp|Q2MKA7|RSPO1_HUMAN R-spondin-1 OS=Homo sapiens GN=RSPO1 PE=2
           SV=1
          Length = 263

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 229 KTQQCTSRPFLLVK*SKSYPCPQGTKRKTS*DGRKRLGKRNKSR 360
           +T++CT R           PCP+G KR+    GR+    RN +R
Sbjct: 195 ETRRCTVR---------RVPCPEGQKRRKGGQGRRENANRNLAR 229
tr_hit_id A7R292
Definition tr|A7R292|A7R292_VITVI Chromosome undetermined scaffold_409, whole genome shotgun sequence OS=Vitis vinifera
Align length 101
Score (bit) 94.0
E-value 4.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920533|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_C08.
         (504 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7R292|A7R292_VITVI Chromosome undetermined scaffold_409, who...    94   4e-18
tr|Q9LF02|Q9LF02_ARATH Putative uncharacterized protein T21H19_1...    93   8e-18
tr|Q6RZU2|Q6RZU2_MUSAC Putative RNA-binding protein (Fragment) O...    89   9e-17
tr|B4FUI9|B4FUI9_MAIZE Putative uncharacterized protein OS=Zea m...    87   3e-16
tr|Q84PA0|Q84PA0_ORYSJ Putative RNA-binding domain protein (Frag...    83   8e-15
tr|Q7XQI1|Q7XQI1_ORYSJ Os04g0496400 protein OS=Oryza sativa subs...    83   8e-15
tr|Q01ID4|Q01ID4_ORYSA OSIGBa0092E01.1 protein (H0306B06.5 prote...    83   8e-15
tr|A2XV42|A2XV42_ORYSI Putative uncharacterized protein OS=Oryza...    83   8e-15
tr|Q9FEL5|Q9FEL5_TOBAC Putative uncharacterized protein (Fragmen...    78   3e-13
tr|A7R6M7|A7R6M7_VITVI Chromosome undetermined scaffold_1337, wh...    65   2e-09
tr|A7R5K7|A7R5K7_VITVI Chromosome undetermined scaffold_993, who...    65   2e-09
tr|Q4S1H1|Q4S1H1_TETNG Chromosome 6 SCAF14768, whole genome shot...    49   1e-04
tr|Q1D8Q4|Q1D8Q4_MYXXD Putative uncharacterized protein OS=Myxoc...    49   1e-04
tr|B6PL58|B6PL58_BRAFL Putative uncharacterized protein OS=Branc...    48   3e-04
tr|Q47L21|Q47L21_THEFY Putative uncharacterized protein OS=Therm...    47   4e-04
tr|B4SNS4|B4SNS4_STRM5 Putative uncharacterized protein OS=Steno...    47   7e-04
tr|A9V6U0|A9V6U0_MONBE Predicted protein OS=Monosiga brevicollis...    47   7e-04
tr|A9UQT9|A9UQT9_MONBE Predicted protein OS=Monosiga brevicollis...    46   9e-04
tr|A7E2Y5|A7E2Y5_HUMAN DnaJ (Hsp40) homolog, subfamily C, member...    46   0.001
tr|A6DT81|A6DT81_9BACT Putative uncharacterized protein OS=Lenti...    45   0.001
tr|A4CIK3|A4CIK3_9FLAO Putative uncharacterized protein OS=Robig...    45   0.003
tr|B0RWR2|B0RWR2_XANCB PilA-related fimbrial protein OS=Xanthomo...    44   0.004
tr|B2EQH8|B2EQH8_9BACT Putative uncharacterized protein OS=bacte...    44   0.006
tr|B8L8E2|B8L8E2_9GAMM RDD family protein OS=Stenotrophomonas sp...    42   0.013
tr|B8L770|B8L770_9GAMM Putative uncharacterized protein OS=Steno...    42   0.013
tr|A3XQK4|A3XQK4_9FLAO Putative uncharacterized protein OS=Leeuw...    42   0.013
tr|B2FIR8|B2FIR8_STRMK Putative fimbrial protein (Pilin) OS=Sten...    42   0.016
tr|B7YSP8|B7YSP8_VARPD Putative uncharacterized protein OS=Vario...    42   0.016
tr|Q4Q772|Q4Q772_LEIMA Endosomal trafficking protein RME-8, puta...    42   0.016
tr|B4D956|B4D956_9BACT Putative uncharacterized protein OS=Chtho...    41   0.028

>tr|A7R292|A7R292_VITVI Chromosome undetermined scaffold_409, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00012873001 PE=4 SV=1
          Length = 253

 Score = 94.0 bits (232), Expect = 4e-18
 Identities = 47/101 (46%), Positives = 64/101 (63%)
 Frame = +3

Query: 48  EARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDELKTLVVI 227
           E  WY+LG+ QQN GPY   EL++HF +GYL+ +SLLW+EGR +W PLS+I EL T   I
Sbjct: 9   EVGWYILGENQQNLGPYAFSELREHFLNGYLSENSLLWSEGRSDWQPLSSIPELTT--AI 66

Query: 228 QNPAVHQSPLPSCQIK*ELPLPTGNEEEDFLRWQEEIRKAE 350
             P V  S             P  N+E++F +WQ+E+R+AE
Sbjct: 67  SQPGVDCSSAG----------PPINDEDEFEKWQKEVREAE 97


>tr|Q9LF02|Q9LF02_ARATH Putative uncharacterized protein T21H19_180
           (Putative uncharacterized protein At5g16260) (At5g16260)
           OS=Arabidopsis thaliana GN=T21H19_180 PE=2 SV=1
          Length = 519

 Score = 92.8 bits (229), Expect = 8e-18
 Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 8/121 (6%)
 Frame = +3

Query: 30  ATVANKEARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDEL 209
           ATVA  +  WY+LG+ QQN GPYT  EL +HF +GYL  ++L+WA+GR EW PLSAI +L
Sbjct: 16  ATVAATDVGWYILGENQQNLGPYTFSELCNHFRNGYLLETTLVWADGRSEWQPLSAIPDL 75

Query: 210 KTLV---VIQNPAVHQSPL-----PSCQIK*ELPLPTGNEEEDFLRWQEEIRKAEQEQAR 365
            + +    I  PAV  S L        + + +    + + E++F +WQ EI+ AE E  R
Sbjct: 76  MSRISGAEIAYPAVGSSGLINGSNAGTRQEKQDYTASASTEDEFEKWQREIKDAEAEAER 135

Query: 366 L 368
           L
Sbjct: 136 L 136


>tr|Q6RZU2|Q6RZU2_MUSAC Putative RNA-binding protein (Fragment)
           OS=Musa acuminata GN=H9-12 PE=4 SV=1
          Length = 308

 Score = 89.4 bits (220), Expect = 9e-17
 Identities = 42/101 (41%), Positives = 63/101 (62%)
 Frame = +3

Query: 48  EARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDELKTLVVI 227
           E  WY+LG+ Q++ GPY   ELQ+HFA+GY++ ++LLW EGR EW PLS+I EL     I
Sbjct: 14  EVGWYILGENQEHVGPYALSELQEHFANGYISENTLLWYEGRSEWAPLSSIPELYAGTPI 73

Query: 228 QNPAVHQSPLPSCQIK*ELPLPTGNEEEDFLRWQEEIRKAE 350
           +      + LP             +E++DF +WQ+E+++AE
Sbjct: 74  KKLDGSAADLP-------------DEDDDFAKWQKEVQEAE 101


>tr|B4FUI9|B4FUI9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 460

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 44/109 (40%), Positives = 64/109 (58%)
 Frame = +3

Query: 30  ATVANKEARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDEL 209
           A  A  EA WYVLG  Q+  GPY   EL++HFA+GY   S++LWAEGR EW PLS+I EL
Sbjct: 6   APAAATEAGWYVLGPNQEGVGPYALAELREHFANGYFNESTMLWAEGRKEWMPLSSISEL 65

Query: 210 KTLVVIQNPAVHQSPLPSCQIK*ELPLPTGNEEEDFLRWQEEIRKAEQE 356
            + V  ++ +   +P               + ++DF ++Q+E+ +AE E
Sbjct: 66  HSAVAAKDQSEQDAP---------------DVDDDFEKFQKEVIEAETE 99


>tr|Q84PA0|Q84PA0_ORYSJ Putative RNA-binding domain protein
           (Fragment) OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 286

 Score = 82.8 bits (203), Expect = 8e-15
 Identities = 42/103 (40%), Positives = 61/103 (59%)
 Frame = +3

Query: 48  EARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDELKTLVVI 227
           E  WYVLG  Q++ GPY   EL++HFA+GY++ SS+LWAEGR EW PLS+I +L  +V  
Sbjct: 6   EVGWYVLGPNQEHVGPYALSELREHFANGYISESSMLWAEGRSEWMPLSSIPDLLAVVTK 65

Query: 228 QNPAVHQSPLPSCQIK*ELPLPTGNEEEDFLRWQEEIRKAEQE 356
           ++                   P    E+DF ++Q+E+ +AE E
Sbjct: 66  KDQ------------------PDEGIEDDFDKFQKEVIEAEAE 90


>tr|Q7XQI1|Q7XQI1_ORYSJ Os04g0496400 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0067K08.9 PE=4 SV=2
          Length = 476

 Score = 82.8 bits (203), Expect = 8e-15
 Identities = 42/103 (40%), Positives = 61/103 (59%)
 Frame = +3

Query: 48  EARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDELKTLVVI 227
           E  WYVLG  Q++ GPY   EL++HFA+GY++ SS+LWAEGR EW PLS+I +L  +V  
Sbjct: 6   EVGWYVLGPNQEHVGPYALSELREHFANGYISESSMLWAEGRSEWMPLSSIPDLLAVVTK 65

Query: 228 QNPAVHQSPLPSCQIK*ELPLPTGNEEEDFLRWQEEIRKAEQE 356
           ++                   P    E+DF ++Q+E+ +AE E
Sbjct: 66  KDQ------------------PDEGIEDDFDKFQKEVIEAEAE 90


>tr|Q01ID4|Q01ID4_ORYSA OSIGBa0092E01.1 protein (H0306B06.5 protein)
           OS=Oryza sativa GN=OSIGBa0092E01.1 PE=4 SV=1
          Length = 476

 Score = 82.8 bits (203), Expect = 8e-15
 Identities = 42/103 (40%), Positives = 61/103 (59%)
 Frame = +3

Query: 48  EARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDELKTLVVI 227
           E  WYVLG  Q++ GPY   EL++HFA+GY++ SS+LWAEGR EW PLS+I +L  +V  
Sbjct: 6   EVGWYVLGPNQEHVGPYALSELREHFANGYISESSMLWAEGRSEWMPLSSIPDLLAVVTK 65

Query: 228 QNPAVHQSPLPSCQIK*ELPLPTGNEEEDFLRWQEEIRKAEQE 356
           ++                   P    E+DF ++Q+E+ +AE E
Sbjct: 66  KDQ------------------PDEGIEDDFDKFQKEVIEAEAE 90


>tr|A2XV42|A2XV42_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16479 PE=4 SV=1
          Length = 476

 Score = 82.8 bits (203), Expect = 8e-15
 Identities = 42/103 (40%), Positives = 61/103 (59%)
 Frame = +3

Query: 48  EARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDELKTLVVI 227
           E  WYVLG  Q++ GPY   EL++HFA+GY++ SS+LWAEGR EW PLS+I +L  +V  
Sbjct: 6   EVGWYVLGPNQEHVGPYALSELREHFANGYISESSMLWAEGRSEWMPLSSIPDLLAVVTK 65

Query: 228 QNPAVHQSPLPSCQIK*ELPLPTGNEEEDFLRWQEEIRKAEQE 356
           ++                   P    E+DF ++Q+E+ +AE E
Sbjct: 66  KDQ------------------PDEGIEDDFDKFQKEVIEAEAE 90


>tr|Q9FEL5|Q9FEL5_TOBAC Putative uncharacterized protein (Fragment)
           OS=Nicotiana tabacum PE=2 SV=1
          Length = 242

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 39/102 (38%), Positives = 62/102 (60%)
 Frame = +3

Query: 57  WYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDELKTLVVIQNP 236
           WYVL   QQ  GPYT  EL++H+++GYL  ++L+W+EGR +W PL +I  L T V     
Sbjct: 32  WYVLAQDQQQLGPYTIPELREHYSAGYLLENTLVWSEGRSDWQPLCSIPGLLTDV----- 86

Query: 237 AVHQSPLPSCQIK*ELPLPTGNEEEDFLRWQEEIRKAEQEQA 362
                P  S      +PL + +  +++ ++Q+E+++AE EQA
Sbjct: 87  -----PEQSIDGTNSVPLTSNDPLDEYEKFQKEVKEAEDEQA 123


>tr|A7R6M7|A7R6M7_VITVI Chromosome undetermined scaffold_1337, whole
           genome shotgun sequence (Fragment) OS=Vitis vinifera
           GN=GSVIVT00008282001 PE=4 SV=1
          Length = 153

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 38/101 (37%), Positives = 52/101 (51%)
 Frame = +3

Query: 48  EARWYVLGDAQQNYGPYTAEELQDHFASGYLTGSSLLWAEGRPEWCPLSAIDELKTLVVI 227
           E  WY+LG+ QQN GPY   EL++HF +G              +W PLS+I EL T   I
Sbjct: 25  EVGWYILGENQQNLGPYAFSELREHFLNG-------------SDWQPLSSIPELTT--AI 69

Query: 228 QNPAVHQSPLPSCQIK*ELPLPTGNEEEDFLRWQEEIRKAE 350
             P V  S             P  N+E++F +WQ+E+R+AE
Sbjct: 70  SQPGVDCSSAG----------PPINDEDEFEKWQKEVREAE 100